Array 1 154207-155211 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTNB01000005.1 Escherichia coli strain 10432wC6 NODE_5_length_220190_cov_39.216, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 154207 29 100.0 32 ............................. CTGACGCAACGATTGACCGTGCCGCCGGGTTG 154268 29 100.0 32 ............................. CCGCCGTTATATGGAGCGATTCCGGTTTGGTA 154329 29 100.0 32 ............................. TATTCCCCCAGTCACCCCCGCCACCAAAATCA 154390 29 100.0 32 ............................. ATTTTTCAGACTCATCAAAATAATCCTTTAAT 154451 29 100.0 32 ............................. CGAATTTTGCACACTACGTCGCTGAGGGTAAA 154512 29 100.0 32 ............................. CATTGCCTTTGCAGCGTCTTTCCGATCATTCA 154573 29 100.0 32 ............................. AACGTGAGATACGCCTCCCAGCGGCGCTCGGT 154634 29 100.0 32 ............................. CCGTCAAACAGTATCACCGCGTTAACGCCCGC 154695 29 100.0 32 ............................. CCACACACGTCGAGCTGGTGGGGGTTAATGCT 154756 29 100.0 32 ............................. ACACCTCTACTGACGTTCCTGAACAAGAAGAT 154817 29 100.0 32 ............................. CTCTGTCGTTTTCATATTACCGGCCTGCCACT 154878 29 100.0 32 ............................. GCCAGGAATGCAGCATTTTGCATGGGAAATGA 154939 29 100.0 32 ............................. CCGATATTTTCCTGACGTCGAAAAAAGAGGAC 155000 29 100.0 32 ............................. CTGGGCGAGGGAGAAACGCCAGCGGAGCAGTA 155061 29 100.0 32 ............................. GGATCACAAGGGCGGCTATCAGGGTGGACGGA 155122 29 100.0 32 ............................. CCTCTCAATTTGTAACGTCTGCAATGTCAGGC 155183 29 96.6 0 ............................A | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.8 32 GAGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAGTTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGGATTAAGTGCTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTATAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : ACCATATAACCCGTTATCTCTTTCTCAAGTTTTTATATTAGCAGTACTTGTAATAAGCAACATATCCACGTAACACCTCATGTTCAAAATAGTTCTCCATGCCAGAGAGGTTCACAATTATCGATACAAAAAATTAAATTTAATCAAAGTGTTATTTGTATGATTCTTAAATCGTTAAGAAATTTTAATCTATTATTTTTTTAATATTGAATTAATGCCTGTTAATTTTTTCTTTAGAATAACAGTATGTTTTTTAAGCTTGTTATTCATTGGTTAAGTAATAAATCTGGAAGTTTGTCTTTGTTTTGAGGCTAATGAGTGGTTTTACATAACCGCCTCTATACGCTGTTGATGAATAGTTCTTATGAATAAAGATATCCAGTTCATACTTTAAGTGAAAATTGATAAAGTGCGATTCGTATTGTCTTTTATTCTAAAGACATCGAGTGTAGTTAATATTCCTTGTAAAAACAGGGATAAACCGAACTAGTTAAAGTTTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GAGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 180950-181954 **** Predicted by CRISPRDetect 2.4 *** >NZ_WTNB01000005.1 Escherichia coli strain 10432wC6 NODE_5_length_220190_cov_39.216, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 180950 29 100.0 32 ............................. CCTCTGCCGCACTGGCTCCTGACAGCCTCAGC 181011 29 100.0 32 ............................. AATTTTGGCAGCGTGTAAAATCCACTTTTCAG 181072 29 100.0 32 ............................. ACGACGACGGCAGCGCAGCAAACTGGCACGGG 181133 29 100.0 32 ............................. GAATACCGATTCATAACGGCGGAAATGTGGAT 181194 29 100.0 32 ............................. CCTACGCCATGTGGATTAGTCCGGCGTTTCAT 181255 29 100.0 32 ............................. CAGCTCGCAGCGCTCGGAACGTGGCGCTATAG 181316 29 100.0 32 ............................. GTTTCTCATATTTCGCGTCAATCTCCACCAGG 181377 29 100.0 32 ............................. TGGTTTGAGCCGTTTAAAGTTGAACAGGCGAC 181438 29 100.0 32 ............................. GCTTTCAGTCGAGTGGCAGCTACGAGGAATCG 181499 29 100.0 32 ............................. GCCCAGAATCTCTTTTAGCGCAACGATATTCC 181560 29 100.0 32 ............................. GCTCCGGTTTTAAAATAAACCCGGCAAAAACG 181621 29 100.0 32 ............................. TTAACGCGAAAGCGTCGGCGGTCAGTCGGCAG 181682 29 100.0 32 ............................. GCGTCTCGAGCGCGGGACGATTCAAAACCAGC 181743 29 100.0 32 ............................. CCAAAGAAGAACAACGAGCCAACTGGTTTCAG 181804 29 100.0 32 ............................. GCAATTTGTTGTCCGCGATCCGGTACGCGCGT 181865 29 100.0 32 ............................. CGGCTATGGAATTTATGGAGAAGTTTGGTTTT 181926 29 96.6 0 ............T................ | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GATATGTTACCGCCAGCCATCCCCGAACCTGAAACGTTGGGCGATAGCGGTCATCGAGGACGCGGCTGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCGCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAGCAAATTACCCAACTGGCAGGTTGTGGAAATGTGGTCATGGCCTGGGCGACAAATACTGAGTCTGGTTTTGAGTTTCAGACCTGGGGCAAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAAGTTAGACGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGTGTGTTCCCCGCGCCCGCGCCAGTAGTTCGCGTGACCCGGCTC # Right flank : GGGCGCACTGGATGCGATGATGGATATCACTTAGAATTCCCCGCCCTTGCGGTAGAACTCCCAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAGCTCCTTCACCAGCGGTAGCATTATCCGCATAACATCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGTTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCCGGGAAGGCAGGTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCAATTCCATGACTACGCGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [38.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //