Array 1 1370973-1369947 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP066046.1 Pediococcus acidilactici strain FDAARGOS_1007 chromosome, complete genome		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1370972	    36	 100.0	    30	....................................	TCTTGAAACCAACGTAGTAACCAGTATTGG	
   1370906	    36	 100.0	    30	....................................	TTATCCGGAGCAACGACTCCGCATGGATTT	
   1370840	    36	  97.2	    30	.........A..........................	CGTGGTTTCGATAAAGGCCGATGAAGATTC	
   1370774	    36	 100.0	    30	....................................	GGCTTCTTCCCGGCTTTGCGCAAGGCTTCC	
   1370708	    36	 100.0	    30	....................................	CAGAATAATATTCTGCAAGCTTTGAGTAAC	
   1370642	    36	 100.0	    30	....................................	CTAGATAAAAAACGTTGGAAAGCAATTCTT	
   1370576	    36	 100.0	    30	....................................	ACAAAACGGAGAAAAACACCCAAACCTACC	
   1370510	    36	 100.0	    30	....................................	TGATTGATTAATCAATGTTTTAAGAATCGG	
   1370444	    36	 100.0	    30	....................................	ATAACGGTGACCCATTGTTATTCAAACGTA	
   1370378	    36	 100.0	    30	....................................	TTTCTTCTCAAACGGCCATGTCCATTCGCC	
   1370312	    36	 100.0	    30	....................................	CTCAAATTGTTGAAGCGAATATTAAGTTCG	
   1370246	    36	 100.0	    30	....................................	TCGGGAATGTCGTCAACTTCCGTGGCGTGT	
   1370180	    36	 100.0	    30	....................................	AATCAATTTTGGGATAGCACCGGTGGTAGT	
   1370114	    36	 100.0	    30	....................................	AAGATTGATTATGCAAGAATGACTGAAAAA	
   1370048	    36	 100.0	    30	....................................	TTACCCGTTGGTTATATCACACCTATGGGC	
   1369982	    36	  97.2	     0	..................................G.	|                             	
==========	======	======	======	====================================	==============================	==================
        16	    36	  99.7	    30	GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC	                              	       

# Left flank :   CCAGGACTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGGTTGATGGATGAGCAACGTAACCAAATTCATGATCAGGTAAACCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTGATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG
# Right flank :  GTGGCTGGTTAGTTTGGGTATCTAAGGGAGTTTTCAGAAGGGGAATAAAGTTAAATGGAAGTCATAAAAAAGAGCCAAACAAGAATGAAAGGTTAACAATATTACTGGCGGTAATACAAACCATAATGAGAACTCTAGATTGGCTCGGGTACAGTTTTAAGAAATAGGATTAAGAGACGTAGATCTTTTTTGCCGCTCTCTATATATATTTTATAACGGAGGAATAAAAAAATGAAAAGAGAAAAAGCAGTTAACATAGTTATTGTATTGCTGTTAATTTCAATCGTGTTATCTATTTTAAATCTATTTAAGTAGGTGTGTATCGTGAGTTTAATAAAGAAGCACCTAGATTCTTATAGGATTGCTAAAGATAATAATATTACCTAGCCAATAATGACAAGGGGAATTAATAAGGACTTGGATAACTTATCGTTTAAGCATCTTAAAGCTATCTCCACTTCCCTAGGAAAAGATATAGTAACTTGTCGCAAAAGAATTAA

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [0.00,-1.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,1.05   Confidence: HIGH] 

# Array family : NA
//