Array 1 290740-290308 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001022.1 Aminomonas paucivorans DSM 12260 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 290739 36 100.0 30 .................................... TTATACGACACCGGGGGTAGGTGGCCCCCT 290673 36 100.0 30 .................................... GGGAACATAGCATCAAACGCCCGGACTAGG 290607 36 100.0 30 .................................... GATTCTTTGTCTTTTGGCGGGGTTTTTCTA 290541 36 100.0 30 .................................... GCGGTATCGGTGGACACCACAACGGTCGTG 290475 36 100.0 30 .................................... GTAGGCGGCATTCGAGGGGCTGCGCCCCCG 290409 36 100.0 30 .................................... CGCCCGGCGCATGACATAAGCAAGGTTATA 290343 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 100.0 30 AGCATAGCATTTCGGAGTGCGGCAGGGAGCTATGAC # Left flank : CGATCCTTCGGGGAACGGAGCTGTGCGCGGAGGGCTTCGCCGCTGCCTGCCGGGAGAAGAACCCGGACCTGCTGGCCCTTCCTGCGCTGATTTCCCCGGATGGCTGAAGGGCGAGGAGGCCCGCGACTCCTGAGGCTGCTGGTGTTCTTCGACCTGCCCGTCACCACCCAGGAGGCCAAACGGAACTATGTGAGGTTCCGCCGTTTTCTCCTGGAGGACGGATACGACATGCTTCAGTTCTCGGTCTACTGCCGCATCGTCAACGGCGAGGATGCGGTGTCCAAGCATCTGGAGCGCCTGGCCCACAACCTGCCCCCCCAAGGGTCCGTCCGGTTCCTCCAGGTCACGGACCGACAGTACGCCCGCATGAAGCTGCTGGTGGGGGGACGCACCCGCCAGGAAAAGAAGGTCCCCGCCTGCCAGATGCTCCTGTTCTGACCTTATTTTTGAAGCGCCGAGAGGCCCTCAACCCGCTGGGGAAGAGGGCCTCTCGGCGGAAC # Right flank : TTCAAGACGCCTTGGCCCGGTGACCCGAGGGTCAACATTCAGAAAGGCGAAGGCGGCAAAGCCAAAGGATACCAGGTCAAGCAGGTCATCAAGGCCCACCGATCGCCTACTGGAAGGCGAAGAAAGGAGCCCGTCATGAACGAAAACACGTCCCACTACATCTACCGGGTGGAGTGGTCCCAGGGAGACAACGAGTACGTCGGGCTCTGTTCCGAGTTCCCAAGCCTTTCTTGGCTGGAGAAGGACCCGCAGAAGGCTTTCAGCGGGATCATGGCCCTCGTCGCCGAGACGGTGGAGGACATGGAGCGCAACGGCGAGCCGATCCCCGAACCGCTATCGGATCGGGTCTATTCGGGCAAGATCCTTCTTCGGACCACTCCGGAGCTGCACCGCAAGCTGGCGGTCCAGGCGACGGAAGCCAAGGTCAGTCTCAACCGCTACCTGAATAGCCACCTGACTTCCGTTCTTCCCTGAGGCTCTGACAAACAGGAAGCCGCTTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGCATAGCATTTCGGAGTGCGGCAGGGAGCTATGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.30,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [41.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 302946-298107 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001022.1 Aminomonas paucivorans DSM 12260 chromosome, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 302945 30 100.0 35 .............................. CGGCAACCACAACCGCAAGGGGTTGAGCCCTTCCA 302880 30 100.0 36 .............................. TCTTGTCCATGGAGGGTTTCCCTGTCAGGACCTCTC 302814 30 100.0 36 .............................. TACGAGGCAAGAAGCCGCATGTCTGCGACTGGTGTG 302748 30 100.0 35 .............................. TACAAGAAGGACAAGGGGGGGCTTCTGCCCCCCCT 302683 30 100.0 35 .............................. CTGCCAAAGACGCGTTGGCGAAGGTCAGGGGGATG 302618 30 100.0 35 .............................. CTGCCAAAGACGCGTTGGCGAAGGTCAGGGGGATG 302553 30 100.0 36 .............................. TAGCCGCGGCTCACGGGTGACCCCTCCTTTCCGCCG 302487 30 100.0 35 .............................. AGGTTCCCGAAGGCAGCAGGCGACGTCTCGGAGAG 302422 30 100.0 36 .............................. CTCATCCTCTGCAAGTCCCATCCGCTCTTTCGCCCT 302356 30 100.0 36 .............................. GACTTTCGGGATAACTTCGTGGTTTCCGGGGACTTC 302290 30 100.0 37 .............................. ACGGGGCGGGTGTCGCCGGAGACCCACAGCCAGGTCC 302223 30 100.0 37 .............................. ACCGACTCGAAGAAGTCCAGGCACAGGGCGTCATTCG 302156 30 100.0 35 .............................. GGGCAAAGAACTTGCAGATGATCCGCTTCTCTCGG 302091 30 100.0 38 .............................. CCTTTCGGGGCACCCAAGCCCCTCTACGCCCCTCTGTG 302023 30 100.0 36 .............................. CGATGAGGGTCACCTGACTCAGGTGACCGAGGAGAT 301957 30 100.0 36 .............................. TGTCGCGTCCCGGGCAAGGGACAACCCGCCCGGGCC 301891 30 100.0 35 .............................. GCGTCCTTCATTCCCCGGAAGATGACCCGGGCCCC 301826 30 100.0 35 .............................. CTCATGCACATGTGGTTTCCTCTCCTTTCAGCTCC 301761 30 100.0 37 .............................. ACCTGTGTGCCGCAGAGGACGTGGTTCTCCCCCCCTA 301694 30 100.0 35 .............................. CTTCTGATTCCCGCCAGAGCCACCTTCGGTTCCAT 301629 30 100.0 35 .............................. TGGTAGGGGTGCCGCCCAGCCGCCAGCCAATACAG 301564 30 100.0 35 .............................. ATGGCGGCGGCCACCCCTAGCCGGAAAGCCCGTTC 301499 30 100.0 36 .............................. TCCAGCAGAGACCGCATCCCCCTTCCCCCCTCGGCC 301433 30 100.0 38 .............................. ACGTGTCCCTCCTCGGTCCGGGGAAGACCGCTAGGCCA 301365 30 100.0 35 .............................. GTCGATGACAGCAGCGATAGGACCGGTCGTGTCTG 301300 30 100.0 35 .............................. AGAATCTGCTCCGTGGGCAACGTCCAGTAAGACCA 301235 30 100.0 35 .............................. TAGTCTTGATTTGATAGGCAATTTCCTCCCTACCC 301170 30 100.0 37 .............................. GATGTACCACCACTGAAGAGCTTCTGGAGTATCTAGA 301103 30 100.0 36 .............................. CTGCCTGTGCGAGGGTCCACACCACGGGGCCAGTTA 301037 30 100.0 36 .............................. TTATGCTGGCGAGTGAGAGGGAATGCTTGCCATGCC 300971 30 100.0 35 .............................. TTCTCGAACTCAGCCCACTGCGTGCCCTCGGAGAC 300906 30 100.0 36 .............................. TCCCGGGCAATCTCGATCACGGATGCCAGGCACTCC 300840 30 100.0 34 .............................. CTTTGCCTGCTTCTGACGCTGTGCGTCGTCTCAA 300776 30 100.0 37 .............................. GCTCGTCTCGGATGGCGGTGATGGCGGCCTTTCCCGC 300709 30 100.0 36 .............................. TCGAGGACCTGGACAGCACCGCCACCGGGGCGGACG 300643 30 100.0 36 .............................. TACATCTGGGCGACCTCGTGCATGAGGTCGCAGAAC 300577 30 100.0 37 .............................. ATTTTCCAGTACCCTATCCCCGCCAAGGATACGATCC 300510 30 100.0 35 .............................. CAGTAGTCGTCTACAACCAGTATGTCTCCGCCACG 300445 30 100.0 35 .............................. TATACTCATCGTAAGGACACAGAAAGGAGGTGGCC 300380 30 100.0 36 .............................. CAGTCATCACGAATAGGTCCTAGCGCAACCGCAACA 300314 30 100.0 37 .............................. GAGGTACGGGTCTGAGACGAAGGCTACGACCCCGTTC 300247 30 100.0 36 .............................. CGGCATGCAGTGACCATCCGGGGGGCGGAAGCGTTC 300181 30 100.0 37 .............................. CCTACGCCCGAAGGTATGCGCTGGCGGCCATCGTGGG 300114 30 100.0 34 .............................. CCTACCCCGTAGGCGCACACCAGCTCTGCCGCTC 300050 30 100.0 35 .............................. ACGTGGCTGACCGTCTCGACGACCTCGGACTACGA 299985 30 100.0 35 .............................. ACGATTCCACGAGCTTGCTCGTGGAGGCGCGGGTG 299920 30 100.0 37 .............................. GCTACACCACCAAGGGCACCGAGACGGAGTCGTACTC 299853 30 100.0 38 .............................. CGGTCTCCTACGTGCGGAGGCGAACCCGGTTCGTCCGC 299785 30 100.0 37 .............................. TGAAGACGGGCGAGTGGAGTGCCACGACGCCCTGTGC 299718 30 100.0 35 .............................. TGAGCAAGGGGCCGTCCCCGAAAGACTGGTTCCTC 299653 30 100.0 37 .............................. GTGTGGCTCGGTTCGGCTTGGCGAGGGTGATGGGGCA 299586 30 100.0 36 .............................. TGAGAGGATCGCCAGCGAGATCGAAGAAGAGATCGA 299520 30 100.0 36 .............................. CTCAAGGAGAACACACCGGAGGGGCCGAACGTGGTT 299454 30 100.0 35 .............................. CTTCGTCGTGGGGATGGACGATTCCATGAAAGGGA 299389 30 100.0 35 .............................. CTTTCCAGTCCCGTGAAGGCGCTCAAGGGTGGAAA 299324 30 100.0 35 .............................. GCGGGACTGTTTGGTCTACACGTGCAACCCCTTGG 299259 30 100.0 36 .............................. GCTTCGTCGCCTGGTCCCTGGCCTCCGCAGCTCTGC 299193 30 100.0 37 .............................. ACAGAAGCGATCCCCCGCGATAGACTGTGCCCACCAA 299126 30 100.0 35 .............................. TCAACGTAAAGTACGCCGGGTTCTTCCATAATATC 299061 30 100.0 36 .............................. TCAAGGTGCCGCCTTGGCTCGAAGCCTCGGGACTGT 298995 30 100.0 35 .............................. GCATCAACAGGGTCACACACCAATTAAGCCCCTGT 298930 30 100.0 36 .............................. TGGGACACCGCGAGCCCGTGCGCGAACCCCGCTTTC 298864 30 100.0 37 .............................. TACGGTCCGTCGAGGTCACACGATCAAGCGCGGGGTG 298797 30 100.0 36 .............................. AGTGGTCCGGCCACCAGGCTGGGGGCTGTGCCCTCC 298731 30 100.0 36 .............................. CTGGTGGAGTCTCGTGTAGATGAGGTCCTGGTCCGA 298665 30 100.0 35 .............................. ATTGGCGCTGGCATCATGGACATGGATACCAGGCC 298600 30 100.0 35 .............................. TCGCCATGTGGAGGGAGGCACTGCGGGCAGACTAC 298535 30 100.0 36 .............................. GCTCTGGTGCTGGCCTTGGAGGACGTTCGATCCCTC 298469 30 100.0 38 .............................. CCAACCCTCAATAAACTCCCCACGCACACCCACCCACG 298401 30 100.0 34 .............................. CTCGGACCCAGTGCGCCGAGTAATCCACGTCCAG 298337 30 100.0 38 .............................. ATGGTCTTCCCAACGGTTCGGGCCATCATCACCGCCGC 298269 30 100.0 35 .............................. TCAAGGGATCGCCTGGTGTCCCTTGTCACCCTTTG 298204 30 100.0 38 .............................. GAGGCCCCGCGCCGCAGCGAGCGGAAGCGGCGGCCTTC 298136 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 74 30 100.0 36 GCTTCAAGCCTTCCTATGAGGTATGGAAAC # Left flank : TCCTGGGCGACCAGCCCTACGAAGCCTTCGCTTCGCGATGGTGAACCGTGTTCGTCCTCATGGTCTATGATGTGGGGGAAAAGCGGGTGAACAAGGCGCTGAAGGTGGGAAGGCGCTACCTTTCCTGGGTCCAGAACTCCGTCTTCGAAGGAGAGCTTTCTCCGGCCCTTTACCAGCAGCTCAAGGCGGACATGGGGCACCTGCTCGACAAAACCCACGACAGCGTGATCTTCTACACATGGCGCACCGAACGATACAGCACCCGTGAGATTTTGGGGCAGGAGCGCGGCACGGGAGATCCGTTCCTCTGATCTCCCCATGGGGTGTGTGCCTCGTCGACCTCCGATCATGCAGAAACCCCAGGGGATCGACACCGAAGCCCTAGGGCTCCCACCCCCTTGCAGAACCTGGGATTCCTGCCTTACCATGCACCTTGACAATCGAACCTGCCCCATCTTCAGGGGCACAGGAGATCGTAGACACACCAAGCATCGCCAGCG # Right flank : GCCGTGACGAGTCGATGGACGTGACCGGAGGTATGGTGGACCCCAATGTCAAGACCACGGGAGCGGCAAGGTTTGTTAAGGTCAGACCGCCATGGAACCCGGGGTGGTGAAGTGCACTTCCTGTGGAGTCCGGTAGCGCAGCGATGAATGAAGCCGTTGCTCGTTGTAGAACTTCATATACTCTCTAAGTCCCAACTTGAGCTCTCGAACCTCCTGGTAGTCGTTCAGGTAGAGCCATTCGTACTTCAAGGTCCTCCAGAAACGTTCCACGAAGATGTTGTCCAACGCTCGCCCTCGGCCATCCATGCTGATGCGGATCTCCCGGTCCTTCAGTGGCCCCAGGAAGGCCTTGCTGGTGAACTGGCTGCCCTGGTCGGTATTGAATATCTCCGGTGTCCCCTGGGACAGGGCCTCTTCCAGAGCTTCGATGCAGAAGGTCGCGTCCAGGGTGTTGGACAGTCCCCAGGACAGGACGTACCGGCTGTGCCAGTCGATCACCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAAGCCTTCCTATGAGGTATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.90,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [38.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 607350-610496 **** Predicted by CRISPRDetect 2.4 *** >NZ_CM001022.1 Aminomonas paucivorans DSM 12260 chromosome, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 607350 29 100.0 32 ............................. GTGGTAGCCGACACCGCCACGGTGATGCACCG 607411 29 100.0 33 ............................. TATGGTTCTTATGACAAAGGAATGGTGGCGGTC 607473 29 100.0 33 ............................. CGGGGCGCTGGCCACGGGAACGACACCCTATGA 607535 29 100.0 32 ............................. CCAACGACACCCTTCGGTGGCTCGGGCGGAGC 607596 29 100.0 32 ............................. AAATCGCAAACCCTGTCAAGAGATCCACTTGA 607657 29 100.0 32 ............................. TCTCCCCGATTGATGAAATGATGATATCTAAC 607718 29 100.0 32 ............................. TGTCATATCGACAGGAGTGTGATAATCCCCCA 607779 29 100.0 33 ............................. GCTTGGGCGCTGGGAAAACTGGACGCCCTGGAC 607841 29 100.0 32 ............................. TAATTAGCTATTTGTGAAGTTTTCGCCCAAAA 607902 29 100.0 32 ............................. GCGGCGGGGGACGCTCCCCCGGGCCCGCCGCC 607963 29 100.0 33 ............................. GAGAGGAACAACGATGACTTACGGATACCCCAA 608025 29 100.0 32 ............................. GATCTTTTCCCAAAGGTCTGCACCAAGAACGA 608086 29 100.0 32 ............................. GGAAATGCAAAAGTTACGCATGCAAAGGTGAT 608147 29 100.0 32 ............................. TGGCTGACACCTTTAGCATGGGCGTCGAAGAC 608208 29 100.0 32 ............................. GAAGATATGAAGATGCAGATGGCTAAGAAGAA 608269 29 100.0 32 ............................. TCGGAAGAATGGATGCCTGGGCAGACGCGATG 608330 29 100.0 33 ............................. CCGTTCACGCTCTTCGAGCGGCAGAAGCGTGAC 608392 29 100.0 33 ............................. GAGAGGAACAACGATGACTTACGGATACCCCAA 608454 29 100.0 32 ............................. GATCTTTTCCCAAAGGTCTGCACCAAGAACGA 608515 29 100.0 32 ............................. GGAAATGCAAAAGTTACGCATGCAAAGGTGAT 608576 29 100.0 32 ............................. TGGCTGACACCTTTAGCATGGGCGTCGAAGAC 608637 29 100.0 32 ............................. GAAGATATGAAGATGCAGATGGCTAAGAAGAA 608698 29 100.0 32 ............................. TCGGAAGAATGGATGCCTGGGCAGACGCGATG 608759 29 100.0 33 ............................. CCGTTCACGCTCTTCGAGCGGCAGAAGCGTGAC 608821 29 100.0 32 ............................. CCGTCGGGGCCTGGGCCGAGGAGGAGCTTGAC 608882 29 100.0 32 ............................. GATCGTTTCCACCGGCTACCCCTCCCCCGCAA 608943 29 100.0 32 ............................. AGATGCACGTCAAGGGGTCCCGTGGCGACGGG 609004 29 100.0 32 ............................. AGGGCCGCAAAAATCCTCCTGGCAGACATCCC 609065 29 100.0 32 ............................. GGACTGGGGCTTGGAGTTTCGGACCTGGAGAA 609126 29 100.0 32 ............................. CTGGCGGCGCTCCCGGAGAAGGGCAACGAGGC 609187 29 100.0 32 ............................. CAGGGTTAGCACTTTGTCTGTCTGATTCATCC 609248 29 100.0 32 ............................. AGAAGCGTTTGATAAGACAGTGGAGAGCGCAC 609309 29 100.0 32 ............................. AGAAGCGTTTGATAAGACAGTGGAGAGCGCAC 609370 29 100.0 32 ............................. CGCCAGGACCTTCCCCCCCGCCCACAGCGCGG 609431 29 100.0 32 ............................. TGAGCGAGCTGAAGCCGTGCCCGTTTTGTGGC 609492 29 96.6 32 ........T.................... CCTCCAGGTACCGGTCCCCCACGCTGACGCCC 609553 29 100.0 32 ............................. GGGGCCCGGGGCGACTGGAAGGACCTGGACTC 609614 29 100.0 32 ............................. GTGACGGTCCCGACGAACGTGCAGGGGCTTCG 609675 29 100.0 32 ............................. CGTCGCGGAAACGGAGTGGTGGATATGATCTT 609736 29 100.0 32 ............................. GTGCCGGGTGCTGGGCTACGCGGCTTCCAGTG 609797 29 100.0 32 ............................. CGCTTGGACGCCACCAGCCGAACGACCAGGGC 609858 29 100.0 34 ............................. TATTCCACCGGATGCCGAACCCTGCGGAACATGC 609921 29 100.0 32 ............................. AAACCGCGCGGGTGGGACGATTCCAGGAAGGC 609982 29 100.0 31 ............................. GCGTTCGCGGCAGCCTGGGGGGCAACGTCCC 610042 29 100.0 32 ............................. GTCAAGGTGGGCGGGGCGGACGTGACGGGGTA 610103 29 96.6 32 ..........................T.. GCGTGCAAGACCGACGAGGAGCGAATCGAGGT 610164 29 100.0 32 ............................. GGGTGCCCCCCGTCCCGGGCGGTGATCTATGG 610225 29 100.0 32 ............................. GAATGAGCCAGATCGCCCAGGAGACCGGACTC 610286 29 93.1 32 .....TT...................... AACGACTCCGTGACGGATCGGGTGGACGAGCC 610347 29 89.7 32 ......T..G.A................. CTGTCCTGGCAGGCCCGGTTCCCGTGGAGGCT 610408 29 100.0 32 ............................. TAGTAGGGCCAGGGTTGTTCGTCGTAAAGTCC 610469 28 89.7 0 .....T..........-...........A | ========== ====== ====== ====== ============================= ================================== ================== 52 29 99.3 32 CATTTCCCCACGCACGTGGGGATGAACCG # Left flank : CTGAGGGATCGTTTCCGGGAGACCCGTCTGCTGGAGCGGATCGTCTCGGACCTGGATGCCCTGTTCGGCTCCGTGGACTTGGCACCGCAAGATGTGGGGCTGATGGATCCGGACGAAGACATGGCAGCCCCTGGAGGATTGTGGAATGGGGATGGCCAGGTCCTTGGAGGGGTCTGTTACGAGGCGTCGGACGGGCCATGATGGTTCTGGTCCTGGAGAAAGTTCCGCCCTCCTTGAGGGGAGAACTCTGTCGATGGCTCATTGAACCCAAAGCAGGGGTTTTCGTGGGTCAGGTCTCTGCCTTGGTTCGGGAGAAACTTTGGCGACAGATTTGCCAGGGCGCGAGGGAAGGGAGCTGCCTTCTGCTCTATTCCTCCAATACAGAGCAGGGTTTTCGGTTTGACGTCTGGGGAAGCCGGGAACGCCTGGTGGCAGATTGGGAAGGGTTGACCTTGGTAACTCGAAGTAGTCATAAGGGTGATTGATCGACATCTCGAAGA # Right flank : AATTTAATAGTCTTTGTATGAAGGGTTTGCCTGGCTGCGCTCTAGCCGAAGAAGCCAAACAACCACAAAATGGCGACGAAGCCCCCGATCTTGCATAGGATCCGCCAGGCATCATGGCACCAGAAAGTGTGAACTTCCTTCGCAAGGGCCTCAAGAGTTTCTTGCGTCCTCGCCAGGTCCGACTCAACAGGGCCAAGTTCCTCCCTTTGTGCGTGTTTCCCATAGGAACCCCGTTGTTCCATGCCGAACACCCCTGCTTGATTTTACTGCAATCCTCACGGGGTATCGTGGTGCATTGCTATCTTTATTTGCAGCCCGAATCCCCGACGAAACGGACCTGACGGTCCTGCGGAAAGGCTGACGGGGTACTACCAGGATCAGGGATCGTCCGGGCACATCGAATTTGGAGCTGGAACGGTTCTTCTCAAGGACTGTCCCCCGGCAGGTTGCCCTTCCCGGGTCCGGGGCGTTTCCCCGCGTGCCCTTCACCCTTTCTCCCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CATTTCCCCACGCACGTGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //