Array 1 569-2258 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWNH01000018.1 Leptolyngbya sp. Heron Island J 114, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 569 37 100.0 34 ..................................... TTAACAAGACGGTTCTGGTCTTCCCAGTCAACGT 640 37 100.0 35 ..................................... GCAGTGTGGTGGAGTGTGAGGCGCGATCGCAGATT 712 37 100.0 35 ..................................... TGGAGTCGCGCTTGTTTTTTGCGGATAAGGTCTTC 784 37 100.0 36 ..................................... ATCATTCGCAATCACAATCCTAAGCTCATCTATGTG 857 37 100.0 35 ..................................... TCATGAACCACCATCGTGTACGGGTGCTTGTCCCC 929 37 100.0 34 ..................................... TTCAGTTCCACCAACCCTCGTCTTCAGTTCCACC 1000 37 100.0 37 ..................................... TAATGCCTCACTATAATCTAGTTCGATTTGGTCGTTG 1074 37 100.0 37 ..................................... TAATGCCTCACTATAATCTAGTTCGATTTGGTCGTTG 1148 37 100.0 34 ..................................... AGCTTCAAGAGGCCGACTTCTCTCTCGGCTTCCT 1219 37 100.0 34 ..................................... AGGTTCCCGTAAGTTGCTGGTGAGTTTTTGGCAA 1290 37 100.0 35 ..................................... AAAAATCGAATTGGTACACTCAAGGGCTATTCGAG 1362 37 100.0 35 ..................................... AGTTATATGGTTAGTTGGCGTCACTTTTTGACCGG 1434 37 100.0 35 ..................................... TTTGAAGTTTGGCTAGTAGTCCATTGGCCTGTCTC 1506 37 100.0 35 ..................................... ATTTGTGCTCACTACATTGTTTTCGTCAAAAAGTC 1578 37 100.0 34 ..................................... TTGAGTACATGAGTCCAGGAAATTGGTCGGATAA 1649 37 100.0 34 ..................................... TAGAAGGATCGAGTGACCGAACGCCAACCCCCAA 1720 37 100.0 35 ..................................... TTTATGTCGGCAATGTGGTGCTTGCTCATAAAGGC 1792 37 100.0 36 ..................................... GTCGGTCAACGGACGGTTGGCATTTTCCGACTTCAG 1865 37 97.3 34 ...T................................. AACCCAGTGGTGCCTCAGTGGCTGCCTGACCCAG 1936 37 100.0 34 ..................................... AGTTGGCTTGCGGGGGAATCAGCAGGGCGAATAT 2007 37 100.0 34 ..................................... ATAAGTCTTTATATGGGATCGATTATCCGCTAGC 2078 37 100.0 35 ..................................... TTAGAGCGAGCAGAAGCCGCCCGCAAGCGATTAGC 2150 37 100.0 35 ..................................... ACTAACATTTTCACCCCTGATCAAATAAATCAGTT 2222 37 91.9 0 ...............................C.GC.. | ========== ====== ====== ====== ===================================== ===================================== ================== 24 37 99.6 35 GTTCCAACATCCTCCAAACCCTCTCAGGGATTGAAAC # Left flank : TGAAAAATGGGATGAGGCCTACCCAGCCATTAGCCAGATCTGGATTCGCCACTGGGAGAATGTGATTCCCATCTTCGATTACCCCATGGAAATTCGTCGGGTGATTTACACCACCAATGCTATTGAATCTCTCAATCGTTCTCTGCGTAAGGTGATTAAGACCAAAGCCGTTTTTCCAGATGAAGACGCTGTTTGCAGGTTGATGTATCTGGCGATGAACAATATCGCGAAAAAATGGAATCGACCGATTAAAAATTGGCGTGCCGCACTGTCTCATTTTGCTATCCTGTTCCCAGAACGCTTCTCTCTCTAAACAAACAGCGTTTACACAAAATTCAGATCACTCTCCGCGCAATGGCTGAAATGCTTGTATGGCTTAGGGTTACGCTTTTTTCTTTGGTATCTAGATGCTGCGGATTTGGTCAGCGATGCTATTATTTGGGCAGTTCGCGCATTCGAACCTTGAAAACTAAATATTTCAAGGCTTTTCAAGGCCCGCC # Right flank : CTGAGATTGAGGGCTGGAGCTTACCACAAGCGGTTCAAGTAGCTGGTGATTCAATCAACACGATTGTCAGCAACTACGCACATGCAATCAAGCCTCCATCGATGCCTGAATGGACGTAATCTGTACGTAATCTGCTAGAATTAGAGCCTAAAACCATTGAAATTGCGTTGGTTTTTTAGGAACGAGGCAATATGGCGATTATTGCGCTGAAGGCTTGGTATCTCCAGGATTATGAACCAATTCGGGACTTGGAAAAGCGCCCCCACGATCTACGGTTGGCAAAGAATAGCCTGCTGAAGTCGGCATTGCGGGCTGACTTTTTGGATGATATTGCCGATGTGCGTGAATCAGAATGGTTCCAGCGTTACCTAGAAGGGGATGCGGTGGAGTTTTATGTCGAAGGAAGCGGTACATATGCGATCGCAAATATCGACCTAATCAGCCATGAAATCTACTTTGCTAAGGCCGATTCCCTGGCTAACCTCGATCCCACCATCTTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAACATCCTCCAAACCCTCTCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.90,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 103029-102055 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWNH01000021.1 Leptolyngbya sp. Heron Island J 117, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================= ================== 103028 35 100.0 34 ................................... CCTACTTGTTTTTGGAACGAGTAAGCCATGACCG 102959 35 100.0 38 ................................... CGAAACTAGTCCGGCGATGGTCAGCAATGCAAAAAGTG 102886 35 100.0 38 ................................... CTGATTCGGCGAGGTTAGAATTAGAATTTTCCATAATC 102813 35 100.0 36 ................................... AACATCTGATTAGTCTTACCGCCTACAGCAATAGCG 102742 35 100.0 41 ................................... TCACACACTGCATTGCCGTTGACATTAAATTGCCGTTCAGT 102666 35 100.0 37 ................................... GCGGTGGTCCGGCATCCAAACGTATCGACATCTACTG 102594 35 100.0 36 ................................... AGTCATTGCCACCGCCGATTTCATCGGGACACCCAA 102523 35 100.0 39 ................................... ACTTGGAAACAATTTTGGTAGAATTTCTCTGTAAAGAGT 102449 35 100.0 36 ................................... TCTTGGTCGTAGCGGCGTTTCTGGCTACTACCAACG 102378 35 100.0 36 ................................... TATAACTTATACGTAGAAATCCTCTGGGCTAAAATT 102307 35 100.0 36 ................................... GCGGCGACGCCTACCTGCTGGCGTGCTACCACTTCA 102236 35 97.1 38 ....................C.............. TACTGCATACCTTTGGCTGTGCTTATAATTCCTGCCTT 102163 35 91.4 39 .......TC...................T...... AAATTAGCCTTGTCCTTGTGCCCATTGGATGTAAGCTTG 102089 35 71.4 0 .C.....CC...C........G......AACT.C. | ========== ====== ====== ====== =================================== ========================================= ================== 14 35 97.1 37 GTTCAGAATCCATTACCCCGAAAGGGGACGGAAAC # Left flank : ATTGGGAATAGCTTCTATTTATCTGGGCTTTTCCAGACCCCCTCAGAAATCGGGTTCTAGAGGGCTTGTGTAGTCAGGGTTCCAGAAGATGGG # Right flank : CACACAAAAACAGGGGGCATACGCATGACGTACACCCCTGCCGAATTCCTATTGTTCATGTCTTAGGCTTGGTGAATATCTAAGCCGCCACCAGCCTTAATAACCAAATACCCCGCCTCCGACCTTGGTCGGACATTTCAGCCCTAAAGCCTCCCAAATCCTCCACTAAGGTCTGACCAAGCATGAAGGACGGTGCCACGGCAGAAAGTCTTTAGGAAATATATAGGAAATTCCAAGCGATCGCCCAAATCTGCATGCTAGGTTGGCCAATGTCTACTTGATCTCCTTGTCAGGGGGATTAGGCTGCAGGATACCGAGGAACAGATGTCCGAACTGAAGCTATTGACCGACGAACCCCTTGGGGAGGGCAACGACCCCGACTTAGATGGTCTTGGATTTTCAACCTACTGCAAAGTTCTCGGAGATGCTGCAATTGGAACGCCCGGACCTTTCACGATCGGCGTGTTTGGAGAATGGGGTACCGGGAAAACAAGTTTGAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCAGAATCCATTACCCCGAAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,12] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.60,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 220098-221325 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWNH01000115.1 Leptolyngbya sp. Heron Island J 95, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ========================================== ================== 220098 35 100.0 39 ................................... AATGGTAACTCAACAGTTTGATTAGTTCCTCTTTCATAA 220172 35 100.0 38 ................................... GCAAGTTATTGAACACATCAACCCATAGTAAAACAGCA 220245 35 100.0 39 ................................... ACAGTAATAACAGCAATACCCACTAGACCTTTTGTCAAC 220319 35 97.1 41 ..........A........................ AAAGAATGCATCACTCAAGTATAGGTCTAGGTCTAGGTCCT 220395 35 100.0 40 ................................... CTGCAAGCGTATTGGTCCGGTCCTCTAAGGCTGCATTGAC 220470 35 100.0 40 ................................... CATCAACAACCATGGTTGCCCCGCGCAGGTAGGAATTATT 220545 35 100.0 42 ................................... GCGATCGCGAAGCCGACAAGAAAAGTGGCAACGAACTTAAGT 220622 35 97.1 40 .........................A......... ATAATCGTCGGCAGGTACATCAAAAAACTGTGCCAAGGTT 220697 35 100.0 40 ................................... TATAGATTCCTGTGATGGGGATCTCAGAAGGAAGTGCCCA 220772 35 100.0 39 ................................... TCGGAACACCATCAACTAGGCCAACTGTGAGTGTCTCGC 220846 35 97.1 35 .........T......................... CAACATATTGCTGTTGTATAGCGGCTTCAAGGCAT 220916 35 88.6 39 ...............T.T...T....A........ GAGAATTAAATTGCCATAGGCAGCATTAGTTGCATTAGT 220990 35 97.1 40 .........T......................... TCAAAACTCAACCCCCAAGGGGTTAGGAAAAGGGCTGCTA 221065 35 97.1 41 ..................................T GCTAGAAGTTCCAGTTTGACCAGGGTCTTGAGAAAGTACTT 221141 35 97.1 40 ...................A............... CCAGAGCTATTACCCACAATGGGAAACTCTCCCGAAACGT 221216 35 85.7 41 .........TA.................T....CT GGTTGGGAAGCCCATGGTCGAAGGGTTTAGAGATAGTCAGT 221292 34 80.0 0 ....T.....T......T.........G.-A...T | ========== ====== ====== ====== =================================== ========================================== ================== 17 35 96.3 40 CTTTCATTTCCAAAACCCCGCAAGGGGACGGAAAC # Left flank : ATTCCTGATGATAAGCGGCGAACTAAGCTGGCTGCGTTTTTGGAGGGCTATGGTCGTAGGGTGCAGTACAGTGTATTTGAATGTTTTTTGACGCTTCGAGAAATGGAGGGATTACATCAGGCGATAGAATGGCGGGTCAATGCAGATGAGGATGATGTTAGGTTGTATTGGATTGCTAAGGATGCGTTACCTAGGACGTTGACTATTGGGAGTTCACCGCCTGAGCCACTGCCCAGTGCGTATATTATCTAAATGTTAAATTTCGGCTAGTGGCTTTTTTGTACGTTATTATGTTGCCTATATGGGCCACGGGCCACTTCAGGTTGGACCTTGAAAACCTTATAGTTTCGTTGTGAAGTGGCGGGACCTTATTTCGTCAGGGTTTCGCTAGGCAATAATTGGGCTTCATGCTTTTTTTGAGTGTGGTTTAAGCTGTAGATTTCTGAAGTGGCGTTTTGCTATATTGGAATGACCGGCTGGCAAAGGCTCTGAAAAAGTGC # Right flank : TGCGTAGAACTGGTTGCATCAAAAATAGGGCATACGCACTGCGTACACCCCTATCAAGCAACTCCAATACTCACTCACCTACGAGACACCACCAATACAACAGCGTTCCGATCGCGTCATTATTACGAAAGATTTGACTATGGGCAATGATTGATAGTTATGCCTGAGTCTTGTGCTTAAGAGAGTTGCCGCCAAGGATAGAGATTCCTACTAAGGCAAAGATGGAGAGCATGGGCTCTGGCACATCAGCTGATTCAGATGGGGCAATCTCAATCAAGTCAATGGTAGCATCGATTTCTTCAGGGCCGGCAATCGCTAGCTCAATGGCACCCACATTGGTGAAGTCGGCATTGCCAACAAAGTCAGAAAAGAGAAATCCTGCGGTTAAGGGAGAGGAGTTAGCAACAGGAGTATCAAAGATTTGGGCAAGGCTTGAGGTGTTGTTATTGGTATCATAGACTGTAAACGCAAGCTCTAAGCCAGCAAGGTCAGCAGAGAGA # Questionable array : NO Score: 2.82 # Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.75, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCATTTCCAAAACCCCGCAAGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0 Confidence: HIGH] # Array family : NA // Array 1 45049-44028 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWNH01000038.1 Leptolyngbya sp. Heron Island J 25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ============================================================== ================== 45048 35 100.0 39 ................................... AAAAGATTTATTTGAGCCTCCAAGGGCAAAAGGTTTTTA 44974 35 100.0 35 ................................... GGTAGTCTTTTTCAACTACCTCATTACGAAGATAT 44904 35 97.1 39 .........................A......... AGTCGTATGAAACGATATCATCATCTCCCGGCATATCCC 44830 35 100.0 40 ................................... ACTAATAGCGCTTGTGGTTGTTTCTTTGTACCGCTTTATA 44755 35 100.0 34 ................................... CTAGAGCCCTCTGAGCCAACGTTAAGCTCAGGTG 44686 35 100.0 38 ................................... CCACATTGCAGCACGTTCCTTAGCTAACCGTTGTTTCT 44613 35 100.0 62 ................................... TTGCAGCGACTTCTGATGCCATTGTGGCCACTTCACTGGGGGTTACACGGCCATCTTCAAGA 44516 35 97.1 37 .................................G. TCTGGGTTGTCCACCCACTTTGGTTGCCAATCAATAT 44444 35 100.0 41 ................................... GCAAGATCCCCTAACTGATCGTATTGCTCGACATCGCAATG 44368 35 100.0 43 ................................... ATCTTACTCCCTTTCATTTCACTAAACGGTTGTATTGGATGGA 44290 35 100.0 42 ................................... TTCTGGTGGCATTAGACTATATACCCCTTACTTCTAAGTTCA 44213 35 97.1 39 .........T......................... CCGCTTTGGCGTAGCTAAAGGATCAGTTTAGAATTGCGT 44139 35 97.1 42 ............................T...... CCCTCAAAACGGCTGATCTTCGATATCTCAATTAGCGAGATA 44062 35 100.0 0 ................................... | ========== ====== ====== ====== =================================== ============================================================== ================== 14 35 99.2 41 CTTTCATACCCAAAACCCCTCACGGGGACGGAAAC # Left flank : CCCACAAAAAGACATGGCAAATCGCAGGGGGTAGGGCATAATAACCCAATCCCATGGATTGCTTGCGAATCCGTGGGTAGCCGTCGGCCAGGTGGTGCGAACACCTGCCGACGGTGCCAAGATATTAGGTTCTAGTCGGTTTGTCTGTAAGGACATGCAATGCCCCTACTGGCATTGGGTAACTGTAGACCGGGTTTTAGGGTTTAGTCAAGCCAAAAAATGCTGACCCTGAGCAATTGTATTAATGAAGGTTAAAATATAGGCTGGCGCGGTAATTTCTGAGGTATTTTTACCTATAGAAGTGGGGTTTCTACGCACTCCCCTTGAACCTTGAAAACCTTATAATTTCGTCGATGTGCGTCGATGCCTTGTTATACCTGGCGTTCAGCTGCTGAACGGAGGGCAAGCAGGGCGATTTTGTAGAATGTTCCGTTGTCAAAATTGACATGCGTCGATTTGTCCGCCAGGATTCCTACCAGGCAAGGGCTCTTCAGGGAAGC # Right flank : GACCGCATATTGGCTCTCAAAAATTACCTCGTAGGTTGGGTTAACACCTCTCCCAAATTTTGTGCTCTTCCGCAAAAGCTTCTATTAACCCAACAACTCCAATATCATTGCCCATAATGAGAGCGCACCTTTTTATCCAAATCACGAGTGGTTTTTTCCCTTGTCAGAATGTTGGGTTTTGGGGTGGTGATCAGGGTTGGATGTGATTCAAGAGATATTTCAACCCAACCTACGGTGTTTCGGTAATTTTTTACTCACAACGCAATGCCTCCAACCATTAACGCACCTCTGCTAATCGTAATTCTGGTGCAGGCTGAAACAAGACGCTAAAACCTTTTCTCAATCAATTTGAACCAATACTATGTCTTGAAAGTCGCTAGTTTCTAAAGTATTACCCTCAGAACGAACTATCAGCTTGTTGCCCTGATTCAAACCCCAAACTAGATCCCGAAGAGCCTTATAACTTTTTAGAGTGTAAGCAACTAAATAACTAGTTCTTT # Questionable array : NO Score: 3.10 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.11, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCATACCCAAAACCCCTCACGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 1 3361-4702 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWNH01000041.1 Leptolyngbya sp. Heron Island J 28, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 3361 37 100.0 34 ..................................... AAGATGGATGTATCGGTACCACCATTGCCATCGG 3432 37 100.0 36 ..................................... GTGTGCCTAACGACAAGGCCATTATTGACGCCATGG 3505 37 100.0 36 ..................................... CAAGATGGTTTAGTTTGAACCGTAATGGTTCATCTG 3578 37 97.3 34 ..........T.......................... TTTAATTTGTTGTAAATACGCGCATAAACAGCGC 3649 37 100.0 35 ..................................... TTGTAGCCAACGAGCAGATCCCTTAACGGAAATGA 3721 37 100.0 34 ..................................... GTATTGAAGTGTGATGTGTCTGTGCGCGGGTACC 3792 37 100.0 35 ..................................... GCCATCAGCCTAGGAATCAGCGGCGAGCAAATCCA 3864 37 97.3 32 ........C............................ ATTCACCGGCTTCAGGGCTTCCAGTCTGGTCC 3933 37 100.0 35 ..................................... ATGAAGATGCAAAGCGACTGAGACGGGGGTATTTT 4005 37 100.0 43 ..................................... CAAACTGGTATTGCTCAACTCCGCTTGCAAGAATATGGTCTAG 4085 37 97.3 35 ........C............................ TTCGAAGACGGAACCAGGCATAATACCGTAATCCA 4157 37 97.3 36 ........C............................ TTCAATGTATTTTTGGAGTGCTTCATTGATTTTTGG 4230 36 94.6 34 .......-............................T ATGATCTCCACCCCGGGACACTAAGTCCCTCAAC 4300 37 100.0 34 ..................................... AAACCCCTCAGCAGGGAGACCCCCAGGGTATAGA 4371 37 100.0 39 ..................................... AGTTTCTACGGCACCGTCGAAGGGTTTCAGGATTTTTTC 4447 37 100.0 36 ..................................... CGCTATGTCCCGGACCACGGGGGAATGAAATACGTC 4520 37 100.0 37 ..................................... CGAGAAAGTGAGAGCGGCGCTAAAGGTCGACACGTAA 4594 37 100.0 35 ..................................... TGCTTCTCTGGGGATAGTAGGATCAGCGGTGGTTT 4666 37 78.4 0 ........C................T.CT.C..T.TA | ========== ====== ====== ====== ===================================== =========================================== ================== 19 37 98.0 36 GTCACAACTACCAATTACCCCTCACGGGGATTGAAAC # Left flank : GGTTGTGGCTCGTTTGCTGGGGACAGGGTTTTGGGGTAGGTGAGGGGGTGGATGGGTAGATGGGTGGATGGGTGAGTGCGATCGCGACTATCTGCTAGAGCTTTTTGGGGTTGGTGCTTTAGCTGTGATATTGGTGCCTTTGTAGCCATTGGCTTTTGTGCGGTCGTGGCTCTGATGATCTAAGGCATCCTGTGCTATTGGTACCCTGTAAGTGGATCAGTAGACTAAGTACAATACCAGCCGTTATGATATGCGCGAGTGTATGGATGTTTCTGAGGCCCTGCCGATCAAAGGCCATCAAAGCCTTAGCCACGGGCTAATTAGGGAGTTTTGCTCTATCTACAGGTCCGCGCAAATGCTAGAACCGTTTGGATTCGCGCTTTTGAAGGTTGAAGTAAGTCTGAAATTTTTGTATGGTTTTTTGCAGGGTGACTATAATGGTTAGGTCCGCGCAAATGTACCTTGAAAATTTAATGCAGCCAGCGTTTCAATTGGCTGCA # Right flank : ATACACATCTAGAAGATAATGGTCTAAAAGGTACTGCTGGCCTTGAATTGGCCCTCACCCTAAATCCCTCTCCCGCAGGGCGAGGGACTTTGACTCTGGCTCCCTTCTTCGCCTTGTGGGAGAAGGAGCTGGGGGATGTGGAGCTTTGCTCTTCTCGCAGAGTGGGCTCGAAAATTGGAGCTGCTCTCCGACTTGTGTATACACAGTAGCCCCTCACAGGGATTGAAACAATGCACTTAAGAGAACCTGGGCCTCTCACCAAGAAGTCACAACTACCCATCACCCCTCTCAGCAACCATGAAGTGCTATAGCGGCATCAAGGGCTGGTTACTTGAAAATACCAAATCATCCAAATCACCAACAGCTTTGAAGCAATCAGCCCAGCAGAGCATCAGCGACTGTTTGGGCCTATACCGAAAGGAAAAAACGAGGAAAGACTACTCGGTCATCAAAAGTAAACATGAGTATGTCTAAGGAGAAAAGATTAAGGAGCCGGTAGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:0, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAACTACCAATTACCCCTCACGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA // Array 1 90099-91077 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWNH01000008.1 Leptolyngbya sp. Heron Island J 105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 90099 37 100.0 34 ..................................... AGCTAACCGCAGATCAATACCAGCAGGATAGAGA 90170 37 100.0 36 ..................................... AGAACTCGATGGGTAAACCCAGGTGAACGAATGCGC 90243 37 100.0 36 ..................................... CAATACAGCAAACCCTTAGACCTGACACGGAAGGAA 90316 37 100.0 36 ..................................... CCACTCACTGAACTCCTTGCCTCCGTTGTTGTAGAC 90389 37 100.0 34 ..................................... TCCTCATTTGGTAGCTAGCCTTGCTAATCCTTCT 90460 37 100.0 36 ..................................... GTCGTTAGCCCGCAAGCCAAGGATAACGCAGGCCAC 90533 37 100.0 34 ..................................... TCCCTAGTAGGGCAGGTGAGTGAGTTTGAGTTAC 90604 37 100.0 37 ..................................... ACGCTAAAACGTTCTAATGCCGATTGAAACTCTGCCT 90678 37 100.0 35 ..................................... ATGATTGCAAGGCGAATCGGATCACCGAGTGCTTT 90750 37 100.0 34 ..................................... TTCTTGGCTGATAGGGTGAAATAGTTCTCAAGAA 90821 37 100.0 36 ..................................... ACCTGGCAGTTTGACACACGTTGTTACGATGTTTTA 90894 37 100.0 35 ..................................... AATCCCACCAACCCTAAGTATCTTTTAATCAGAGG 90966 37 100.0 38 ..................................... AACAAAGAATGTGTTTATTGCGTTTAATTCGGCTGTTC 91041 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ====================================== ================== 14 37 100.0 36 GTCACAATCAACCACTTCCCCTAACGGGGATTGAAAC # Left flank : TAAGCGGCCCCTGAGCGAAGTCGTTGGCATAGCCTTCCCGAAGGGAATAGGGAACGCTGGCTGATACCGTTGGCTAACTCCGTTGGAGACGCTGCGCGAACGACTTCGCTCAGCCAACGGTATCGGTGGGACAGTTATCTTTAGGGGCGTTTTAAGCGTCAGGGGTGGTCATATTTGGGTTGCCTATGGGCTGTTGCTATAGGTTATGCTGAAGGGTAGGTGAAGCGTGATCTTCTTGGTCAAAACTGCCCTGCGCGGATGGGAGGCGGTTTTGGTAACGACTCTGACTGAAGTATATGAAACCCTTGCTGCATAAGCGCTTGGTGCTTTTTGGATGTTTTTTAGGTTCGCGCAAATGCTAAAGCATAGTCAGGTCAAGGGTTTGAAGGATTAAGGGAATCTGAAAAATTGTGGTTTTACGGATATGGCGGTTAGAATATAGATGCTTCGCGCAAATGGACCTTGAAAACTTAATGCAGCCAGCGTTTCAATTGGCTGCC # Right flank : CGAGTACTATGTAGCAGCGTAATAAGTGAGAAATAATGAGAGGTCACAAGGGTACATCTCAACTTTGCGCTAGGCATAATCACAACTTGACTTTGTCGATCATCCTAACTGGGCCACCTTTTGCATAAACACTAAGCGCTAGTAACTACGACAGCTTTTTCAGAACTCACTGACAGTTCGCCAACGCCTCAATATCTGCCCTGACAATCTTCTCCAGATTCCGCGTAATTTTTACCCCATCCCAATCCCACCAAGCAATCTCCAGCAAAGCTGCAATCACCGACGGCTCAAATCGTGGTCGAATCATTTTAGCCGGATTACCACCAACAATCGTATAAGGCTCCACATCTTTGACCACAACAGACTGGGCCGCAATAATCGCCCCATGGCCCACCTGTACCCCAGGCATAATCATCGCTTCGTGGCCAATCCAAACATCGTTGCCAACCACCGTATCGCCTTTATAAGTCACCTCATCCTCTTCAGGCGTTACCTTCTCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAATCAACCACTTCCCCTAACGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 8484-9671 **** Predicted by CRISPRDetect 2.4 *** >NZ_AWNH01000099.1 Leptolyngbya sp. Heron Island J 80, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 8484 36 100.0 37 .................................... ACACGGCAGAGTGTAGCCTACTGCGGCGTTGAGGACC 8557 36 100.0 36 .................................... ACTTCAGGGCTCCCAAGGGGCAGATTGCAATTTGTC 8629 36 100.0 35 .................................... ACATGTTTCTAAAGAAACACCGCGTTGGGGGGGAC 8700 36 100.0 35 .................................... ATAAACCCTAGTCCCCAACAGGCAAGAGCAGGCAC 8771 36 100.0 35 .................................... ATTTGCTCAATAACCTTAGATGCGGCGGTGGTTCC 8842 36 100.0 37 .................................... ACAATGCAAGGGCCACACTGAACTGTAGACCTTGGGC 8915 36 100.0 35 .................................... GCCGGTATCTACCACAGCATCGATCAGGGCGTTGC 8986 36 100.0 35 .................................... GTAGAAGATTGTGTAGCGGGCTAGGTGGGGAGACC 9057 36 100.0 35 .................................... ACAGAAAAGCAGGTAGGGGCTCAGGAAGCTGCAAC 9128 36 100.0 36 .................................... GATTGCTTCTTTAGCCTCGTCAGTGTTCCCTCTTAC 9200 36 100.0 36 .................................... ATCTAGCAAAAGTTGGTTTCCTCCTGAGACTCTTTC 9272 36 97.2 38 ........G........................... GCGTCATTGGGGCCGATACGTTTTACCTGCGCAACGCG 9346 36 100.0 35 .................................... ATGCCCTACGGCGGCATCAGCGGGTGAGTGATGGG 9417 36 100.0 38 .................................... GCTTGCCACCAATCTAAGGTCTCTTGAGACACTTCACG 9491 36 100.0 35 .................................... TCTTTGCACCTGCAATCCGAACATATTGCCCCGTG 9562 36 100.0 35 .................................... GAGCATATTGGTTGGCTCAAACTGACTAAAGTTAG 9633 36 88.9 0 ..........................CT.G...C.. | AC,C [9662,9667] ========== ====== ====== ====== ==================================== ====================================== ================== 17 36 99.2 36 TCACAATTAACCACTTCCCCTAACGGGGATTGAAAC # Left flank : CGTTTCCAGGTTGGTCTTTAAGGTCTGAAATTCCGACCTATGTGGAAAAAAGCCGGGTAGATGGACGTAACAAAACGATGCGGTCATTTCGCCAGTGGGTAAGGGAACGTTTATTGGCCCCTGAGCAATGATTGTTTGATACCTTGCCACAGTCAAATTGCCCTGAAATATCTAAGACCGTTTTGAGCACTGGGAAGCGTAGAATTTAGGTAAGTCACTCATCCACCCATGCGATCGCGCCGGGAGCAGCTGCGCGACCAGGAGGCAGTTTTCATGGCACATCTGATTTAAGTAGGCAAAACCCTGACAGCATAAGCGATTGGCAATTTCTGGATATTTAGCAGGTCCGCGCAAAAGCTAGAGCATAGTCAGGTCAAGGGGTTGAAGGATTAAGGAAATCTGAAAAGTTGTGGTTTTACGAATAGGGCGGTTAAAATGTAGATGCTTCGCGCAAATGTACCTTGAAAACTTAATGCAGCCAGCGTTTCAATTGGCTGCAC # Right flank : ACAAGTCGAAGCATAACTCAAGATATCGAGCCCACTCTGCAAGAAGAGCAAAGCTCTACATCCCCCAACCCCTTGCTCCCTAGGGGATACGGTCTAACGCTACTCTCTAAACATACAAGGGGAGCTAGTCTCAAAGTCCTTCTCCCTGGGGGAGAAGGATTTAGGATGAGGGCTAATGCAGAGCATGGAGCTGATTTCCAGTAGAGATCCTAGTGAAGCTCAAACCCACGTTGGGTTCAAAACCCAACGCTAATTGAGGGCTGTCCACTCAAGGGACAAGATTGGCTGAGCAGCTCCAAATATAGAGCTTTTAGGGCTTCTTTAACCGCTTGAGCGGTTTTGAGCCAGTTAGCCTTGCGACTTTGAGTCCAAGGTGGGTTAATGCTTCCTTGCCAGGTGCAAGATCTCAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCACAATTAACCACTTCCCCTAACGGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.40,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //