Array 1 3908723-3911922 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFYD01000001.1 Elizabethkingia anophelis strain NCTC10588, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 3908723 47 100.0 29 ............................................... ATATAAAAGGTTAGAGAATTTAAGTTTCT 3908799 47 100.0 30 ............................................... TATCAACAGAACAAAAACATCAGAGACTCA 3908876 47 100.0 30 ............................................... TGCGTTCTTTACTGACATGTATTGTTGGGA 3908953 47 100.0 30 ............................................... AGAAAACGCCCCTTATTGTGGTTTGCATTA 3909030 47 100.0 30 ............................................... CGTAATCGTCAATCCCCTTACCAACGTCCA 3909107 47 100.0 30 ............................................... AAATGTTTGTTAATTAAATATAAAATCTGT 3909184 47 100.0 30 ............................................... TGTCCATTACCTGCTGCATTCTTGTTGTAA 3909261 47 100.0 30 ............................................... ATTTAGTTAAATCAATACTAATAACTGGAT 3909338 47 100.0 30 ............................................... ACTTCTTACTTCGATACTCTTCATTGCGTA 3909415 47 100.0 30 ............................................... CAAGTATATCCCGTACAATTTCCAAAGCTT 3909492 47 100.0 30 ............................................... CGCCTCACTTCTATTCAATAGGTCGAATTC 3909569 47 100.0 30 ............................................... AGATCATAGCCAAGGCCGCCCGGGCGTGGA 3909646 47 100.0 30 ............................................... AAGCCCTCCTAGATAGCCATCTGTACCATC 3909723 47 100.0 30 ............................................... GGTATTTGCTGTCCGCTTTTCGTGGTAAAT 3909800 47 100.0 30 ............................................... TTATTTAAAACGCTCTTAAGCCTATTAACA 3909877 47 100.0 30 ............................................... ACTCTCTATAACGATCCTTTCAGGGTCTTT 3909954 47 100.0 30 ............................................... TAAATTCGCCAATATTCGAGTTTCGATATA 3910031 47 100.0 30 ............................................... TTACATGATCGAACAAATAAAAGTGATCGG 3910108 47 100.0 30 ............................................... CCATTTCTCACATTTTCCAACGTGGTTAAA 3910185 47 100.0 30 ............................................... AGGGTGCTTATTGGGGACTTAGAAAACAAA 3910262 47 100.0 30 ............................................... ATGTTTTTCCCAACGCTGTGGAACTCGAAA 3910339 47 100.0 30 ............................................... ACGTTGGCACTCAATTCGGTAAATGGCTTC 3910416 47 100.0 30 ............................................... AGTCAATGCGACTTCTTTTTCAATCGCTGA 3910493 47 100.0 30 ............................................... TTTACCGTGTTCGGAAATCGAACACGGCTT 3910570 47 100.0 30 ............................................... TGCGAACCTCGATTGATTTTAACGCAAATT 3910647 47 100.0 30 ............................................... CTTTTGTGGCATTGGGCTTTTGTCTGTTAA 3910724 47 100.0 30 ............................................... TTTTCCAAAGGAAACCCAAAAAGCGTTTAT 3910801 47 100.0 30 ............................................... ACATTACGTCGTTTTTATCAATGTTGGACG 3910878 47 100.0 30 ............................................... TCTTTTTTCCCTTTGATCTTAATACGCAAT 3910955 47 100.0 30 ............................................... ACGATATCACCTTCTTCAGCTGTTGGATTC 3911032 47 100.0 30 ............................................... TTTATTAAAATCATTCTGAATAGCTATTCT 3911109 47 100.0 30 ............................................... GATTTGGTGAACAAAGTTCAGGAAAAATTT 3911186 47 100.0 30 ............................................... TTAAATAATTCTTTACAATTTTTGCATTTC 3911263 47 100.0 30 ............................................... GTAAATAGCGTTATTCCCATGTTATGAAAC 3911340 47 100.0 30 ............................................... TGAAAAAATAACGTGTGAAATTAAGAGTAG 3911417 47 100.0 30 ............................................... GCATATGAAGTGAGGTACTTTTATAGATTT 3911494 47 100.0 30 ............................................... AGCTTTTAGGGTAGTTTCTGGTACTTCAGA 3911571 47 100.0 30 ............................................... GGCCCATTCTTTTAAGGCACTAATAGGCGG 3911648 47 100.0 30 ............................................... CGTTAATACATGATCTCCAATTGCTGGAGC 3911725 47 100.0 30 ............................................... GTCTCTCTGTTCATCTGTGCAACCAATTTA 3911802 47 100.0 30 ............................................... CAATTCCAAGCATACCCAACATACCGAAAC 3911879 44 91.5 0 .....................................--..-....T | ========== ====== ====== ====== =============================================== ============================== ================== 42 47 99.8 30 GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Left flank : GATGGAAAGACCAGACCTTTGCTGGTGGCTGTAAAAACAACAGCATCATCACTATATAAATGTTATACAGGAGAAAAACGTTTGATTGCTTATCCTGAACTGATATGAAAGCCGAAAGGTTTAATGCTTACCGGATTATGTGGGTTCTAGTACTTTATGATTTACCAACCGAAACAAAGGAAAATATGCGGGATGCCAATCTATTTCGTAAACGTCTGTTAGATGATGGCTTTTCGCTTTTTCAGTTTTCAATGTATATCCGCCACTGTCCCAGTAGAGAAAACGCAGAGGTCCACATCAAAAGGGTAAAAGTCATGTTGCCTAAAGCTGGAAAAGTTGCTATTATGTGTATTACCGACAAACAGTTTGGTGATATTGAAATTTTCTTCGCCAGAAATAAAGAAGAACCACCGCCGACCTTTCAACAGTTGGAATTATTCTGATTTTTAAATTCTAAAAAATAATAAAATCCGTTGATTTTCAACGGATTAAATTTTGAG # Right flank : TAAATTAAGGTGTTTTTATTGTAAATTAGATTTACATAATGAGCCTTTTGTGGTTAACCCTGTTTAGTCGATAAAGATCATTATAAAAAAACAAAAACCTTTCAGTACTCCTGAAAGGTTTTTTTGTATGGTTTAGGTTTTTAATTTTAATCGTGCATTTCGCTTTCGACATAGCCTTCATCTTCGATCTGGAAGGTCGTATGGCTAATTTTGAAATTACTGGTCGCCTGATCGGTGAGTATCCGAAGCATTTGGTTATGCGGAATGCTTTGATCGGAGACAACATGGGCGCTCATCGCATTGATACCAGAGGTTAGCGACCATACATGGAGGTCGTGCAGGCTTTTAACACCCGGAACTTTTTCCATGGTACTGCGCAGTTCATCAATATCTACATCTTTAGGAGTACCTTCCAATAATACATGAATAGCTTCCATCAGAAGTCGCCATGTTCTTGGGAAGATCAGTAAACCAATACCTGCAGAGATCAGTGGATCGGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTTATATCACAAAGATATCTAAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAATTTTCACTATCTTTGTGATA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,4.87 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //