Array 1 509699-509199 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLER010000001.1 Elizabethkingia anophelis strain EA12 NODE_1_length_683880_cov_139.839604, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================= ================== 509698 38 100.0 39 ...................................... TAACACAACAGAAGTTTGGAGATTATTTCAATAGACTTT 509621 38 100.0 39 ...................................... TAACACAACAATCAGTAATGTATTGGATTCTTTCCATGA 509544 38 100.0 39 ...................................... TAACACAACCAACACTGTAGATGCTGATTATGCTCTTAA 509467 38 100.0 39 ...................................... TAACACAACACAACTCAAATCGTATATAACATTGCTGAG 509390 38 100.0 39 ...................................... TAACACAACTTTATCAGTCTCTACCAACTTCTAACAATT 509313 38 100.0 39 ...................................... TAACACAACAATCCGGAAAACGCAATTGATGAAGCAATG 509236 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ======================================= ================== 7 38 100.0 39 GTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATA # Left flank : AGAAATTTTCAGCCCGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACAATCCCAAACGCCCCAATGTTCGACACTTCGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACTTATAAGGTTGCAAGGAATAAGAATGTCAAGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACACACTACAACCGAAAAAAAGCCCGTAATAAGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACTGAAGCATTCGGGTCCCATGTTTCACCTGGGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACTGAAGCATTCGGGTCCCATGTTTCACCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TAACACAACCTCAAAATTTAATCCGTTGAAAATCAACGGATTTTATTATTTTTTAGAATTTAAAAATCAGAATAATTCCAACTGTTGAAAGGTCGGCGGTGGTTCTTCTTTATTTCTGGCGAAGAAAATTTCAATATCACCAAACTGTTTGTCGGTAATACACATAATAGCAACTTTTCCAGCTTTAGGCAACATGACTTTTACCCTTTTGATGTGGACCTCTGCGTTTTCTCTACTGGGACAGTGGCGGATATACATTGAAAACTGAAAAAGCGAAAAGCCATCATCTAACAGACGTTTACGAAATAGATTGGCATCCCGCATATTTTCCTTTGTTTCGGTTGGTAAATCATAAAGTACTAGAACCCACATAATCCGGTAAGCATTAAACCTTTCGGCTTTCATATCAGTTCAGGATAAGCAATCAAACGTTTTTCTCCTGTATAACATTTATATAGTGATGATGCTGTTGTTTTTACAGCCACCAGCAAAGGTCTGGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.77,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], // Array 2 511493-509838 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLER010000001.1 Elizabethkingia anophelis strain EA12 NODE_1_length_683880_cov_139.839604, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================= ================== 511492 38 100.0 39 ...................................... TAACACAACGAACTTCCCTTTTTGAACGTGATTATTTTC 511415 38 100.0 39 ...................................... TAACACAACTGAGAGTTAAACAACCGGAGGCGTTCGACC 511338 38 100.0 39 ...................................... TAACACAACTGGAACCTTAATGCAGGATATTAACGGGCT 511261 38 100.0 39 ...................................... TAACACAACCAAACGCTCTTAATCTTCATGAGGAGCTTA 511184 38 100.0 39 ...................................... TAACACAACAGGCTATCGAAACTCTGGTATCAGATACCG 511107 38 100.0 39 ...................................... TAACACAACCAAAATCCGAAACACCAAAGTCTCAGGGTA 511030 38 100.0 39 ...................................... TAACACAACGGACAGCTTCCATACAGCTCATTGAGCCTC 510953 38 100.0 39 ...................................... TAACACAACTTTGCTCGATTATTAAGTGGTATAGATATG 510876 38 100.0 39 ...................................... TAACACAACCCTTCGCTTTCATTCTGCAGAACTCCTTTT 510799 38 100.0 39 ...................................... TAACACAACGAACTCAATCGAAATTACAAACGCAATTAC 510722 38 100.0 39 ...................................... TAACACAACTATTAGAATTTGGAACGCAGATACCATACA 510645 38 100.0 39 ...................................... TAACACAACACAGATCAAGCTGTAAAACTTTCTCAGTTT 510568 38 100.0 39 ...................................... TAACACAACCAAAAGGCAATTGACGATATTGATGCAGAT 510491 38 100.0 39 ...................................... TAACACAACTATAATCGTATTCCTGCGCATCCTCTGTAT 510414 38 100.0 39 ...................................... TAACACAACATCGCCGACAAAGAAGAAGCGGAAAGGGTT 510337 38 100.0 39 ...................................... TAACACAACAATACATTTTTTCGATTCCATTGCATTCTT 510260 38 100.0 39 ...................................... TAACACAACGTTCAGACTTATGGAAGAAATTTTCAGCCC 510183 38 100.0 39 ...................................... TAACACAACAATCCCAAACGCCCCAATGTTCGACACTTC 510106 38 100.0 39 ...................................... TAACACAACTTATAAGGTTGCAAGGAATAAGAATGTCAA 510029 38 100.0 39 ...................................... TAACACAACACACTACAACCGAAAAAAAGCCCGTAATAA 509952 38 100.0 39 ...................................... TAACACAACTGAAGCATTCGGGTCCCATGTTTCACCTGG 509875 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ======================================= ================== 22 38 100.0 39 GTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATA # Left flank : AATTTTAGATATCTTTGTGATATAACACAACATTTTTTTTGTAAGGATATTCTAAGTCTTAGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACCTCTTTCATCTTTTGCAGATACAAATTCTAGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACCGAATTCTTTAGGCTTATCTTTGCTTTTTCCGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACCAACTTAAGCTATTTAACAGATGGGTTATTGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACCGAATTCTTTAGGCTTATCTTTGCTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTTAAGCTATTTAACAGATGGGTTATT # Right flank : TAACACAACTGAAGCATTCGGGTCCCATGTTTCACCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACAGAAGTTTGGAGATTATTTCAATAGACTTTGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACAATCAGTAATGTATTGGATTCTTTCCATGAGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACCAACACTGTAGATGCTGATTATGCTCTTAAGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACACAACTCAAATCGTATATAACATTGCTGAGGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACTTTATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [23.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.5,5.14 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], // Array 3 513161-511662 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACLER010000001.1 Elizabethkingia anophelis strain EA12 NODE_1_length_683880_cov_139.839604, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ======================================== ================== 513160 35 89.5 39 A....-..--............................ TAACACAACGTTTCGGTATGTTGGGTATGCTTGGAATTG 513086 38 100.0 39 ...................................... TAACACAACTAAATTGGTTGCACAGATGAACAGAGAGAC 513009 38 100.0 39 ...................................... TAACACAACGCTCCAGCAATTGGAGATCATGTATTAACG 512932 38 100.0 39 ...................................... TAACACAACCCGCCTATTAGTGCCTTAAAAGAATGGGCC 512855 38 100.0 39 ...................................... TAACACAACTCTGAAGTACCAGAAACTACCCTAAAAGCT 512778 38 100.0 39 ...................................... TAACACAACAAATCTATAAAAGTACCTCACTTCATATGC 512701 38 100.0 39 ...................................... TAACACAACCTACTCTTAATTTCACACGTTATTTTTTCA 512624 38 100.0 39 ...................................... TAACACAACTTCTATGCAATTCTGGGGTAGTGAACTATA 512547 38 100.0 39 ...................................... TAACACAACTGCTAGCAGTCTCATACCTTCTCTTTTTCT 512470 38 100.0 39 ...................................... TAACACAACTTCAAGTTCTGAAAGCTTAATAATGTTGTC 512393 38 100.0 39 ...................................... TAACACAACTATGATCCTATTTTTTATATATGGGAACCC 512316 38 100.0 39 ...................................... TAACACAACCATGCACGCCCACATGGCTATTTAGACTCG 512239 38 100.0 39 ...................................... TAACACAACCATGCACGCCCACATGGCTATTTAGACTCG 512162 38 100.0 39 ...................................... TAACACAACGAAGCACGTTTGCATGACAGGCAGGATTTA 512085 38 100.0 39 ...................................... TAACACAACGTTTCATAACATGGGAATAACGCTATTTAC 512008 38 100.0 39 ...................................... TAACACAACATTTTTTTTGTAAGGATATTCTAAGTCTTA 511931 38 100.0 39 ...................................... TAACACAACCTCTTTCATCTTTTGCAGATACAAATTCTA 511854 38 100.0 40 ...................................... TAACACAACCGAATTCTTTAGGCTTATCTTTGCTTTTTCC 511776 38 100.0 39 ...................................... TAACACAACCAACTTAAGCTATTTAACAGATGGGTTATT 511699 38 100.0 0 ...................................... | ========== ====== ====== ====== ====================================== ======================================== ================== 20 38 99.5 39 GTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATA # Left flank : CGCCGATCCACTGATCTCTGCAGGTATTGGTTTACTGATCTTCCCAAGAACATGGCGACTTCTGATGGAAGCTATTCATGTATTATTGGAAGGTACTCCTAAAGATGTAGATATTGATGAACTGCGCAGTACCATGGAAAAAGTTCCGGGTGTTAAAAGCCTGCACGACCTCCATGTATGGTCGCTAACCTCTGGTATCAATGCGATGAGCGCCCATGTTGTCTCCGATCAAAGCATTCCGCATAACCAAATGCTTCGGATACTCACCGATCAGGCGACCAGTAATTTCAAAATTAGCCATACGACCTTCCAGATCGAAGATGAAGGCTATGTCGAAAGCGAAATGCACGATTAAAATTAAAAACCTAAACCATACAAAAAAACCTTTCAGGAGTACTGAAAGGTTTTTGTTTTTTTATAATGATCTTTATCGACTAAACAGGGTTAACCACAAAAGGCTCATTATGTAAATCTAATTTACAATAAAAACACCTTAATTT # Right flank : TAACACAACCGAATTCTTTAGGCTTATCTTTGCTTTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACTTAAGCTATTTAACAGATGGGTTATTGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACGAACTTCCCTTTTTGAACGTGATTATTTTCGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACTGAGAGTTAAACAACCGGAGGCGTTCGACCGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACTGGAACCTTAATGCAGGATATTAACGGGCTGTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATATAACACAACCAAACGCTCTTAATCTTCATGAGGAGCTTAGTTGTGAATTGCTTTCAATTTTA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAATTTTAGATATCTTTGTGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.91,5.14 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //