Array 1 1965338-1966165 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_AP019810.1 Enterococcus mundtii strain 15-1A chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
   1965338	    36	 100.0	    30	....................................	ACACCACCAACACACGCCACATCACAAGGC	
   1965404	    36	 100.0	    30	....................................	TCAAGTTTCTTCTTCACTACTAAAGGTTTT	
   1965470	    36	 100.0	    30	....................................	TGTGCTGATATTGAAGGAGTGGAAAGCTTC	
   1965536	    36	 100.0	    30	....................................	TTTTCATCTTGATATAAAGTAGGCTTATAT	
   1965602	    36	 100.0	    30	....................................	CAATTGATGAAATTGAACCAGCAACAGTAG	
   1965668	    36	 100.0	    30	....................................	TGGTTATCAATATACGTTAAAACTTTGTCT	
   1965734	    36	 100.0	    30	....................................	TAAATTATTTGGTGCATGTGACTACGTAAC	
   1965800	    36	 100.0	    30	....................................	GATGTACTTGACGACGAAGGCAATCCAATT	
   1965866	    36	 100.0	    30	....................................	GGGCAAGTGACTGGCGTGTAGCTGGTATAG	
   1965932	    36	 100.0	    30	....................................	CCCATTGATTGAAGCAATGATAAAATCTCG	
   1965998	    36	 100.0	    30	....................................	GGCATATAGCCGTCTAGTTCTCTCCATTCA	
   1966064	    36	 100.0	    30	....................................	AACATACTTCATTAATGATCCTAAAAAGTC	
   1966130	    36	  75.0	     0	......................TC...CATT.CT.G	|                             	
==========	======	======	======	====================================	==============================	==================
        13	    36	  98.1	    30	GTTTTAGAGCTATGTTGAATTGAATGCTTCCAAAAC	                              	       

# Left flank :   AGACAATTGAACGAAAAGCCAGAAGTGAAGTCGATGATCACTAAATTGACAGATACGATCAGTGAACTGATTGAGTATGAATTATTAGACCATGAGATGGACTTGGAAAGTGATGAGATCACGATTTTAGAATTATTCAAGGCGTTAGGAGTCAAAATAGAAACGACGAGTGATACGATTTATGAAAAAATAATCGAGATTTTACAAGTATTTAAGTATCTGACAAAAAAGAAACTATTAATCTTTATCAATGTTTGTTCGTATTTAACGTTGAAAGAAATAGAAGAAATACGATCTTATATTTCTTTATGTAACATGGATGTTCTTTTTATCGAACCAAGAAAAATTGCAGGAATCACACAAACAATCTTAGATAATGATTATTTTTTAATAGATGGTAGTATGGTAGAATAAAAGAAAATAAGTATTCAATTCTGAAGTTTTGCTATGAACGAATCGCGCGATTACGAAACTTTGTCAGAAAAAATTTTTTCTACGAG
# Right flank :  GCTATACTGGATCTCAGTAAAAAGATGATAGTGGGATTCACTAATAAAAAGTACAGAGTCAGAAGAAAACACAGACACTTGTGTTTTCTTTTTTTGCTCAAACTGGACGAAACTCTTTACTCTTAGTAGGATAGGAGTAGAAGAAAAAGTGGGGTGTAAAGATGTTTAGTGAAACGTTGGTCCATTTGTTGGAATGGGTGACTGCGATTTTGAATATTTTCTCGATTTTAGTCTTGTTGGTTGGAATTTTTTTAGTTTTAAAAAATTTGATGTTGGAACGTCCATTGATTAAAGATTATGCGACACGTAATCGGCGCAATGCGGATATTCGAAAACTACTAGCTAGTTACATTTTGTTGAGTTTAGAAGTACTGATCGTGGCAGATCTCATCGAATCTGTCATTAAACCAACTTGGACAGACATTTTAAAATTAGCATTGATCATTATCATTCGCACGATCATCTCTTATTTCTTAAATTTAGAAATTGCGAGTCATGTA

# Questionable array : NO	 Score: 6.16
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTATGTTGAATTGAATGCTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:66.67%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTATGCTGATTTGAATGCTTCCAAAAC with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-2.20,-0.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-9] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.28,0   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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