Array 1 56736-56304 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDJW010000002.1 Enterococcus sp. CWB-B31 contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 56735 36 100.0 30 .................................... AGAAATCAATACTTCTTAGATTATCAGATC 56669 36 100.0 30 .................................... TAAGAATCGAGCTGGCCTGGTCGTCGTTTA 56603 36 100.0 30 .................................... TTTTTAAATAAGTGTTAGCTACCCCGATAT 56537 36 100.0 30 .................................... AAGTTACATAGAATGTATGTGCTTAGATGA 56471 36 100.0 30 .................................... GACGACATTTTCAAAATCATGAATAATCTT 56405 36 100.0 30 .................................... ACACAACATACACTGTGAAAGTTGTCAATG 56339 36 94.4 0 ...............................C...T | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 99.2 30 GTTTTAGAGCTATGCTGTTTTGAATGTCTCCAAAAC # Left flank : ACTAGTAAGCCGTTTGTGAGGTGGTTATTTTAAGTATAGGGGATCGGTATAAGGATGCTAAGAAGCTACACCCATTAGTGGAAGCTTATAAGGGGATTCCAAGTTATGAAATTATTGAATAAATCTATAAAACTGTGGATATGGTAAATGAATATGAGAAAAGAAGGGAGGGGTTGGGGAGGTCATCCGGCTAGGAGCCAGAACCTGACAAAACCTGGCGTTTAAATGCTACATGAGGCTACTTTTCAAAACTAAAAAGCCTTACTTGAAAGCCAATATAATTACTTGTTTTTTATTTGAACGTCCCTTTTTAATCGGAGCATTTTTTATGATGAAGATTATTTTCTTTACCATGATGATAAGGTATAATAGTAGGTGAGGGTATGTGGTCCTTGAGAATTGAATAATTAAGTAAATAATTTTGAGACATTCAAAGCAAGAATCTTGCTAGGATGAGTAGTGCGATTACGAAATTAAGTGGAAAAAATTTTTTCTACGAG # Right flank : TAATACTATAGACGAATTTGCAAATGGATAATTTTTCTTCTTACTTATTTAGCATAAAAGTCCCTCCTACAACTAAATAAGAGGGACGTGGGATTTTGAAACCAAAAATGAAATTTAATTTAAAACATCAACTAAACGTATTTTGGTAATATTTTTAAAGAATGACAAATCTTCAATAATCTCAGCATATGTTTTGTTATTAGGGATGGATATTCCATACACATTTTGGTATATTTTATAGTCTTCATATATTTCGACGTTAAAAGTAACTTGATTTATTTCAATATTATTTTCATCAAAATATTGTATAAGGAATTCTTTAGTTTGCTGTCGATGCACATATTGTACTTCTAAGTTTTTTCTAGTGGGCACTTTTATAAATTTTGAAATGAATATGAGTGAAAAAAGAATTAATATAAAACTTAATGCAGCGATTTTATAATACCCCATACCTATCGCAATACCTAGTGCTGATACTGCCCACATAGTTGCAGCAGTTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGTCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 140743-141505 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDJW010000001.1 Enterococcus sp. CWB-B31 contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 140743 36 100.0 30 .................................... TAGTGTGAGTTCTAAGAAAAGAACTATACT 140809 36 100.0 30 .................................... TTTATTCTCAGGAATTGGTGGCTTTCGATT 140875 36 100.0 30 .................................... TCATAAGGAACTTTCAGAAAAATGTAGCAT 140941 36 100.0 30 .................................... GTTCATAAAATGATTGATTACTTTACTACC 141007 36 100.0 30 .................................... TTTCCAGGCATTACAACAAGCGTGCCCTCA 141073 36 100.0 30 .................................... TCATAAGGAACTTTCAGAAAAATGTAGCAT 141139 36 100.0 30 .................................... GTTCATAAAATGATTGATTACTTTACTACC 141205 36 100.0 30 .................................... CCATTTAAGATATTCATGCACTTGCACTAT 141271 36 100.0 30 .................................... GGTGGCTACCATGGAGAGTACTGCCATAGA 141337 36 100.0 30 .................................... AGGTATTAACGTTATTACTGGTGTTATTGG 141403 36 94.4 30 .............................AT..... AGTACTTCATGCCTTGCTTGTAGTCTTCAT 141469 36 94.4 0 ..............T....................T | C [141498] ========== ====== ====== ====== ==================================== ============================== ================== 12 36 99.1 30 GTTTTAGAGCTATGCTGTTTTGAATGTCTCCAAAAC # Left flank : AAGCTGAGTTCGACTATAAGCGATTTGATTGGATATGAACTATTAGAGCATGAACTAGATTTAGAGGAAGATGAAATAACTATTTTGGAACTATTTAAAGCTTTGGGGATCAAGATTGAAACTAAAAGCGATACATTTTTCGAGAAGTTGCTGGAAATTATGCAGATAACCAAATTTCTTTCTAAAAAGAAATTACTGGTTTTAGTCAATGTCTGTTCATTTTTAACGAAGGAAGAATTAGAAGAAATGACGCAGTATATCTCTTTATTGCATATTCAAGTGTTGTTTATTGAACCAAGAAAAGTTGATACGAAAAGTCAATATATATTAGATGAAGATTATTTTCTTTACCATGATGATAAGGTATAATAGTAAGTGAAGATATGTGATCCTTGAGAATTGAATAATTAAGTAAATAATTTTGAGGCATTCAAAGCAAGAATCTTGCTAGGATGAGTAGTGCGATTACGAAATTAAGTGGAAAAAATTTTTTCTACGAG # Right flank : TCCTGTTCAGCATGATAACCTTTCGTTGGGTATAGAAAAAGTACTCAAAGCTCGCAAGGTTCAAATGTTAAAAAATCAATCTGTTCTAACCTTCGTCAGATAATTCTGTGACAGGAGTATTAGTTGCAATTGTGTTTTTAACTTCGCTATCCATAGCTCTTACCCCCTCTTCTAACTCTTCATGATGATCAAGTATGTTTAATGGATTCCCCCTTCTGATTATTTTCTCAGGGATATCTTTTTTGAAATGATCTTTATAATCTTGTTTTAACATTTCAATTTTTTGGAACAGCATATCTGCTTTAGCTATTTTGCTATCTCTCTTTCAAAGTTATACTAATGATTAAATTAAAAAATTCCAGTTCACTATCTATTTTCCTGTAATACATAGTTCCTCCATCTCCAACTCTAGCTGATTGCCGTTCGGCACAATATATTTTTAAGCCCATGTTTAGAACCCCACTAGCTTTGGCATATTATTTTCCAATGTGCAGGCTTAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGTCTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 45275-44718 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDJW010000011.1 Enterococcus sp. CWB-B31 contig11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 45274 30 100.0 36 .............................. TTGTTTCAGTATGGATTTAAATAGCTCTTATCCTCA 45208 30 100.0 36 .............................. TACAATATAATGAAGAAAAAGGTAGAAAGAACCCTT 45142 30 100.0 36 .............................. ACAATTACTTCACAAGCAAGAGGAAATGCATTTCAG 45076 30 100.0 35 .............................. GAGTTTCCAGAAATTGATTTGAGTGAGCCAATTAA 45011 30 100.0 36 .............................. ACGTAACGCCATTACGCCAGTTGTTTTCAAGAAATC 44945 30 100.0 36 .............................. TAGTGTTATATCTATTTGCGATCGACTTACGAAAGA 44879 30 100.0 36 .............................. ATTTTAGCAGCAGCAACACTGTAACATTCTTTTACA 44813 30 100.0 36 .............................. CTTGGTAAATATGAAGTTGAAGAAATCAAGGTCAGT 44747 30 76.7 0 GG........G....A...A....T.G... | ========== ====== ====== ====== ============================== ==================================== ================== 9 30 97.4 36 CTTTTAATCTAAACAGAGTGTAATGTAAAT # Left flank : GACTTCTCAAAAATGGAAGATTTCCTACGCAGTCAGGTACGTTTCTCAGCATTGCGTAATATAAAACAGGATGAAATTGAAGTGGAACAAATGCTTCATCAGACAGTTACGGACATGGAAGAACGCTCAGAAAGCTATACTCAGTTATTGAAGAAATAAGAATTGGAGATATTGATTAAAAAGAAATACTTACAATCCTATTTGAAGTTCTTCAACAGTAAGGAAAATGATAAGTAGTAAATGGTCTGTCGATCTCCGATAGCGCATAAATACAGGGAGATCGACAGACTTTTCTTTGAAATAGAATGTTTTGAATAGAAAACGCTGATTTTCCGGAGTTTAAGGGTCAGAAATTTAATTATGGAAAAAGAAATATCTCTTCAGCAAATTGACTTTTGTAATATATGTAGTTTAAAATGTAAGGGTAGAATGATTCAGAAAAAGAGATCGACAGAATAGCCGCTAGAAACCCTTATTTAGCAAGAGGTGAAATCGGGTGG # Right flank : TTTGCTAAAAAAATAGAAAATGTCTCTTACGGATTTGTCTTAATCTAAACAGAGTGTTTTTCTCATAAGCTAATATATTGATTCAGCTCAAATAAAAAAAGCCAAGACGCAGTTTGTCTTAGCTTTATATAATCTATTTCTTTTTTGTAAATCCCTGTGCTTCAAAATCTTCAACAGTTTTTTTGAAGCTGACATTATCTGAGTCGTCACTTACTGCAAGTCCAAGTGTGGAAGCATCTGCTTTTTCAAGGTCAACGGACATTGTAAGTAGTAATGTTGTATCTGTAAATTTCATGTCCATAGAAGTACCTTCTCCATCTTCATAAGCCTCGTACATAGAACGAACTCTTTCTTCAAGAGCTTCCTTGGTTTCATCATCAATGAAATATCCATCCTCATACCCAAAATAAGAGTACGGATAGTCCATTTTTTGGTCAACTTTGATCAACTTATCTCCTTCATGTGTGAAGATCGCTTCCATAGTTGCACCCTCAATCTCG # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATCTAAACAGAGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 2 59947-58993 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDJW010000011.1 Enterococcus sp. CWB-B31 contig11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 59946 30 100.0 35 .............................. TTGTTTCAGTATGGATTTAAATAGCTCTTATCCTC 59881 30 100.0 36 .............................. TACAATAGGATGTATATTACGTAACCCCCAACCGAC 59815 30 100.0 36 .............................. TTGGATTAGGTGTATTGTTGTTATGCCAAAATCTAA 59749 30 100.0 35 .............................. GTATTCTAATCTAACACGTAACGTAGAACGGTCAC 59684 30 100.0 36 .............................. ATTTTCAGTTGCACTTACTAAGCCAGAACCACCAGG 59618 30 100.0 36 .............................. AAAAATATTTACTCTGGATAGATGGCCAGAGACATG 59552 30 100.0 36 .............................. GTGAAAAAGTAAAAAGTTCCGTTATCAACGGTGAAA 59486 30 100.0 36 .............................. CTCTTATGTTCAACTGAAATCGAGTATGAAGATGAA 59420 30 100.0 36 .............................. TTTTGTAGGTTCTTCGGACTTAGTAACCGAAGTTGG 59354 30 100.0 36 .............................. GGCAATAGAGGAGTAAGTGCTACAGGGCAGCAACAT 59288 30 100.0 37 .............................. ATTAATTTGAGTAATAATTTGCTTTAAACATACTCAA 59221 30 100.0 36 .............................. ATTAAAGAGACAGTTGGTGATCCAATCACAATTAAA 59155 30 100.0 36 .............................. ACTAGAGAGTAGTGTCTACCAATGTAGCACTGCTCT 59089 30 100.0 36 .............................. AAGTGTGAATTACGAAACAGCACAAGATTACGGGGA 59023 30 86.7 0 .................A..A...T....A | T [58995] ========== ====== ====== ====== ============================== ===================================== ================== 15 30 99.1 36 GTTTTAATTTAAACAGAGTGTAATGTAAAT # Left flank : AGATGAAGAAGATTATGAAGGGATTACCAGAGATTTTGTGAAGGAAGTTGAAAAGCTGACAGATCAGGATATCGATGGTGATGGAAAAATTGCCGGAGGAGAAAAGGTTAAAAAATAACCTTTGATTTTAGGAAGCATTATTATTATATGAAATATAAGCTGAAATTTAATGAAAATCGCCAGTCGACTGCCATGGTGCGGTCGTACTGCGCACTTTCAGAAGAAGTGCTGATTTTCTTGAATTTCAGCTTTTTTGTTCTGTTAGAAAGGGAGATAATATTGGAATGCTCGAGCGGCAGGATAAAAAATTGGTTTACGATTGAAGCTGTCGACCTTTAATACTGTAGAAAAGGTGGGCGATCGACAGTTAATAGAAACATTGCTAGCATTGACTTTTGAGTAATAACTACAGTAAAATGGAGAGGTCAAAGCGAGAAAGTCAGTTGATCGACAGAATAGGCGCTGAAAATCCTTATGTGGTAAGGGGAAAATAGGCACCC # Right flank : AGTCATGGTTATTTTTGAAACCATGTTTTTTTTGAAATTCCCAATGTATCTTTGACCATACAATATCACTAGGTCACTGCGTATTCTAATGCTCTATTTTACTTTCCTGTTTTAAACGAAACATGATTGCTTTTCCTGCTGATTTTCATTAGAATGGAACAAGTGAGAAGAGGAAGGAACGAATTATGAAAACACAACCAGTACAGAAGAACGAAACAATTGAAGTAGAAATTATTGATTTAACTCATGAAGGCTTAGGTGTCGGTAAAGTGGATGGTTATCCGCTTTTCATAGAAAACAGCCTTCCTGGAGAAAAGGTAAAAATTCTGGTTTTAAAGGCTGGAACTAAATTTGGCTATGGAAAAGTTCTGGAACGTCTGACGGACAGTCCTGATAGAGTCACGCTGACTGACGAAAGTCTTTTGAGAACAGGCATTGCTCCGCTTCAGCATATGACTTATGAAGCTCAGCTTCTATTTAAACAAAAACAAGTCGAAAAA # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAATTTAAACAGAGTGTAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA // Array 1 93708-95986 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJDJW010000014.1 Enterococcus sp. CWB-B31 contig14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 93708 36 100.0 30 .................................... GCAACAGCGCCAGTTATCACAAGGTTAGCA 93774 36 100.0 30 .................................... TAACCAGTGCAGTGATACCAAATATTAACA 93840 36 100.0 30 .................................... ACATAGTCTGTAAATAATAAAACATAGATT 93906 36 100.0 30 .................................... ATTTATATAATGAATATGATGAGCCTATAA 93972 36 100.0 30 .................................... CATAGTAAGGTATTTCAGTTTGAGCACTGA 94038 36 100.0 30 .................................... CAAACAAATGAGAAATAAAAATAAAAAATA 94104 36 100.0 30 .................................... CTAACGCAGATTTGATGAAGCCGACTAACT 94170 36 100.0 30 .................................... TTTACCGACAAAATCACGCATCCACCTTGA 94236 36 100.0 30 .................................... GCGGTAGCGATATGAGTACATTGCTGCTTT 94302 36 100.0 30 .................................... ACTTTGTACAGTCGAGAGGAATACGAAATG 94368 36 100.0 30 .................................... AAAATAGTTTTAAAGGGCTGTAATGTTTAT 94434 36 100.0 30 .................................... TAGTTACTTTTGCTTTGCAGTTCTGGCACT 94500 36 100.0 30 .................................... TCTGGATACATCAAAGTATCCTCCACTTTC 94566 36 100.0 30 .................................... ATAAAGAACGTGAAATATCAGGCTTAGTTT 94632 36 100.0 30 .................................... AGGTGCTGATATCTCCTGATAAGAGTATGC 94698 36 100.0 30 .................................... TTACTGTCCAATGTGTGGGAAGAAATTCAA 94764 36 100.0 30 .................................... TAGACAACTTGCAGACTTGAGAGACGAAGC 94830 36 100.0 30 .................................... TTTTCTTTTTGAACTTCCGAACAGGTCCAT 94896 36 100.0 30 .................................... ACAAATATGTTATCGAAGGCTTCGAAGAAG 94962 36 100.0 30 .................................... AGTATGCCAGAAAATAATATTCCGACACTT 95028 36 100.0 30 .................................... TGCTTGACAGTTGGAAACAAATCTGTTACA 95094 36 100.0 30 .................................... TGTTTGACAAAAGAAAAGGCAAAATTTTGT 95160 36 100.0 30 .................................... TGCTTGACAGTTGGAAACAAATCTGTTACA 95226 36 100.0 30 .................................... TTGTAGCCTCTTTAACTGTACTTTCGTAGT 95292 36 100.0 29 .................................... TAGATGGCAGTATCAGTTACAAATTCGAG 95357 36 100.0 30 .................................... AAATTTTTGGAGAAATTGAACAACCGAATG 95423 36 97.2 30 .G.................................. AGTATGCTCGTTTTTGATCGTAGCTGTATT 95489 36 100.0 30 .................................... CATATGCCTTGTTGTTTTGTGTACCCTACT 95555 36 100.0 30 .................................... GAAGCGTTGTCGAAATCATTCGGTGGTTGT 95621 36 100.0 30 .................................... AATACTATAGATTTCCCGTTTGGGATCATT 95687 36 100.0 30 .................................... TGACAAAAGATAAGCCTACGTTAAAAAAGA 95753 36 100.0 30 .................................... AAAAAATGTCAAAAGTAGAAAATGTTTCGA 95819 36 100.0 30 .................................... TAACTATGTCAGATAAAGAATTATTGTTTA 95885 36 100.0 30 .................................... AAAAATCAAAGAAATAAGTCGATAGGGATA 95951 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 35 36 99.9 30 GTTTTTGTACTCTTAAAGATTTAGTAACGGTAAAAC # Left flank : ACTCAGAAAGAATGTTGGATAGTCATTAATAAACCTGAATACTTTTTACATGACCAACTTCTACAGAAGTTATTACAGAAATTTAAAGATATTGGAAAAGAAACGAACTTGCTAAAAGTCTTTTGGATTAGTGACTATTATTTGGATGAAGATTTTAGTGTTGACGATATTGAAAAGGTTATTTTTTTAGGTGAAAGGGCTGAACAATTTCCACCTTATGAAACGCTAAAGCAATCTATTCGCTTAAGATATCCAGATGAATTTAAATTAACAGACAATGAATTATTAAACTCATTACACAGAATAATTCCCCGAATAAGTGAAAATCAAGATCTATTACACCTTCCGTTGAAAGATATGGTATTATTAAAAGTAATTAATCAGTTAATGGGTTATTTGGATACCCAATATTCTATAAATTATGATAATTTATCTGAATTAGAATATAAATTTTTAGCTGATTAATTTACAAAAATCTAGATTGAAGACGTTCATTTGAG # Right flank : CAGAAGGTAAAAAGATAGATAATGTTATTCGTTTTTGGAATGGCAACCCTTTTCTTGACAGTTTTTATAAGGTGTCCGATTTCAATTCGCGTTATTGTCCGATTGTCCTTGACAATGAGCCTCCTCGGATATGAGGAATACCGGCAGAAGCTAATAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTTAAAGATTTAGTAACGGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //