Array 1 1370973-1369947 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP066046.1 Pediococcus acidilactici strain FDAARGOS_1007 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1370972 36 100.0 30 .................................... TCTTGAAACCAACGTAGTAACCAGTATTGG 1370906 36 100.0 30 .................................... TTATCCGGAGCAACGACTCCGCATGGATTT 1370840 36 97.2 30 .........A.......................... CGTGGTTTCGATAAAGGCCGATGAAGATTC 1370774 36 100.0 30 .................................... GGCTTCTTCCCGGCTTTGCGCAAGGCTTCC 1370708 36 100.0 30 .................................... CAGAATAATATTCTGCAAGCTTTGAGTAAC 1370642 36 100.0 30 .................................... CTAGATAAAAAACGTTGGAAAGCAATTCTT 1370576 36 100.0 30 .................................... ACAAAACGGAGAAAAACACCCAAACCTACC 1370510 36 100.0 30 .................................... TGATTGATTAATCAATGTTTTAAGAATCGG 1370444 36 100.0 30 .................................... ATAACGGTGACCCATTGTTATTCAAACGTA 1370378 36 100.0 30 .................................... TTTCTTCTCAAACGGCCATGTCCATTCGCC 1370312 36 100.0 30 .................................... CTCAAATTGTTGAAGCGAATATTAAGTTCG 1370246 36 100.0 30 .................................... TCGGGAATGTCGTCAACTTCCGTGGCGTGT 1370180 36 100.0 30 .................................... AATCAATTTTGGGATAGCACCGGTGGTAGT 1370114 36 100.0 30 .................................... AAGATTGATTATGCAAGAATGACTGAAAAA 1370048 36 100.0 30 .................................... TTACCCGTTGGTTATATCACACCTATGGGC 1369982 36 97.2 0 ..................................G. | ========== ====== ====== ====== ==================================== ============================== ================== 16 36 99.7 30 GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Left flank : CCAGGACTTAGTTATTCAAAAGTATTTAACTAAGATTGAACGGGTTTTTGCCGAAGGGTTGATGGATGAGCAACGTAACCAAATTCATGATCAGGTAAACCAACTATTTAATACGGTTGCTGAACAATTATTTATGCTAGATTTACCGATTAGCGTCAATTATGATTTTGATTTGAAAAAGTTATTGAAGTATTGTGGAGTGCACTTTGATCCGCTAAGCGTGGGTAACCCATATGGTATAATTGAAGCGATTTTGAAGATTCACGAGGAGTGCGCGATTAATTCGTGTGTCGTGTTAACTGATGTTGCACATTATTTGACAGCGACCCAAATTGAAGAACTTACCCAGCTAGTAAGTCAAACGAATCAAGCACTCTTACTAATTGAATTCACAGAAATAGGCAATCAGGAGGCCTATGGAAATAGCGAATTCTACTACATTGACAATGACTTTGTTGATTGGCATCAGTAATTGATGAAATTTTAGTTAGAAAATAACG # Right flank : GTGGCTGGTTAGTTTGGGTATCTAAGGGAGTTTTCAGAAGGGGAATAAAGTTAAATGGAAGTCATAAAAAAGAGCCAAACAAGAATGAAAGGTTAACAATATTACTGGCGGTAATACAAACCATAATGAGAACTCTAGATTGGCTCGGGTACAGTTTTAAGAAATAGGATTAAGAGACGTAGATCTTTTTTGCCGCTCTCTATATATATTTTATAACGGAGGAATAAAAAAATGAAAAGAGAAAAAGCAGTTAACATAGTTATTGTATTGCTGTTAATTTCAATCGTGTTATCTATTTTAAATCTATTTAAGTAGGTGTGTATCGTGAGTTTAATAAAGAAGCACCTAGATTCTTATAGGATTGCTAAAGATAATAATATTACCTAGCCAATAATGACAAGGGGAATTAATAAGGACTTGGATAACTTATCGTTTAAGCATCTTAAAGCTATCTCCACTTCCCTAGGAAAAGATATAGTAACTTGTCGCAAAAGAATTAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGGATGTTAAATCAATAAGGTTAAGATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //