Array 1 398-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJZ01000197.1 Streptomyces sp. SID2999 SID2999.c221, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 397 28 96.4 33 .............A.............. GGTCCCGATCGGCACCGCGCTGGCCGCCGTGCT 336 28 96.4 33 .............A.............. CATAGATGTACTTCTTCTTCACCCGGCCCGCGC 275 28 100.0 33 ............................ CCACTTCGGTGCCCGGGGGCAGTCGGAGCCATC 214 28 100.0 33 ............................ CTGCGGGCCGGAGATCTGGAGGGTCCCGTCATC 153 28 100.0 33 ............................ GAACTGGACCCCCCAGGTGTACGACCAGCTCGG 92 28 100.0 33 ............................ GCCAGTGCAGAGCTCACGGCCCATCGACGGCAT 31 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 7 28 99.0 33 GTCGTCCCCGCGCCTGCGGGGGTGTTCC # Left flank : CTCCCCCTCCGCTACGCGGTCCGCGACATCCCCCTCCCGGACGGCCGTCACATCTTGGCGGGCGACCCGATCCTCGCCTCCTACGCGGCCGCCAACCGCCACCCGTCCTGGCACGGCGCCTCCGCCGACACCTTCGACGCCACCCGCCCGCTGAAGGACCACCTGGCCTTCGGCCACGGCATCCACTTCTGCCTGGGCGCTCCGCTGGCCCGGCTGGAGGTGGGGACGGTGCTGCGGGGGCTGTTCGAACGGTTCCCCGATCTGAAACTCGCGGTGCCTGTCGGGGAGTTGCGGCCGGTGCCGTCGCTGATCAGCAATGGGCACAGGGAGGTGCCGGTGCGGCTGGGGCGGGGCGGGGGGTGAGCCCCCTCCACGCCCTCCCCAACGTCGCCCTTCGATGCGTACGCTGGCTGCCAGCACAAGGAGGCGCTGCTATGACCACCCAACTGCAACTAAACGAAAAAGCCCCCACCGCCGCCTAACACCCCAGGTCAACAAGC # Right flank : CTCC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTGTTCC # Alternate repeat : GTCGTCCCCGCGCATGCGGGGGTGTTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [1.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 10227-10077 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJZ01000424.1 Streptomyces sp. SID2999 SID2999.c479, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 10226 28 100.0 33 ............................ CGGGCGCGATCTCGGCCACTTCGTCCTCCCCTT 10165 28 100.0 33 ............................ CCGGAAACCTTGCGCCCCTGGCTCTCGGCGGTC 10104 28 92.9 0 .....................T.C.... | ========== ====== ====== ====== ============================ ================================= ================== 3 28 97.6 34 GTCGTCCCCGCGCCTGCGGGGGTGTTCC # Left flank : C # Right flank : TCTCGGAATCTACGGAACCTGCGGCATCCCCTTCCTGGCAGCCTCGTGGAGCGCGGGAGCTGCGTTACTCGGGCAACGGCCTCGCTGAGGGCAGCGCACCTCTGATCGGACGGCGCTTACTGGCTCTCCTCCGCCCCCAGCCTTCACCGTCGTTCCCGCGCCGAAAGAATCAACCCCTCATAGTCCACCGACCGCCACCGGTCCCGGCCCGCCGTGCGGATCGCCCAGCCCTGTTCGTTCGAGGCTGGTTCGACGAGTACGGCCTGGCCGTCGCCGATGCGGGTGGCGAGGAGGTCCCAGAGGCGGTCGCGGATTCGGCGGCTGGGGTTGCCGACGAAGACGCCCGCGCTGACCTCGACCATCCAGCGGGTGAGGTGCCCCCGGAGCCCCTCAGGTGCTGCGATCAGGACGATGACCGTCATCCGGCCTGCTCCGGTTCCGGGCCGATGACGGCGATGTGCCGCTCGCCCATGGTGGCGGAGGAGACGTCGGAGGCCCAG # Questionable array : NO Score: 5.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCCTGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [3,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGCCTGCGGGGGTTGCTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [38.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.5 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8-552 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJZ01000491.1 Streptomyces sp. SID2999 SID2999.c559, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =========================================================================================================================== ================== 8 28 100.0 33 ............................ TGCCTCCTGGTCCGGGTTCCAGCTCGCCCCGCG 69 28 92.9 33 .........A...........A...... CTCCCGGCCGCGCCGTGCACGGTCACCGGCACC 130 27 92.9 33 .................A...-...... CCACATCTCGCCGGGGCAGGCGTACATGGCCCG 190 28 100.0 33 ............................ GTGGGCCACGTCGTTGCCCCGGCCGATCTCTCC 251 28 96.4 32 ........................C... CCGGTCGAAGCCGAAGGCGGCTTCGTGTGTGC 311 28 85.7 33 .......T....GC..........C... GTCCTTGGGCCACGCAAAGACCACCAGCCAACC 372 28 85.7 123 ....G...T.....T..........C.. AACAGGCGTGGCAGGCTCCTGCGAGCAAGTCCCCTGGTCCCCGCGATCAGGGGTGTTCCTAGGCCAGTGTTTCAGGAGTGGGTCAACGAGAGGGCAGCCCCGCGAATGTGGGATCGTTTCCGC 523 28 82.1 0 C..........C.A.......C.C.... | T,A [526,542] ========== ====== ====== ====== ============================ =========================================================================================================================== ================== 8 28 92.0 46 GTCGTCCCCGCGAGCGCGGGGGTGTTCC # Left flank : CGGCGCGG # Right flank : CCGATCACGCGGCCCCCACCTGCGCCCACGAATCCGCCTCCGCAAGGACACCCCCTACTGACCCCCACCACCGCCCACCCCGCACTCCGCCCAAACCACCTTCCCCGGCCCC # Questionable array : NO Score: 4.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:0, 6:0.25, 7:-1.24, 8:1, 9:0.47, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGAGCGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [7-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-26.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 154-4 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJZ01000063.1 Streptomyces sp. SID2999 SID2999.c69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 153 28 100.0 33 ............................ CCCCGTACCGCTGCTGCCACCCCTGATGGGGCC 92 28 100.0 33 ............................ CTTCTCCGGTGTCGGCACCAGCGGCTACTCCTT 31 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 3 28 100.0 34 GTCGTCCCCGCGAGCGCGGGGGTGTTCC # Left flank : CCAACTCCAGCGCGGCCGTGCGCCTTCGGCTCGGTGAGGAAGACGTATCCGCACCGGATCAGGAGGCCGAACGCAGCGAAGTGGGTCGGCAGCCGGCAGTAGTTGGGCATCGCCACCCCGCCACCGCGAGGGGCACGCCGGTCCGGTGACCGCTCGTTCGGGGCCCGCCGGGGGCATCTCCAGCTCAGCGGTCCGCACCTGCGCGGACCAGTGAGCGTTTTCGGCGTGGCCACTGATCGGGTGCCGCCGGTGAGGTTGAGGTGGGAGCGGAACGCACAACGTCCCCGTGCCGTGGAGGGAGGCGTTCGAGTCTGAACCCGACTTCCGCCATCCCGGTCCACCGTCTGAATGCTGCTCCTACGATGAAACAGAGCGTAGAGGGGGGTACAGACAATCCGGCGCCGAAAAACTGGCGTGTGGCAGACAGCCGAACGGGAGAACCGCCGATCCAACTAAACGAAAACAGGCCCCTCCCCGGATAAAGACCCAGCTCAGCAAGT # Right flank : CGCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGAGCGCGGGGGTGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGAGGGCGGGGGTGTTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 2351-2140 **** Predicted by CRISPRDetect 2.4 *** >NZ_WWJZ01000063.1 Streptomyces sp. SID2999 SID2999.c69, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2350 28 100.0 33 ............................ GAGATCGCGCGGATGCGCGAGGACCAGGTCATG 2289 28 96.4 33 .....................A...... GGCGTGGCGCGGTGCCATGGGCACCGACTCCTT 2228 28 100.0 33 ............................ ACGGGCCGCGGAGATCGAGGCGAAGGAGGCTCG 2167 28 92.9 0 .....................A....T. | ========== ====== ====== ====== ============================ ================================= ================== 4 28 97.3 33 GTCGTCCCCGCGAGCGCGGGGGTGTTCC # Left flank : | # Right flank : CTTCTGGGCCCGCTGTACCCGATCGTGGTCGACGTCATCCGCGCCGCGCGTCCGCCCGCCGACAGTCGGCACGTGATCAGCTTGGCGCCCAGTGGGTGCCGTGGTCCCGCCCACGCAAGGGCTGATCGAGCGCCGGAAAGCCGCTCGGGGGCGGCATACCGCCACCGCCCCGTATGCGCCGGCGAGAAGTGGCAGACGGAGCGGCAGGCGCCCCGCCGCATCTGCCCAGTTGCGCAGTAGTCGCCTGTGGCGGGCCGCAGGCGGACTTGGTCGGCGTCGCCGCGTCCGGCAGGGACAGCGGCCGGGATTTGGTGGCTTCCGTCTGCCTCTGGGACGTACCGCTGCGATGATCAGTGTCATGGACTTGCGCATCGCACCAGCCGGGGTGGCCGACTTCCACGAGGTCCTGTCGGATCACCCCCGTTATTGGGGCGAACGGGATCTCAGGTCGCTGCATCTCCTGGCGTTGGTGCAGGAGTTCGGCTCCACCTGTCTGGTTG # Questionable array : NO Score: 5.72 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGAGCGCGGGGGTGTTCC # Alternate repeat : GTCGTCCCCGCGAGCGCGGGGATGTT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGTCCCCGCGAGCGCGGGGCTGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-12.10,-12.10] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [26.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.91 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //