Array 1 50221-48179 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALNO01000018.1 Slackia sp. CM382 contig00014, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 50220 29 100.0 32 ............................. GGACGGGTACGACGATACGCGATCGTACGACA 50159 29 96.6 32 ............................T GCCTGCTACGGCATGGCCGCGCAGGACCCCGT 50098 29 96.6 32 ............................T GAGCATGCGGGGAATCGACATATCGAACTGGA 50037 29 96.6 32 ............................T TTGTCTTTGAGCGAATCGAGGTCATCGCCCTC 49976 29 100.0 32 ............................. GAGGATCATATCTATCAGCGTATCGCGTACGA 49915 29 96.6 32 ............................T CGTATTCCTCGCCCGAGAGCTTCCCGTGCTCG 49854 29 100.0 32 ............................. TCCTCCTTTGGTTGTCGGACACGTTCATACTA 49793 29 100.0 32 ............................. TTTTTTTGATCGGCAGGATGGACATTAAGCCC 49732 29 96.6 32 ............................T TGCAGGGTCTTGCCGCCTGGTGCCGACACGAA 49671 29 100.0 32 ............................. GGCTTAAGACCAATTACAAGACCAGCGTCCGC 49610 29 100.0 32 ............................. GAACGTTCCGCCGGTAGAAATGAAACCGAACA 49549 29 100.0 32 ............................. TTCGGCGAGGTATGCGCCTGTCTCGAAGAGGA 49488 29 100.0 32 ............................. TCCGCCGACCAGATGGCCGCGTTCTGCAACAA 49427 29 100.0 32 ............................. TTCTCCAGGGCCGAGACCTGCCTCTCGCTCGC 49366 29 100.0 32 ............................. GCCTGCTACGGCATGGCCGCTCAGGACCCTGT 49305 29 100.0 32 ............................. ATATCCTTGGCTATGGCACGCACGGTGTATGG 49244 29 100.0 32 ............................. TGGGTTTTCTGCACGAAGAAGCCCATGATCAC 49183 29 100.0 32 ............................. ACCAACGATTCGCATGAGTGCTTCCGCCCCTA 49122 29 100.0 32 ............................. GTGCCGACGTCGTGCAGAGAGCGCGTATCGTC 49061 29 100.0 32 ............................. GGGTAGTCGACGGCGGGCACGTCGCCGTAGTA 49000 29 100.0 32 ............................. AGCGCGACCGCGCCCTCCACGAGCACGGGGAT 48939 29 96.6 32 ............................T TTATCTTTGAGCGAATCAAGGTCTTCGCCCTC 48878 29 96.6 32 ............................T ACTTTGCGCTTTTTCACGGCAAAAACGTCCTG 48817 29 100.0 32 ............................. GAGAATCGCATCAACCGCGCCCGCTCGATCGC 48756 29 100.0 32 ............................. TACTGCATGTACCAGAACGCCAACTACGGAAC 48695 29 100.0 32 ............................. GATCTCTCAGACCTTCCAGAAGAGTTTTTTCG 48634 29 100.0 32 ............................. GGTCGCCGGCGTGTCCAAAAAGTACGGCGCCC 48573 29 100.0 32 ............................. GTGTCAATCGCGTGAAAGTCGTGCACGGCATG 48512 29 100.0 32 ............................. GCCTGATGGAACGATGGCTATCAGAGAAAGGG 48451 29 100.0 32 ............................. GGGGTCACATATGCGGCTATGACCGACGATAG 48390 29 100.0 32 ............................. ATCAACGTCCTCGTAGCTAATCCATCCGTCGA 48329 29 100.0 32 ............................. GTACGCGGTGGTCTCGCCCTCGTAGCGCTGGA 48268 29 100.0 32 ............................. GTCTTGGTGTTGTCTCGCCGCATTCCCATGCG 48207 29 96.6 0 .........................C... | ========== ====== ====== ====== ============================= ================================ ================== 34 29 99.2 32 GTGCTCCCCGCATGCGCGGGGATGATCCC # Left flank : TAACAAGGACGAGATAATCGAGCTTGCCGCCATTCGAGTGCGCGGAGGAAGAGAAACCGATGCTTTTCAATGCCTGGTTCGTTGCGGGGGAGAGCTGTCCGACGCAATCGCCAAATTGACCGGGTTGAGCCATAGCAGACTGATGGCCGAGGGCCTGATACTAGAAAATGCGCTCACGAATTTTTTAGAATTCGTGAGCGACGATCTAATTGTTGCCCACAATGCCGAATTCGATATCGGGTTCATTCAGTCTGCTTGTGAAGAGCTTGATTGGGATGATTTTGACAATGATTATCTTGATACGCTTGCATTGGCTAGGAAGAAGTTGCCGCAAATATCGGATCATCGGCTGAGTTCTTTAGCTGAACGCCTGCACCTTGAAAATAGACAACCTCACAGGGCACTTTCCGATTGTAGATTGACGCATTGCCTTCTTGTTAAACTGAATGAAAACTGATTTAGTATTAACGATGGGCTATATTGAACTGGGATGATTTAGT # Right flank : AGGTACGGGCATTTCTCGGCGAGGGCCTTGACGTCGACGCCTTCGAGCGTCCCGTCGTCGGCGAGCTTCGCCCCGGTCATGTCGATATGGGCCATCGCGGCCTGCGCGTCTACGCATCCGCCCGTGAGCAGCTCGTGCTCCACGGCCCATCTCTTCGCCTCGTCGGCGTGGCGGGCAATGACGGCCTCGAGGTCGTCGGCGGCCTTGGCAGCGGCGCCTTTCGCGTCCCCGTCGTTCCCTGCGGGGGTCTGCGGCGCGATGGCGCGCAGCGACTCCATGATCGGGGTGAGCTGCTTGCCCATCTGCTCGCTCACGATGCGCGCGATCTGCTGCTCCTGGCTGGGCTGCCCCGCCCCTTTGCTGCTGCCCTTGGGCCGATCCCTGGCCCTCGCCTTCTCCGTGCATGCCTGCTCCTGTCTCGTCGAGTTTGTTTCGGGCTTCACTGCCCGCTGGCGTCGTCGCTCTGCGCTCGCGGCCCGCGCGATGTCCGTGGGCCTCTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCATGCGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-2] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 319151-316291 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALNO01000001.1 Slackia sp. CM382 contig00011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ========================================================== ================== 319150 23 100.0 53 ....................... CCTTGGATAGTGAACACACCGGGATTGAGAATAACCAGGCATTGATCAGGCTT 319074 23 100.0 55 ....................... TATCGCCGCTGGCGACCTTGGTCGCGAACGTGTAAACGAGCAATTGATCAGGCTT 318996 23 100.0 51 ....................... AAGAGCGAATGCCTTGATGTCAATGCCGTCGACATGAAATTGATCAGGCTT 318922 23 100.0 50 ....................... CAATCGGCAGGCAATGGATGGAATAGGAAAGCCAGGAATTGATCAGGCTT 318849 23 100.0 52 ....................... CGTCGACATGAATATCGAACATGGACATGAGTATTCCTTATTGATCAGGCTT 318774 23 100.0 51 ....................... TTCGTCTCGGTTGTCCTGCGGTCGCCTTCCCCGACATTATTGATCAGGCTT 318700 23 100.0 53 ....................... TCTCCGAAAATGCTTCGATGATCAAACATAAAAGCATACTATTGATCAGGCTT 318624 23 100.0 51 ....................... CCGATAGTAACCTTATAATATGACCAAGCAAGTTCATAATTGATCAGGCTT 318550 23 100.0 52 ....................... CATGAACAGGAACCCTTCGTCGCAACGATTCTTCGTCATATTGATCAGGCTT 318475 23 100.0 53 ....................... AAGGAAAGGAGCCATATACCATGGCGAAGCTCATCAAGAAATTGATCAGGCTT 318399 23 100.0 53 ....................... CCTTGGCGATCTTGTCGGTATCTCCCAGCATGTCTAATCCATTGATCAGGCTT 318323 23 100.0 50 ....................... TCGGGCATCTTGCAGCCTTCGGGATACATCTCGGCGAATTGATCAGGCTT 318250 23 100.0 52 ....................... CAAGATCGTCTCGACGACTGATGGCATTCAGGCCATCGAATTGATCAGGCTT 318175 23 100.0 50 ....................... GTTGACGAAATCTTCCATCTTCTTGGCCATCATCGCCATTGATCAGGCTT 318102 23 100.0 49 ....................... GTTTATATCATCGAGCTGCGAGTCCATCTCTTCAAGATTGATCAGGCTT 318030 23 100.0 58 ....................... ACTTTGTCAACAGGGGGAGAGTTAAACTCACCAAATAAATATTAAATTGATCAGGCTT 317949 23 100.0 53 ....................... GATCGCCTGCTTCGGTGACAAGGACCTGATAGCCATCGAAATTGATCAGGCTT 317873 23 100.0 57 ....................... TACTCGACATCGATTTCGGCGAACGATCCGTCGATCTCGTCGTTATTGATCAGGCTT 317793 23 100.0 51 ....................... TCCGCCGCGTCTATCCAGTGCTAACCGAAGACGAGGACATTGATCAGGCTT 317719 23 100.0 48 ....................... GAGCATGCGTTCGGCAACTCCGGCATCCTGATGCCATTGATCAGGCTT 317648 23 100.0 52 ....................... CATCGCCGCATCATGAATCTCGTTGTAATCGTAATTCATATTGATCAGGCTT 317573 23 100.0 50 ....................... GACCTCAAGCCCTTCACCGTTCAGACGAAGCTTAACTATTGATCAGGCTT 317500 23 100.0 50 ....................... GCATTCGGCCGCCGTAATCGGAAAACCGTTCACGAAAATTGATCAGGCTT 317427 23 100.0 49 ....................... CGTGAAGGTCGGCGATCATAGAATAGCCGTTGCATGATTGATCAGGCTT 317355 23 100.0 52 ....................... CGTGATTTCGCTGGTCCTCGCATTCGCCGCGACGCGCATATTGATCAGGCTT 317280 23 100.0 49 ....................... AATTTACGGCAATCCCCTCAAGCAGCAGATTCACAAATTGATCAGGCTT 317208 23 100.0 54 ....................... GTGATGGAATACTTCCAACGAGGAAGCAGCATCAGCCGCCAATTGATCAGGCTT 317131 23 100.0 51 ....................... ATGGTGACTAGTTCTTTCATGGTTACCTCCAAGCTCGTATTGATCAGGCTT 317057 23 100.0 50 ....................... GATCTCGATCACGGTGTCCTCGTCCAGGTCTTTTACAATTGATCAGGCTT 316984 23 100.0 53 ....................... AGAACGTATGTTCGTGTATTGTTAATACAGATCGATTATTATTGATCAGGCTT 316908 23 100.0 53 ....................... TCTGAATAAACGACAGTGCAATTGTGTTTGTAGGTTCTGCATTGATCAGGCTT 316832 23 100.0 50 ....................... TCGTTTCCAAATCGTACGCGACGCCCGCGGGCGTGAGATTGATCAGGCTT 316759 23 100.0 50 ....................... AATCGAGCACGTATCCGATATAATCCAACCGTTCGTTATTGATCAGGCTT 316686 23 100.0 52 ....................... CATCATGGGCGCAGTAAAGCAGCTCGCGATCCGTGAGAGATTGATCAGGCTT 316611 23 100.0 53 ....................... AACGGGATTACGGAGTAATGGACTCGGTACAGCATCAGATATTGATCAGGCTT 316535 23 100.0 55 ....................... TAGATTTCATGGAGTTTGAGTGTATGTTAATCTTGTGAATTAATTGATCAGGCTT 316457 23 100.0 48 ....................... TCGGGATGACCTCCATACGTACGCATTGCCTTAATATTGATCAGGCTT 316386 23 100.0 50 ....................... GTCTTCTCGCCGTCCCAGGTGAATACGCGGGTCACCCATTGATCAGGCTT 316313 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= ========================================================== ================== 39 23 100.0 52 AATCCCCGAGAGGGGACGGAAAC # Left flank : GGCCCGATTGGTAGCGGAAGAAGGAAAACTTGTTCGGACCAGTTGTTCGCCTGGTAGAGTGAACGGCCCATCTCCTGCAGAGAATAGGTATTACGTGATTGTGCTGTTCGATATTTCAGATGCGAAGAAGTATCGTCTTCTAACTAAGGTCCTTAAGGGATACGGAACGAGAATTCAGAAATCCGTTTTTGAGGCTCAACTCAAGAAATCGCAAATCAAAACGTTAATTGCATCTGTAGAAAAACTGATGTCATCTAGGCGATTCTTTAATCCGGACGATAACATTCGAATTTATGAAATTGCAGGTCATTGCGACCTGACGATATTCGGGGAGTGCCGCATCGATGTGATTGAGGATAATATATTTGTATAGCAGCGTTTTTTGCTGGATTGGGTTATTCTAAAGCGGTGCATGGTAGCAAAGGCATATGGATTTCTTTTTCGAAAAACATCTATTTTATGCCTATTACTCTGCTCTGTCCATGCCATTGATCAGGCTT # Right flank : AATTCATCATGCTGAAATATTTCCACTGATTGGGGGTGCGGACAAAAACTTGGACCGCGAAGGGTCCGGGAAGGGTGGACTGGGCAAGATAAATCGGACACCAAGTCAAGGATGAAAGGTGGAACGAGCAAGATAGATCGGACGCCGAGTTAAGGGCGGAAGACGGAGCGAGCGAAAGCCTGGATAACGAAACCTGAAGACTTTTTCTTGGGTTTCGTTATCCAGGACAAGCATCTTCCGACGAGCGAAAGATGCTTGTCGTCGAGCTGCCAATTGCGATACGCCCAGCCGTTGTTCGCTCTTAGGATTCCGTCTCTCTAGGTGGTGCCGGAACTTTCGTTTTAATCGTGCAGAGCAACGCGAGAAGCAGCGTGATCCCGAGATACACGGGAACGCTCATCGCGGTGCCGGTGTTTTCAAGCAGCATGAGGCAGATGGTCGGGGCGAGCGTTCCTCCGAAAACGCCGGCCATCTGAAAACCGATGCTCGTTGCCGTGTAG # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.38, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCCCGAGAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: R [matched AATCCCCGAAAGGGGACGGAAAC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.60,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [55.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //