Array 1 121145-120979 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCUG01000015.1 Streptococcus oralis subsp. tigurinus strain OD_314165_09 s_oralis_OD_314165_09_ID_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 121144 36 100.0 29 .................................... ATTGTCATGAACGCTACCCACTATTGTTG 121079 36 100.0 29 .................................... CTACAAGATATTCAATCAATTCCTACACC 121014 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 3 36 100.0 30 GGTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Left flank : CTAGGATTTTAGCCCGAGCTCAAATCAGCTCTCTGATCTCAGAGGGCTTTTTTGTTTTATCAATTTACTTAGTCCGTGTTCAATTAAGTATATCTTGATAATGAAGCTACTCCATTGGGTAGCTTTTTTGTATGGATTTTATCCCAATCTCAAATCAGCTCTCGGACTTTAGAGGTATTTTTATGTTGTCACCTTACCCCGATATACTCAAGTATAATCTTCGGTTACGGTTCCTAGCACTGTAAGGTAAAATAAACCAGGATGATCTCCCTTCGGGGAGATTTTTTGTTTCACTAAAATTTTTGTACAATCTTCGGCTTGTCGCCTTGTCTATAAACGTTTTATCCAACAAGAATTATGATGCTAAGGGCGCCAAAAATCCGTATGAAAATAGGGAAACGACGCAGTGTTCGATGAACACAAGGAGTTTCATCTTTTTCACTAGGATTATAGCCCGAGCTCAAATCAAGCTCTCAGATTTCAGAGGGCTTTTTTATTGA # Right flank : CTCAAATGGTATCAGCTAATTACACCATAAAGGTGCGCAGTTACTCGGCTTTTCAAGCCGAGTAACTGTCTGCAAGCCCCCTCGGAGAGCCCACACTTTACGAAGTAAAGTATAGTATGTTATACTCTACATGGAAGTAGTCACCGAATTCCAGTTAGAAATTACTTTGTAACTACGTTTTGAGGAGGAGTAAAATGCTTTCTTACGTTCGACATTACCCACTAGCGATAGCTAAATTAATGTGTCTGTGCTCTCCTAAAATCTGCTGATTTATTACTGACTAATACAGGAGGTTTTTATGGGACAGACAATCATATCTGCTATTGGTGTTTATATTTCCACCAGTATCGATTATTTAATTATTTTAATTATTTTATTTGCACAGCTATCACAGAATAAACAGAAATGGCATATTTATGCGGGGCAATATCTAGGCACAGGCTTACTTGTAGGGGCGAGTTTAGTTGCTGCTTATGTCGTTAATTTCGTGCCTGAAGAAT # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTTATCGGTCACAATTTTGGAGACTACAAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.10,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 1607-53 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCUG01000010.1 Streptococcus oralis subsp. tigurinus strain OD_314165_09 s_oralis_OD_314165_09_ID_17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1606 36 100.0 30 .................................... TGATTAGACAGTATTTGAACCCAACTTCTT 1540 36 100.0 30 .................................... TGTGTTTAGAACATGATGTACCTCTATATT 1474 36 100.0 30 .................................... AATAGGTGTAATTTTCCTCAGTAATGACAA 1408 36 100.0 30 .................................... TTCCCTCAACACCTTTTGTAAAGGTCACAC 1342 36 100.0 30 .................................... ATCTCTCGGTCTATACTTTCTAACTGTACT 1276 36 100.0 30 .................................... AGCAGAAGAGAACAAACCAAGTCAAACTCA 1210 36 100.0 30 .................................... AAAAGGATGCATTTGCTTATATCGACAGGA 1144 36 100.0 30 .................................... TTTTAAGATTTCCAAAATCGATGGAGCGAG 1078 36 100.0 30 .................................... AAGTTCGGGTAGTATCAAGCAAATTGTAAA 1012 36 100.0 30 .................................... TCTGAGATTCAATTGAGTTTAAGGGTATCT 946 36 100.0 30 .................................... ACCAAATCTTAAAACTTCTTACTTACTCTA 880 36 100.0 30 .................................... AGTAGCTAAATTAGGAGCTGCCGCTTATGC 814 36 100.0 30 .................................... TGATCAAGAGACGCTTAACAACTGGTCTAA 748 36 100.0 30 .................................... TAATGTTGCGATGCTTATTCACTATGGCCA 682 36 100.0 30 .................................... AGCAGACTTTGAATACTTCCCAAGTATGGA 616 36 100.0 30 .................................... GATAGAAGAGAATTGCTCTCGCAGTGCAGT 550 36 100.0 30 .................................... ATTCAAAACTTTGTCAATAAAAGACCTAGC 484 36 100.0 30 .................................... GATAGAAGAGAATTGCTCTCGCAGTGCAGT 418 36 100.0 30 .................................... ATTCAAAACTTTGTCAATAAAAGACCTAGC 352 36 100.0 30 .................................... TCAATCTGAAAAGAAAATGAGGGAGCTGGT 286 36 100.0 30 .................................... GACATGGTGCGTGACCGTATCACGACCAAA 220 36 100.0 30 .................................... TTAAGTTTGAAAAACCAACTGTTTCCAAAA 154 36 100.0 30 .................................... TCCAGACGATGTAGTTATCGATCCAGTGGC 88 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 100.0 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : ATCAACTCAATGACAAACCAGAAGTAAAATCCATGATTGAAAAGCTGGTAGCTACGATAACAGAATTGCTGGCATTTGAGTGTTTAGAAAACGAATTGGACCTAGAATACGACGAAATCACCATTCTGGAGTTAATCGATGCGCTAGGGGTCAAAGTTGAAACTCTGAGTGATACACCTTTTGAAAAGATGCTAGAAATTGTCCAAGTTTTTAAATATCTTTCCAAAAAGAAACTCCTTGTTTTCATCAATGCGATCGCCTATCTATCAAAGGATGAGTTGGTAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTTTTATTTGTCGAACCTCGAAAAGTCTATGATTTTCCGCAGTATGTGATGGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATAAGAGTAACAATTGGAACCTAACGAGCTGAAGTCTGGCTGGGACGAATGGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : CCGATGGATTTGATAGATGGTTGAAAGAACAGTTTTAGAGCTGTGTTGTTTCG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //