Array 1 148-5637 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 148 30 100.0 39 .............................. AATCATTGTATCTGACAAAGGTTGTATATATCTCCTGTA 217 30 100.0 38 .............................. ATATTTGTTCATATAGCAGATGATGAAAGCATTGCAAA 285 30 100.0 36 .............................. ACTTATATATTTTTCCTCATTCACACCAAATGTCCA 351 30 100.0 45 .............................. CTTTTTTAACTCTCCCATAACTCTGTCAAAATGCATCTCCTTAAA 426 30 100.0 36 .............................. TATTTATCTTCCCTGAACCTCTTGAGAAACTCCTTA 492 30 100.0 37 .............................. TTGTAGTCGTCCCACTTACTGTCAAATCACCCAAAAC 559 30 100.0 38 .............................. ATTGATGACAATGTTGATGATGGGTTCAGGACAGTGGA 627 30 100.0 41 .............................. AACACTTCTGTCCAACTCATCAAAAAACATCCACTTGTTAT 698 30 100.0 40 .............................. CTAACTACCTCTGTGCATGCCCTCTTATCCCTTGCATAAT 768 30 100.0 37 .............................. TCCTTTTCAAAACCTTAGCCAAAAAATACGGAGCAGA 835 30 100.0 36 .............................. ACAACTCCAAAACCAAAACCATCGACCTCAAGACAC 901 30 100.0 35 .............................. GATAAATGTTTTTGCGGTGGAAGAAGTCCACTGCC 966 30 100.0 40 .............................. CTTTCTATAACCGTTTACGTCGATAAGCGTATCTTTGCCG 1036 30 100.0 37 .............................. AACTCTTAGCCTGTGACGGCGTTATTGTTGCGGTTCT 1103 30 100.0 36 .............................. AACTCAACCCTAATTCTCAACCTATTTTGGGGGTGA 1169 30 100.0 38 .............................. TAAAATTCATGTAGTACTCTTCGATTACTTTGTGTAGT 1237 30 100.0 38 .............................. AACTCTTTCCCCGCTCCTCCGGCTTCTCAACTTCCATC 1305 30 100.0 36 .............................. ATTGAAGGCTCTGGCACGGTGGCAATTGAGATTCCA 1371 30 100.0 37 .............................. AAAGAACGACAACGGAGGAATTAATGAGTCAATATGA 1438 30 100.0 38 .............................. CGGCACAGCTTGATTCTCGAAGTTGGTCACGTATTCGT 1506 30 100.0 41 .............................. TGTTACAGTGCCGTCTTGCAGGATGAAGGCTTTATCAAGCT 1577 30 100.0 36 .............................. GAGGAAATCAACATTGAAGCCAGAAAACCAGTTCCT 1643 30 100.0 38 .............................. CCTATTGGCAGCATACCTCTTGGATACTACTCTGCAGG 1711 30 100.0 37 .............................. GGCTCCGTTTTGAATAACCACTTCCCTAATCTGTGTC 1778 30 100.0 38 .............................. ATCGACGTACGCAAAATCAGACCTCTGAAGGCTCGACG 1846 30 100.0 41 .............................. GTTGAAAGACTGGCAAAGAGTCCAGGAATATGGGAAACTCT 1917 30 100.0 38 .............................. CTCTCCCATGGACACAACCGCATACTCCGAGAAGGTAA 1985 30 100.0 35 .............................. CGTCTTTTCGCTCCTGGCATTCTGGCTTTTCGCCA 2050 30 100.0 37 .............................. GTGTTGCACCACTTTCGAAGAGTGTGAACGGAAACAT 2117 30 100.0 38 .............................. TGGTAAAAATCGAAGAGGTTTGATTGTTCTGGGAGTTT 2185 30 100.0 44 .............................. GGTTGTAGGATGGAGCGAGGATGAACTGAATCGAGCTTGGATGA 2259 30 100.0 36 .............................. ATCAAACTCTGTCATATTCTCACCTTAATATATGTC 2325 30 100.0 39 .............................. TGTAGTAGCTTGTTGGTCTCGTTGTTCTTGATGGGGATT 2394 30 100.0 37 .............................. GAGGACTACAGGGTCTTTTGGATGGGCCACAGGGGTG 2461 30 100.0 37 .............................. TGTTTCTTGAGCACGCTTACGTAGTGCTCTATCCTGT 2528 30 100.0 40 .............................. TGAGCTGCTCACCCTCACTTTAAACCCTCCCGTAATCCAG 2598 30 100.0 37 .............................. ATGGACGGAAACGAGTTCCAGCAGTTCGTAGTTGATA 2665 30 100.0 37 .............................. CTTTAATTGCCCATCTGTCTTTTTTCTTCAATGCGTC 2732 30 100.0 38 .............................. GTTGTTGCGAACGGCAATAACCTTGACATCTATGCCGT 2800 30 100.0 39 .............................. AGAAAGTAAATATTGCTTGGGTCTTGGAAAAGTAACGTA 2869 30 100.0 36 .............................. ATCTCAATTTCAAGCTTTTGGTTACTGAAATTGCTG 2935 30 100.0 37 .............................. GTAGCTTCTTGTTCATTTACTCACCATCCCATAGCCT 3002 30 100.0 38 .............................. TTTCTTTTTCCTGCCCCTCGGGATTGCAACAGCTGTTG 3070 30 100.0 38 .............................. TGCATATTGCACAAACCAGCTTAGAACGCTTACCTGAT 3138 30 100.0 38 .............................. CGTTTCCTTGTAAACTGAGTCCCTCTCGGAGATCTTCT 3206 30 100.0 38 .............................. TACTAAGTCTCGCATCCTCAACCCTCGCAGCCATCGCT 3274 30 100.0 41 .............................. ACAACTTTTTTGGACATTCACATCACCCCGGACAAATCAAC 3345 30 100.0 37 .............................. TTTGTCGGCGGTGCTATTGTTGCAGGCATAGGGCTTT 3412 30 100.0 36 .............................. TGGGGATTTTGACTGGCTCGGGGTCGTCGAGGTAGG 3478 30 100.0 37 .............................. GTCATATTCAGCTGCTCCAAAACAGGCCTGAAAGCAG 3545 30 100.0 42 .............................. ATAGCTCTCTGTAACTCACTTCTTCCCCATACCATGTTTCTA 3617 30 100.0 38 .............................. AGCATCTTCGTCTTCTTTATCCTCTTCAGGAGCTCTAA 3685 30 100.0 37 .............................. GAAGTTTGCGTTTGTTCCAGAAGTTTGTAGAGTGCCA 3752 30 100.0 38 .............................. AATGCTAATCGGATTCTCTGGTCCATCTGCAAGTGGCA 3820 30 100.0 37 .............................. TGCTTCATCTTTCTCCAACACTTCTACAATCTTGACT 3887 30 100.0 39 .............................. AAGACTACGACTCTTGGTAATCCATCGTTGCCTCTAATC 3956 30 100.0 44 .............................. GGAACCCCGTAACTGGCTGCCTTCACGGCTGCGATTACTGCTAC 4030 30 100.0 38 .............................. ATCAAGAGCCCATGCCGTCAGAGAATGCGTTGAGGAGT 4098 30 100.0 40 .............................. TCTGATTTTTCGGCAACAACAAACCTGAACTCAGAATTGC 4168 30 100.0 39 .............................. CCTTATCTCATCCTCAGCACCATAAGGCATTTGACCCTT 4237 30 100.0 39 .............................. TTTCTTCTTTTGATGTATAATCTGAAGACTCAGACGATT 4306 30 100.0 38 .............................. CGAGACATTAACACAATTTATTGGGCATGTCCTGACGG 4374 30 100.0 38 .............................. GCAGACGACGTACACTACTGGGGCGTTGTCAAGGAACA 4442 30 100.0 43 .............................. TAAGAACATCTCATAAACTTGTGTTGGACTCGGTAGCTCCCAA 4515 30 100.0 38 .............................. ATAAAGGGCTTTTCTTGCCATAATTCTATAGCTCTCGC 4583 30 100.0 38 .............................. ACGAACAACTATCTCTGCTTGGTGAAAACTTATCTGAG 4651 30 100.0 39 .............................. AGCGTAACCACCAACTCCAACTCCAGCTCCCAATGCTGC 4720 30 100.0 36 .............................. TCAGGTCTGCGATAATCATCTGGCCGCTCGTCCAAT 4786 30 100.0 36 .............................. CAGAACTCTCCCAACGAGGCTCTCGGCAAACTCAGG 4852 30 100.0 40 .............................. ATCGTCTTCTGGAACGAATGCATCTGCAGGAATGTAAAAA 4922 30 100.0 38 .............................. TTTGATTGAGTGGGTTAAAGGCCTAAATACGGGCTACA 4990 30 100.0 38 .............................. TCTGGAAGTCCCTCGACCTCAGCCCCATTCAGGCATGG 5058 30 100.0 38 .............................. TGGGGATTTTGACTGGCTCTGGGTCGTCGAGGTAGGGG 5126 30 100.0 41 .............................. CGATTTCAGGCCTAAAAACGTCTCTTACTCCAAACCTTGTT 5197 30 100.0 38 .............................. GCTTGAAAATGAAGTCGATGGGGTCCTTAGCCTGGGCT 5265 30 100.0 38 .............................. GTCTACAGCCTTATAGATGTAGGCAAGCCACTCAACAA 5333 30 100.0 36 .............................. CATGTTTTGCATGAAAGGGAACTCCCGCAGCCGGTA 5399 30 100.0 39 .............................. ACAGCAAAGGAAAAGGCACTGCTTTCTGAAGGAGCACCG 5468 30 100.0 41 .............................. TAGTACGGTCGGCCGAGCTTCTCGGCAATCTCTGCATAGTT 5539 30 100.0 39 .............................. CCGTGCGGTGGAAGAGAGAAGGGGGAGAGCCAGAGTCTT 5608 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================= ================== 81 30 100.0 38 GTTGAAATCAGACCAAAATGGGATTGAAAG # Left flank : GAAAATGGTTTAATCGGAAATTGAGTAGGAGGATAAAAGTCGCATGCTATTATAAATGAGATGCACTTTCGACACCTCGCGGAAGTATATAAATGAAAGAAGCCCTCAGAAAACTTTAAATTGGAAATAGAGGGAAAATTACTGATGG # Right flank : GGCAATGGCGACTTTTGCATAGGTGGCAAGCGTGGCAAGAGGAAAAAGATTTTCTAATTTTTTTATGAATGTAGATTATGAAAGAGACGATTCAGCTTGCTATAGGGGTGATGCTGTTGGCCATGCTCGGTTGCTACATCTACATTACTGAGTTCTATCACTACGAATCAACTGAAGAGAGCTCAAAAGCTGCGATTGAATATTTGAATCAGCTTAGAGCTCAGAATGGCCTGCCTCCTGTAAAGTGGAATAAAACTCTTTACGAGTTTGCGCTGGAAAGGCTTGAAGATATGCATGAAAGAGGCTATTACAGTCATTATGACCCTGTTACGCATGAGACGCTGATTTACAGATATGTTGAGGGGTATGTTGGAGAGTGTATCTTGAATGGTGTAAGAGGTACAAATCTTCTCTCCAATGGGCTTCAGTCATTATTTGGCTATGAAGAAGAAGCTATAGATATCTGGTCTAAAAGCACCATGCACAAACTCATTCTCACT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACCAAAATGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.10,-0.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 2 377818-372935 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 377817 30 100.0 35 .............................. ATTAGCAATTTCACTGTTGGCGATGTGTTGGCACA 377752 30 100.0 40 .............................. AAATTATACGTCTCAACTGCTCAACAAATCTATTCTTTAC 377682 30 100.0 40 .............................. AACTTTTGTATAATCTTTATATGCTATCTCCCTAGCTCTA 377612 30 100.0 37 .............................. AGATTCTAGACTGTCGATTCGTAGAAGTATTTCGTGC 377545 30 100.0 38 .............................. TTCTAACTCCCCATCCATCTCAATCACCTCCTCCTCAA 377477 30 100.0 39 .............................. ACTTATAAACCCAACAAACTCTCTATGTGCCGTATCAAT 377408 30 100.0 36 .............................. CATCTTTTCTTTATTCAACTCCTTCAACAAATATGC 377342 30 100.0 36 .............................. GTTGTTAGCTCCAAACTATCCACAACATCATCAACC 377276 30 100.0 40 .............................. CGCACTGACAGCAACACACAAGTATGAGTGACTGTCACAA 377206 30 100.0 38 .............................. TACTATGTTGTGTATGATGGCAGGATTTGCACAAAATG 377138 30 100.0 41 .............................. CCTTTTGCAATCTTCACATTTAGGTGCTTTAATATAAAAAA 377067 30 100.0 38 .............................. CTTTCCAATCTTTAACGCTTCACCACTATCATAAGGTA 376999 30 100.0 38 .............................. CAAACAATATTGCAACTATGTATTCTAATATCAATATC 376931 30 100.0 40 .............................. CTCGTATCTTCATGTCTAATGCTTCTTTCACTTTAGGCAA 376861 30 100.0 37 .............................. TACAATAACATCATTATCAATGTTGCTGGCATAGACT 376794 30 100.0 39 .............................. TGGTTTTACTACTACGCTACAGCAAAGACTGGCGAGAAA 376725 30 100.0 36 .............................. ATCACTGTCCTGCTTTTGTATATTGGCTTTGCTTCA 376659 30 100.0 41 .............................. ATCTCATCCCCTCCAGTCCCTCCCCGTTTTCACTCCGTTTT 376588 30 100.0 42 .............................. TTGTTTAGGGATTTAGTCTCGTCTGAGCATAATACATCATCA 376516 30 100.0 38 .............................. TGAATCGCCAACACCTAAATATAACCATCCCTCCCAGA 376448 30 100.0 37 .............................. TTGAACTATTAGTTTCCTTCTCCTCTTTTTCCTTCTT 376381 30 100.0 39 .............................. TAGGATTACAGGAGGGTTTAAAGTTAGGGTAAGTAGTTC 376312 30 100.0 44 .............................. CGAGGAGTTTAGGGTATGCCGCACGTCATAACCTCTCTTTTGCC 376238 30 100.0 38 .............................. TGATCTGCGGCCTGCTCTCGCAGCCGAGCTCGAAGCAC 376170 30 100.0 36 .............................. AGTTCCAACACTGACGTTATCAAAATAGGAGATTCA 376104 30 100.0 40 .............................. CCTCCTCAAGCTGTATCCAATAGAATTCATCATTACCCCA 376034 30 100.0 41 .............................. TGAGCCCGAGCCCCTCGATCAGGCTCGCATAGGTGGCCTTA 375963 30 100.0 37 .............................. AGTTCCTGAATTCGATGCAGAGCAAGATTGAGAAAAC 375896 30 100.0 36 .............................. GTTTTTGGCGGACTACGGGACTGCCGTCATAGAGTT 375830 30 100.0 37 .............................. TGGTACACAACTTCTGGAGCTTCAGGTACATCATCGG 375763 30 100.0 36 .............................. TCACTCATCTCGGATACCTCAGCGTGGATATGAACC 375697 30 100.0 39 .............................. GTTGCATTGCCAAAAGATGTTCTCAAGCTTGACTTAGGA 375628 30 100.0 37 .............................. TTTGACTGCAGGCGGAAAAGTGTTTCATGTCTGCTAC 375561 30 100.0 36 .............................. CGTAATGAGTCAGGAAGCGGACAGCTTCATGGCAGC 375495 30 100.0 38 .............................. AGAGTTGAGTTCAAGATCTTTCACCATGTCGACGACAG 375427 30 100.0 39 .............................. TTAAAGTGCAGCGAAGCCGAATCAGCCACTTCAACGTAA 375358 30 100.0 36 .............................. TGCGTCGTTTAGGTCTTCAATGAACTCGGCGGGGTC 375292 30 100.0 40 .............................. ATCTGTTCTTTATGCGTGAAGTGTTCGCTTATTATAGCTT 375222 30 100.0 40 .............................. AATACAAACTGACATTAACAACCTAATAACGGACTACTTG 375152 30 100.0 37 .............................. TAACACCAGCTTTGCCATACGTAATACTTGAGGGAAT 375085 30 100.0 37 .............................. TATGCATGGGTTATTGGAATCATAATGACTGCACTGT 375018 30 100.0 39 .............................. ATTTCCCAATACTGCATGACATTAACAGCATGTGGTAAC 374949 30 100.0 39 .............................. TCTGACGACCTAATAACTCAAAACAAACGTGAAGAACTT 374880 30 100.0 37 .............................. GTTTCACCGGTTCCTCCTCCATTAGCAGGCTGGCCTT 374813 30 100.0 39 .............................. ATCTTCATCCAGGCGCTGAGCTACGCAACCGTCCTGCTT 374744 30 100.0 41 .............................. CGGTAATATCGTCGCGCAGGATCCGCAGGATCGTTCCTCTT 374673 30 100.0 45 .............................. ACTGACATATTTTGGTCAATGCATGCGCCCTCTGAGCGGAGACGT 374598 30 100.0 39 .............................. TGTACTTCGACTACACGACCTTAAACCTGTCGGACGACA 374529 30 100.0 38 .............................. AAAATGGGTTTGGAAAAACGCATAAGATATTTGGGTTC 374461 30 100.0 35 .............................. TTTTACATATTGTGATTCCAACCAAAAATGATCCA 374396 30 100.0 37 .............................. TCGGACTTCGAGGGGTTTGACTGGGTGATAGTCGGAG 374329 30 100.0 37 .............................. TGGCATGGGAAGAAATCGTGGTATCTTGTTTTGCCGG 374262 30 100.0 38 .............................. TTTGACTGTAGTTGTGTTTCCAAATCAACATATCCTGA 374194 30 100.0 38 .............................. AGACAGATTATATGCTCACCACGCAATCCTCCATCTTT 374126 30 100.0 41 .............................. ATGCAAGTTCAGCAGGTGCATAAAGGATAGATGTTTCTCTG 374055 30 100.0 40 .............................. AGACATACAGAGACATAAATCTTGGAGTAAGCAGACTCAG 373985 30 100.0 42 .............................. AATATACCACTCTGGCCGAATCGATCAGAAGAGAACTGACAA 373913 30 100.0 37 .............................. TGGAATGAAGTTAAAACCCTTATCAACGCTGTCTATC 373846 30 100.0 38 .............................. GGAGTTGCTTTGACTGGTAATCTGTTCGATCAGATTGT 373778 30 100.0 37 .............................. CATAATCTTCTTGAAAGTCACGGGAATGTGGAACTTC 373711 30 100.0 38 .............................. GAAAGGATACAAATGTCAAACAACCGATAGTTGAGAAG 373643 30 100.0 36 .............................. GACGTCGTGGAATAATGCGACAAATATGGCTTCATC 373577 30 100.0 41 .............................. AAAACACTTTCCACAAGCGCTTAATCCGCCACGTCAATGTG 373506 30 100.0 38 .............................. GAGTTTCAGAAGATGGCGGAGGAGTTGAGATTACAGTC 373438 30 100.0 37 .............................. GGTTCTACCGAGCAAAGAGCCCGACCGAGAGCTTAAC 373371 30 100.0 38 .............................. TAGCCTGCCACGTTCCTGCTAACTCCCCATGCCAGAAA 373303 30 100.0 37 .............................. ACACCAGAACGGCAAACAGAGCTCTCATCCTCCCCCC 373236 30 100.0 38 .............................. TCATAATCGCTTTCCTGATAATGCTGTTAATTCCGCAT 373168 30 100.0 37 .............................. TATTCGTGTATCAGGTGTTCCTGTTGATTCCGGGCCT 373101 30 100.0 39 .............................. CAGTTAGGACAATATACTACTGGTTGAGAGCACATGAAG 373032 30 96.7 38 .........................A.... AGCTCTTGGCCTGCCTCTGAAAGCTCGGAACACAGTAA 372964 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================= ================== 72 30 100.0 38 GTTGAAATCAGACCAAAATGGGATTGAAAG # Left flank : CCTGCAGTTCAGAGCCCTCTTTCTGTCGGTGAGGGTGCCATCTATGTCAACTGCGATGGCCTTTGGTTTGAACATGATTCCTGTTTGGGGTGTGGGTAATTAAGATTAAGGGTTTTATTGAGAGTCAGTGTGATTGCAAAGCAAGAGGAAATAAATTGAGTTTAGATTTTGGCCAGTTTTAGACCGTTATTCTGCGAAAAATCATCTCAGAGTGCTTGTCACAGTAATTTATCTTGAGTTTTAATTGGGTAGAATTATGTTTTATATTTGGTTATTTTTGGAAATGGATTGTTTTGATTATTTTTTGGCAGGATAAGCTTGAGGAAAAGATTTTAAAGTAGAAATAAGTTCCGGAAAATGGTTTAGTAGGAAATTGAGTAGCAGGATAAAAGTCGCACGCCGTTATAAATGAGATGCACTTTCGACACCTCGCGGAGGTATATAAATGAAAAAATCCCTCAGAAAACTTTAAATTGGAAATAGAGGGAAAATTACTGATG # Right flank : TGGACGTGTAAATCTTCTTTTCGTCATCAGAGATATCTTTTACTTGGACATGCTTCTTGAACCTCCCAAACTCAACGAACAGAACTAAATGCGGGGGGAGGGATTCGAACCCTCGAACCCCTACGGGACAGGACCCTCAATCCTGCGCCTTTGTCCGCTCGGCAACCCCCGCTCAGATGAAAAATTCTGCATAGGATTTATGAATATTGTGGTTTAAAGGGCGATGACTTCATATAACTTTGAAATCCACCTTCTACATGAAAGCCGTAATGCTCCTGAGTGGTGGGATTGATTCCTCAACACTCCTTTACTACTTGCTCGACGGAGGTTACGAGGTTCACGCTCTAACGTTCTTCTACGGCCAAAAGCATTCCAAGGAAATCGAAAGCGCCGAAAAAGTTGCAAAGGCTGCTAAAGTTCGACATCTCAAGGTCGACATCTCTACAATTCACGACCTCATCTCTTACGGGGCCTTGACGGGGGAAGAGGAGGTTCCAAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAATCAGACCAAAATGGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-1.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA // Array 3 542310-539157 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== =============================================== ================== 542309 24 100.0 39 ........................ TCCGTTATCTGCCCAACTGTTGCCCTGCTCCAATCCTCA 542246 24 100.0 39 ........................ GCTGTGTTCACGTCCGTATCTGGAAAGTAGCTGCCTTCG 542183 24 100.0 38 ........................ TTTCCTCAAGCACCTGTTTCCTCAATCTCTTATTAAGT 542121 24 100.0 39 ........................ TTTTCCAGTAGGCTATTACAGGCTCACTTCTAATTACAC 542058 24 100.0 40 ........................ ACACCAAACTGGTTCAACCCAACTACCCCACTCATCTTAT 541994 24 100.0 39 ........................ GTAGTTGGCCCACCAATGCCCTCGAGGACATCTCTAACA 541931 24 100.0 40 ........................ TTACGGTACAGCTTATCCTCCGGGACGGCAATCTGCACAG 541867 24 100.0 42 ........................ TTAAACACCGTCTTAACAATGGGAATTCCACCAACCTCTGCA 541801 24 100.0 40 ........................ GATGCATTCCTCATCCGCATCAGCATTTTCAAATTTCTTA 541737 24 100.0 35 ........................ TTCAGTATCTCGAGGAGGTAGTTGTATGGCATGTG 541678 24 100.0 37 ........................ TAGATAGTCTGCAAAGTACACCATTTCGTTTGTTTCA 541617 24 100.0 39 ........................ TTTTTCGAGAAATCTCTTGGGTGGTACATGTATACCATA 541554 24 100.0 42 ........................ GAATTATCAATGCAAGTGAACCGCTTTGCCTGTAGATTTTCG 541488 24 100.0 39 ........................ GCTGTTTTTGTGCTCGATAACTATTCTACCCCTCTCAAA 541425 24 100.0 41 ........................ TACTTGTAGTCCTCATAGAATCCCTTAAGCTTCTCTCTGAG 541360 24 100.0 43 ........................ ATATGCTGAGAACTGGTCATATTACACCTACGGACACTACTGC 541293 24 100.0 39 ........................ CCATGTGTCCTCCTTCCACACTAGGACTTCTCCATTCTG 541230 24 100.0 37 ........................ TTTTCTGGCTCAAGTTTTCCTCCGACGTCCACGACTA 541169 24 100.0 40 ........................ CGATGGGGTTGTTGCACCGCTCTGGAATGCCATCTTTACC 541105 24 100.0 38 ........................ CAAATTCGTGGTTAAATATTCTGAAATGGTATCTCCAC 541043 24 100.0 37 ........................ CCAAATGGGGTCGTTGCTACGCTGTACTCGTTGCTTG 540982 24 100.0 38 ........................ GATAGAAATACCGCCCGTTAATCCGCACTCTCTTGATA 540920 24 100.0 39 ........................ TAAAATTTCGTGGGTGGTAAACATACACCATATTAATAA 540857 24 100.0 38 ........................ GATTTTATCTGCCTCAGTTCTCACTCGGTCATCATATA 540795 24 100.0 43 ........................ GTTGTATCATCCCGTAATCTCTCGGTGTTCCAACCACTTACCA 540728 24 100.0 40 ........................ TGTTTTAGGACTCCATCTTCCATTTTATCACCTACCATTT 540664 24 100.0 39 ........................ AATCTTCTGCTGTTACAGTATTCTTTACCCATTCAACCA 540601 24 100.0 36 ........................ CAAGTACAGGCACTCTCACAAACGCCAAAAAATGAC 540541 24 100.0 39 ........................ GACAACCCCACTCAGGATCAACGTAAATAACACTTTTAC 540478 24 100.0 41 ........................ TCAGCTGCCAGCACACTGTAAATCCATCTTTTTCATTGTTG 540413 24 100.0 42 ........................ CATAATTCTCCTTGGTTAGCTCGTGTCGGCTTATCCAGACAA 540347 24 100.0 41 ........................ TTATCTTCGCCCTCATCCTATCACCTTCTTCAACTTCTCAT 540282 24 100.0 41 ........................ CAATCATAGCATCTCTCACTGCATCTTCCATTTTCACCTTC 540217 24 100.0 42 ........................ ATAGTTGTTACTATAACCTCATCACCAAAGTCTTCAAGAATC 540151 24 100.0 41 ........................ TCAGTAATTTCCTCCCCCACCAAAGCTTCAAACTCGTGCTT 540086 24 100.0 38 ........................ AAGGAACTTCTCCTTCGCCTCAAGTCTCGCTTCTTTAA 540024 24 100.0 44 ........................ GATTAGTCTTCCTAAGCTTATACTTCAAACTCTGCACCCTCTCC 539956 24 100.0 37 ........................ TAATAACTATTCTGTCATAGTCCATTCGTCCCACCTC 539895 24 100.0 47 ........................ TAGTAGCCCAGCTCGTAGTTACTCAATTCAACCATCTTCTCCATGCA 539824 24 100.0 38 ........................ GTAATAGCCTGCTGATTCAAAGGCTACTAAATACCAAT 539762 24 100.0 41 ........................ AGATTCTCTTGACCTCCTCGGCAGGAATTCTATACTGCCCG 539697 24 100.0 37 ........................ TTACCAAACGCCCTGCTAAGTATTTCCTCATTTTTTT 539636 24 100.0 42 ........................ AATATATCCTCGCAGTCATCTATGCCTTCATTAGTTGCTCCG 539570 24 100.0 38 ........................ GAGGAGTATCCTAGCTCCGGATGCTCCTCTATCAGTTT 539508 24 100.0 39 ........................ TAATTCTCAGCGCTTCACCCTCGTCAGGAGTCAAAGTAA 539445 24 100.0 41 ........................ CCGTAGTTGCCACCCTTGCCGTAGTGAGAGCTGAAAACCTT 539380 24 95.8 41 ........C............... CCGTAGTTGCCACCCTTGCCGTAGTGAGAGCTGAAAACCTT 539315 24 95.8 42 ........C............... CCAAACCTCTCAATCCAGAACTCCCTAAACTCAGGCACATTC 539249 24 95.8 44 .......................T TCAGCAGGTGCACATCCTCAAAAACCTCCACTTCCTCATCCACG 539181 24 79.2 0 ..............T...TC.C.T | G [539165] ========== ====== ====== ====== ======================== =============================================== ================== 50 24 99.3 40 GAATCTCATAAGGAGAACGGCAAC # Left flank : GGAGGGTAATCAAACTCGTTGTGGAATACGGTGATAAAAAAGTTGAGGCTCCGTTTACGAGGGGTATAAAAAATTATGCTGTATCGATAATTAACAAGATCCATCGCATTGGTGAAACCGGATTGGTTTCAGTTAAGATTGACAGAAGAAAGTGCTACAACTGTGGGTTCAGGTATATATGCAGAGAAATTTGAGATAATGATGTTTAATAGATTTTATGGAATGCAAATTCATTGGAAATACAACCGAAAATTTAATCATTAACTTTGGAAATAAAAAAGTTGCATGGCTTACTATGGATTTGTTAACTTCCCAAATTTCTTTTTCATTAATATATCTGGAGTGAGCTTGTTATTTGAATTATAACTGGATCTAACCTCGTTTTTAAAATTGGCTGCTCTTTATATACTCAGCGTTCAGATGTGCTGCAACCAGTGACCTGTGAAAAAAGCAGCAAGGAAAAAGGATATTAAGGTGGATTTGAGAGATTTGAGTATGGG # Right flank : CCAATTCCAGTATCTAGCAACCCAGATCAAAAATCAAGAACTCCAGAAAAGTGCATTGTAAATTACAACTTTCTCCTTCTCAAATGCTATATAATAACATCTACTTTAGGCCTATTCTTCATAAAGAATTGCATGAAGAGGAATTCAGCGTACAAGTACATAGTAACCCTCGGAATTGCCAGATCTCTGTAATAAATGTGCAGATCTTTCAATCCGAATAAAGCCTTAGATGCCTCGAAAAGAAACTCGATCTCGGATCTCGTCCCGGCAAAATCTTCGTAATCGTTTATGCTTTGAAGGCCATCTTTATTGTCTCGTCCAGATCCTTAACCGGATCTTCAAAAACGCTGGAATAACGAGAGTCAAGCCTCAGTATATCTTTCCTCTATTGCTTTTCTTCCCTATATCATCCGCAATCATGAAAAGAAATTATATGTCCTTATTTTTAAATTTTCATTTATTTGCTTTCTTTTTTGAATTTAATGGATTTTAAGGTTTAT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCTCATAAGGAGAACGGCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 4 557131-555259 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= ============================================= ================== 557130 23 100.0 40 ....................... CAGAATGTATGATAAACGCTTGTGTCCGAAGAACTCCATT 557067 23 100.0 43 ....................... CTTAAGCTTGTTGATGGCGGGTTAGCTTTAAGCACTGAGTTGT 557001 23 100.0 42 ....................... CTATTTCCAACCGAGGTTAGCAACTTTCAGTCCTTCAAGGAA 556936 23 100.0 42 ....................... TACTGACGTTAACGGTGTTTGTACGCTTGGTGAAGTCACAAA 556871 23 100.0 44 ....................... TCTTGAAGCGTCAGCAAGCTTGTCCTTGAAGGTCAGTTCGTCAG 556804 23 100.0 43 ....................... TAAAAGCATTAATCTTGTTCTAGCGGTGATTAGGGAAGCGTAA 556738 23 100.0 40 ....................... GGCAATAGAAACAACGTCGGCAGGGTCGGCGAGCTTGAGG 556675 23 95.7 43 ...........A........... GCTGCTTGGCGGGCTCTCTTTGCTTCTTCCCTCTTGCTTCTCA 556609 23 100.0 41 ....................... TTGAGAACAGTAAGACCACTGTCCCATGCATCGGTTACGTA 556545 23 100.0 39 ....................... CAGGATTGTTCCCGTTGTAATGTCGCCTCCCGTGTCAAA 556483 23 95.7 41 ..................A.... CGATAACGCATTGGGTTTATGTAGCCGACGAGGTTCTTTAC 556419 23 100.0 40 ....................... CAGGTGAACCAATTGAAACGACTTTTAAGCCAGCATATGA 556356 23 100.0 32 ....................... CATTGTTTTGTAGTCAAAGTACATACAGGCTA Deletion [556302] 556301 22 82.6 42 TG..A-................. CATACAGTTTCCTTCTGGTTCTGGATACTCTAATACAACCCT 556237 23 100.0 45 ....................... CACACTATATGAAGATAGGTTGTACTGGTTATGTAAATTAGCAAA 556169 23 100.0 41 ....................... CTATTTGTGGGATGTAGTAGTCTTTTGGTAAACTGTCTTTA 556105 23 100.0 41 ....................... CCTTACTTCCGGACTAATTAACGCGTCCGCGAGTTCTGCCA 556041 23 100.0 42 ....................... CAAATTTCCTGCTCTGTCAGCACGACAACCACCTCAAAAAAA 555976 23 100.0 44 ....................... CTAGACCATCACCCGCAATCATTGGAACTCATTGAAATACTCGA 555909 23 100.0 41 ....................... CAATCTGGTCCAGAACGCGCTTGACTTCCGTCTCCTGCATA 555845 23 100.0 40 ....................... CTAAAGGAAGCACAAGAAGGCTGGAGAAGCGAAATAAAGT 555782 23 100.0 43 ....................... CTCTTCAGCTCTCAGGCTAAGGATGTCGAGCAACTCATCCTCC 555716 23 95.7 37 ........C.............. CTTCTCTCAGCAATTTCCGATCCTTTTTTGAGTCGAA 555656 21 87.0 36 ........C........--.... GTTTATTGTATAATCTCCATCCATCACCTATTTTAC 555599 23 91.3 44 CT..................... CCGGTTCAGAAATCTGAGGTCTGCCTCGTTTGCGTTCTGCTTTG 555532 23 95.7 42 ........C.............. CTACTTGCTCTCCTTCTCTTCAATTCCCTCAAACACTGCCTC 555467 23 95.7 38 ........C.............. GCTTTTCGCACCAGATCATACTTTAACCCCTTTAACTC 555406 23 91.3 42 ........A...A.......... GTCGGTAGTGGCGAACCCATGTTTAAAGTCGTCTTTGCAATA 555341 23 100.0 37 ....................... ACATTTAGCTGTAGGTTAAAAACTCGTTTTATGTGGT 555281 23 91.3 0 ...........A..T........ | ========== ====== ====== ====== ======================= ============================================= ================== 30 23 97.4 41 GAATCTCATAAGGAGAACGGCAA # Left flank : TTACCTATTTGTGCTGAGAAAAAGGAAAGAAACCTGGTAGCAATAGATGAAACAGTTGTTAAAGCTAACGGGAAGCGTTATTATGTTTATTCAGCAGTTGATGTTGAGAGGAATGAGTTAATTCTGATGAGGGTTTATACAACAAGAAACTGGCTCGTAACGAGATCTTTTATAAAAGAAGTGCTGAATTACTGCGAGAATAAACCGAAATTCGTTATAGGTAAGGCCCCTTGGTTGGTTGATGCTTTAGAGAGCATGGGTTTAGAGTATGAGCACCAAACCTTTCGGTGTAAGAAGTTTGGTTGAATCTGTATTTTCTTCTTTAAAACAGAGGATCAGGATCTTCTTCTGCTCGATTAGCTGTTCGAATCCAGTAAGGAACTGGAATCTTTTCTGTAAGCTGTTTATGCTTTATTACAATCGGCTGAGGTGGTGTTTGTGTTAAGTGGACACGTCCACTCATTAGTTCCGCAAGCGTTAAAGGATCATTAGATATTAGA # Right flank : GGAGGGATAGTTATGTGATTATGTGATTGGAATAGCCTTGGAGTTCGTGAAATGACTGTGATACCCTTCACTCACTGGAATCAAAAACCAAAAACGTTTACCGGACTCCCATTACCGGATACACTCAACGAATCTTGCCAGGTCCGTTTTCCTTATCCTATTATACAGTTTGCTATCTGTCGTAACGAGCTTCTCATTCAACCTGACGGCCAGACTGATGAATAGAGCATCGTATACGCTCACATCGTACTCGACAGCAAGCCTTACGGCGTCGACGAGACAGCTCTCTGTACTGTACACCTTCGACGTGTTTATCAACCTTTTAAGCGCCTCCGTCCTCTTTACAGCATCTCCTTCGGTGATTCTCCCCATTTTCATGTGCTTCCATATTACGTTTCCAGCCTCTGCAAACGCGAGGTCGAGCGTTGACTTTTCAGCAATCATGTATTTCTTGCACTCCTCGTAGAATTCATCCTTAACCACGACGCCCGCATACACGC # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATCTCATAAGGAGAACGGCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 5 557885-559370 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================= =============================================== ================== 557885 23 100.0 40 ....................... ACTGAATAAAGAGACTGCGGAAGTTCACGTTGTCAGAGAG 557948 23 100.0 40 ....................... AAGGAGGTGAGAGAAATGGATGTTGAAGTCATCAGGATGG 558011 23 100.0 42 ....................... TAAGGATAAAAAAGGCGGTGCAAGGGTTTATCTTCCTCAAAG 558076 23 100.0 41 ....................... TCGACCGAGGACAATTACATAAAAATGAAAAAAGAAGCAGG 558140 23 100.0 41 ....................... AGATAGTCATGAGAGTTGGGACTGACTTAAATAAGTTTATG 558204 23 100.0 44 ....................... CAGGAGATGGCGAAGAGGAAGAGGAAGGGGGAGAGTTACCACCG 558271 23 100.0 41 ....................... TTATCTCAAGAGAGATTAAGAACTATCAGAAGACCCTAAAG 558335 23 100.0 38 ....................... TCAAAAGGTCATTCAGCATGCTCTTCGGATTTACAGAA 558396 23 100.0 40 ....................... CAGATCTTAACGCTCGCTATGCAGACAGCAACCTCGCAAG 558459 23 100.0 47 ....................... TGAGCGGAGAGATCGACCCATTCGGTACGGAGTACGACATCGTTAAA 558529 23 95.7 39 ..T.................... GAAGACATATCGGGTTATGTGCCAGCGTTTTTGAGCAAA 558591 23 100.0 37 ....................... TCAAACCGAAAGAATACTGGGAGGAAATCCAGAACAA 558651 23 100.0 40 ....................... AGGAAGTGTAGGGGGGTCGGAAGTGGAAGAGCGAGTTAAA 558714 23 100.0 39 ....................... TACTAAAAAGTATGCAGTTGTTAAGTCTGCGTTTAAGAA 558776 23 100.0 47 ....................... TGAGCGGAGAGATCGACCCATTCGGTACGGAGTACGACATCGTTAAA 558846 23 95.7 38 ..T.................... GTCGACATCCGCCTCAACCAGCACGGCAACGGCAGGAA 558907 23 100.0 40 ....................... GCAGATCTCTTTTGACTTTATTCTCTTATCCACGATTCTA 558970 23 100.0 35 ....................... AAAACCGAGCAAAGCTAAACTAAAGCCAACTATAA 559028 23 100.0 41 ....................... CGAAATCACCCGCCGGCGGTGTTAGCGTATGCGGTATTCTA 559092 23 100.0 42 ....................... TGATGTAATATGGCAAGGAAGGGAACGAGAAGCCAGATTATA 559157 23 100.0 38 ....................... TTTTGATAGTACCGCTCGACGATGTGGTGTGTATGCTA 559218 23 100.0 42 ....................... TGGTGTAAATGTGAGCAACAGCAACGAAATTGTTTGAAAGCA 559283 23 100.0 42 ....................... AAATACGAACTCGTCTGAGAAACAATTAAGAAAGACCTTCCA 559348 23 100.0 0 ....................... | ========== ====== ====== ====== ======================= =============================================== ================== 24 23 99.6 41 TTGCCGTTCTCCTTATGAGATTC # Left flank : AGCATCAACCAACCAAGGGGCCTTACCTATAACGAATTTCGGTTTATTCTCGCAGTAATTCAGCACTTCTTTTATAAAAGATCTCGTTACGAGCCAGTTTCTTGTTGTATAAACCCTCATCAGAATTAACTCATTCCTCTCAACATCAACTGCTGAATAAACATAATAACGCTTCCCGTTAGCTTTAACAACTGTTTCATCTATTGCTACCAGGTTTCTTTCCTTTTTCTCAGCACAAATAGGTAATTTCTCCTCGAACTTCTTTATCCAGCGATGAACTGATGATTTGGAGACGGGATGAACCTCTGAAAGAATTCTGGCTGTTCTTCTAATTGAAGATGTTTGGATGTAGATTGCTATTCCGAGAACTTTTACTTCGAGAGGTATTTTGTTCCTCTCGAAGACTTTAAGCTCCTTTACAATTTCCTTGACTGATTGCATATTTAAGAATTATTTTGGTTATTTATTTGTTTTGGTAATGGGGACATGTCCCTAATGAG # Right flank : CTTTCAAGTCCTTGATCTCAGATTTAAAATTCATCAAAAACAAAAAGAAATGGACAGGACACATTCAGGGAAAGGCGATGGGAGAGATCCCCGAAGAGGACTTCAACTTAATCCTGAGCATGGCATAATGTGGTGCAATATAAAGCACACCTGACACCTGCACATTCCGGTAAAATTTAAGTAAAACCGGTTCTTACTCAAAGTATGGTTAAAGTGAAGACGTCATCGAAAGGCCAGATAGTAATACCTAAAGAGATCAGAGACAGGCTCGGCATTAAGCCTGGAAGTGTTCTGAATGTCAGCGTTGAGGGTAAAAGAATAATACTCGAGCCATCACCTGAGCCTCCAGACGTATTCGTTGAACTCGGAGATGAGTCTGAGAAAATCCTGCAGGAACTGAGAAAAGAAAGCGAAGATAGAATAAAGAAGCTGCTGAGGGATCTCGGTGTCAAAGATAGCAGTTGACACCGGAGTTTTTGTCGAGTACATCAATAGGAAAG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGCCGTTCTCCTTATGAGATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA // Array 6 1849400-1856235 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP006577.1 Archaeoglobus fulgidus DSM 8774 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 1849400 37 100.0 38 ..................................... CACTCCAAGCCCCTCCTTTTCTATATCTCGGAATAACG 1849475 37 100.0 38 ..................................... AAGCAGGATTTGATAAGAATACTTACTGGCATACTTAA 1849550 37 100.0 39 ..................................... TCACCAAACTTCTCGTCCATCCAATCCTTCCACTCATCA 1849626 37 100.0 37 ..................................... TTTGACGGGTGGGTAGATGACATTACTCCAATAATAC 1849700 37 100.0 38 ..................................... TAATAAGAAATTATGTAAACACTTGGGTGAATATAAAC 1849775 37 100.0 38 ..................................... ACATTGTCATCAATCAGCTCACATAAAAATATTAAATC 1849850 37 100.0 41 ..................................... AAATCATGTGCTTCAAATGTTATGTTATACACTGCATTTTC 1849928 37 100.0 38 ..................................... TCTCTCTGCCCCAGAATCCCTGCGATTTCCCTGATTAT 1850003 37 100.0 38 ..................................... CAAGTTGCTTCAATCTATCTTCAACCTGCTTATACCAT 1850078 37 100.0 37 ..................................... ACAAAATCGTCCCCCGACAACATCGTGCCATTCATTA 1850152 37 100.0 37 ..................................... ATTTCTTCATAATTCTCAAACTCAAACCTCAAAATTA 1850226 37 100.0 38 ..................................... ACAATAGTTGAAATCCCATTCTTCATCGCTTCCTTTAT 1850301 37 100.0 39 ..................................... TTAAGTGTATATCCAAAATCAAATCTTAAATCATACTTG 1850377 37 100.0 38 ..................................... CCAGTAACCTTTGTATCCCATGTTATCAATCTCATCGT 1850452 37 100.0 38 ..................................... TTCCATACTTTGCAATGCTTTCATCATCTGCTATATGA 1850527 37 100.0 37 ..................................... GACCTACTACAAACATCCTCTCATACGTAATATAACC 1850601 37 100.0 37 ..................................... CGTAATATTGCCCCTTCAACTCTGTTTTTATATTTGT 1850675 37 100.0 39 ..................................... TAATATACTCAACAAATCCCTTAAGCTCTGGCACTCTTG 1850751 37 100.0 37 ..................................... TCTATACTGTCGATTCGTGGAAGTATTTCGTGCACAA 1850825 37 100.0 40 ..................................... ATTGATAAGTTGGAAGTGTATGATGGTGAGACATGGGAGG 1850902 37 100.0 37 ..................................... ACATCCACTTTCATACTACCACCCCCAACTCAAATAT 1850976 37 100.0 39 ..................................... GAGAGAGAATGCGAGTGCTCAGAGACAGATTGTATGAGA 1851052 37 100.0 37 ..................................... ACATCAATACCCTTCTCTCTACAAGCTTCAAAAAATT 1851126 37 100.0 38 ..................................... CATCAAACTCATATTCCTTAACAACAACCAAAAATGCA 1851201 37 100.0 38 ..................................... TTGCTCTCTCCTTATTGACTAATCCAGCAATAAAATCA 1851276 37 100.0 37 ..................................... AGTTATTTTTTGATGACTTTGAAGATGGCATATACTC 1851350 37 100.0 40 ..................................... ACCAATTCTCTCTCATCAATATGTGCTCCACTAATATTCA 1851427 37 100.0 38 ..................................... TGTAAAAACCTTCTTTCGTCTAAACAACACACCCTTAT 1851502 37 100.0 39 ..................................... GTTAACTTTGTCCCGCACAATATTTCTGCAAACAATACA 1851578 37 100.0 36 ..................................... CATATATTAAATATGTCATCCACCTCTCCATATACG 1851651 37 100.0 38 ..................................... ATAATATATCCAATACGCTGCTCTGTCAACACTGACAT 1851726 37 100.0 37 ..................................... TTGGAGAGACTGTTGCAAGGGGACTTGCCTATCAGGG 1851800 37 100.0 37 ..................................... AAACCCAAATATTTGCTCAAATGCTTCCCTAACTCTA 1851874 37 100.0 37 ..................................... GTAATTATGAATACCACTCCATCTCTCACCTTGAACA 1851948 37 100.0 40 ..................................... AATATCCCTCTAACCCAACCATGCCATGTCACTGTCGAAT 1852025 37 100.0 39 ..................................... TTATGCCTATCACTAACAGACTGCATGAGAACCCCCTTA 1852101 37 100.0 38 ..................................... TAGAAATATATTTTGGTTACAAGGTGTCACGAATATCA 1852176 37 100.0 39 ..................................... TTATCATTGGGTCTTTCAACCCCGGTATGGGCACTTCAA 1852252 37 100.0 39 ..................................... AATCATCGAGTTTGCTCTCGATGACATTAAGCTTATTTT 1852328 37 100.0 39 ..................................... TCAACTTCTTTAACCTTCAGCACCAGCTCGTCGTCCTTC 1852404 37 100.0 38 ..................................... ATATCGTCAACTCCTTGCCCATCAATACTATGATTGGC 1852479 37 100.0 37 ..................................... CCATACCAACCATCTCAACCACCTCAACTTATCTTGA 1852553 37 100.0 38 ..................................... TTATACCTGTATGCTTCATATTCCACAACCTCAACCTT 1852628 37 100.0 37 ..................................... ATCTCTGCATCTACACCAAAAAACCCAAACGGACTAT 1852702 37 100.0 37 ..................................... TCGACTATGCCCTTGCAAACATCGCAATACTCTGCTA 1852776 37 100.0 37 ..................................... AGATTATGTCCTCCTCACTTCCCTCAATCCCAGCCTT 1852850 37 100.0 39 ..................................... TGATTAGTATCCCTGTCAGCACTCCAACGACATTGATGC 1852926 37 100.0 37 ..................................... TATTCCAAATGATTGGCACAATATAACCAAACTCCTC 1853000 37 100.0 36 ..................................... TTGTTCTCCTCAAACACACTTGATGTGTATAACCGT 1853073 37 100.0 38 ..................................... CTGATTATTCGTGCCTTTTTGTGCGGCTTCCATTCATT 1853148 37 100.0 37 ..................................... TATTAGCATGTTTTGCATATGTTATGGCACCAGATGG 1853222 37 100.0 37 ..................................... TTATTGTTGATTCGCTTATGTGGTAGGCCTTGCAGAT 1853296 37 100.0 39 ..................................... GTCAGCAAATCTTCTCGTAACAAAACCTCATCCACCTCC 1853372 37 100.0 38 ..................................... GCATATTCTGGATAATGCTTCTTTGCCCACTCCTTAAT 1853447 37 100.0 36 ..................................... TATATGGGTAAATTGACAAAATGCATGAGAAGGCAA 1853520 37 100.0 40 ..................................... ATATTAACATTCAAACTTGCTCCATCCGCGCTACAACTCA 1853597 37 100.0 38 ..................................... TTGTTGCACTCTGCAACCTTATGTGCTGCATCTTCCAA 1853672 37 100.0 38 ..................................... ATAAAGCGTCTTTAACAATCTCCACAGTTAATTTCGCA 1853747 37 100.0 37 ..................................... TTCTACTCCCACAATCCTCACAAACCTCTACAACCTC 1853821 37 100.0 37 ..................................... ACCAACCCCCAATCCATCATACCACCTCATTCATCGT 1853895 37 100.0 37 ..................................... ACATCATCTGCTATCTGCTTCAACTCATCTGGCTCAT 1853969 37 100.0 37 ..................................... TTGCCTTCCCAAGCGCCACATTTGATGCATCTATCTT 1854043 37 100.0 39 ..................................... TATACTTGCTCTCTTCCTTCAGCTTGTGCCACTTCTCTG 1854119 37 100.0 37 ..................................... ATCTTTGTCCCATCTGACATTGAAACATATTCCCGCA 1854193 37 100.0 38 ..................................... TTAATCCATTTTGCAACTCTCCATGCAACCTTTCTTGC 1854268 37 100.0 38 ..................................... ACCTCACCCACCATGTTGACCACCTCAAAAAATATTAG 1854343 37 100.0 38 ..................................... CTAACTGCAGGAGCGTTGCCAAAGTGCTCCTTAATGGC 1854418 37 100.0 34 ..................................... ATTAACTTCGCAAAGGATTGTTACCGCATAGTCT 1854489 37 100.0 37 ..................................... ATTGTCCACGTGATAACTAAATCGTCATTTGGGTTAA 1854563 37 100.0 37 ..................................... TTATTCTCGTTATCCAGTTAATCGCTCCCTCAAATTT 1854637 37 100.0 38 ..................................... ATTCTACGCATTTGCCGTTACCGCAACAGGTGTAACAA 1854712 37 100.0 36 ..................................... AAATGTAGCTGTGCGTTCGCTCTGCGTATTAAAAGT 1854785 37 100.0 37 ..................................... ACACATCGTTGAGTACGAACGGTGGAGACGTAATTGT 1854859 37 100.0 38 ..................................... TCAACACTTTGATGATCTGTGTGGCTACTTTGTCCAAG 1854934 37 100.0 36 ..................................... TCAAAAATGGAGCAGTCGAGCAATATCGAGATAACG 1855007 37 100.0 38 ..................................... TTAATCAACTTCTCTGCCTCCTCCTCACTCTGCACTTC 1855082 37 100.0 37 ..................................... TGAAGGAAGAGCTGCTGCAGAAGATGAAAAAAGCAAA 1855156 37 100.0 35 ..................................... AAGACAACACACTGTGGATTGTGAAAGGAGAAATA 1855228 37 100.0 37 ..................................... TGAATCGTCAATCCAGCCGCTTCGGCTGCAGCTCCCT 1855302 37 100.0 38 ..................................... ACGTCGGCGTGGTCACGGAGGTTAGAGAGATAAACGAC 1855377 37 100.0 38 ..................................... CATGATTTGAGCAAATGACGCATCAGGTGGTAAAGCTC 1855452 37 100.0 39 ..................................... AAAAGACTATCCGACGCATTTGGTGAACCTAAACCACCA 1855528 37 100.0 37 ..................................... ATAGAGGGCGGATATTTGCGCATTAAGATATGGGAAG 1855602 37 100.0 38 ..................................... TCTAATTCGCTGATTTGGCCGCTTTCGAACATTCCGCA 1855677 37 100.0 32 ..................................... ACTTTTCGAGGTCTTCAAGCGTCGGCATCTTA 1855746 37 100.0 38 ..................................... ACAAGATAGAGCAGCTGGTGAACTTCTACGCCGAGAGA 1855821 37 100.0 37 ..................................... TGAAGAGTTAGAAAAGGCTGGTTTTCCAACAAACTTC 1855895 37 100.0 39 ..................................... GCACCACTTCGTCGGCTGAGTGAACGAGCCAGCTCCAGA 1855971 37 100.0 38 ..................................... CCCTCGAAGCGGGCCTGCTGCTTGAACCTTACGGTTGT 1856046 37 100.0 39 ..................................... ACTGCAGGGGTGTGGACACAAGTGGACCGCAACAGAGGT 1856122 37 100.0 40 ..................................... CAAGTCTTCGATTTCGCCTGCGACTTGTTCAACATCCTCT 1856199 37 83.8 0 .......T..A..T.................C.TG.. | ========== ====== ====== ====== ===================================== ========================================= ================== 92 37 99.8 38 GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Left flank : ATGAGGTACATGGGGAGCTTAACATTGTAGTAGGGCTTGAGCGGAGGAGAATGCCAGTTCCACCCTCTGAGCTCCTCAGGAACGGGATTCTGCCTGATTCTTGGCCTTAGCTCAAGGGTGAGAAACTTATGCTCCAGCTCGTTAAGAAAGTAAACCATGAATTAATTAGGCATAGCCATACTTATAGTTTTCCACACGATACAAAGGAAGTGATGCCCGAATAGTTTAAGATTTAAACTAATTATTTTTTGATTGTCAAGAAAGTCCAAAATGAATGGAGGGATTTCGTGAGTTTTGATAGAGAATGGAAAGTTTTGGGTGGTGAAAAATTGTGGGTTAGTTTTAAGAATTGGCTGTTGGGTTAACGAAGCTATCCTATTCCGCAAACTGCTCCGGCATCCCTTTATAAATACAGTGTTAGTTTTGAGGTATGCTGCAATGGGCGGGAGAAGGGGGCAGTTAACTTTAAATATTAGGTGAATGGAGGGATTTTAGGGAGG # Right flank : GAACTTCATAAAACAGCACCATTCCATGTATCCTAAATAGTAAATGCTACACGGGCTACCGGAAAGGCGTTTTGAGCGGTTGTGGTGAGAATTCTGCATCACACCTGTAAAAACTTCAACAGCGGGCAGTGCTGTGCCCTAACTGAAAATACATGAAGTTTAAAATTATCAGGAAAGCCGCCGGCGGGATTTGAACCCGCGACCTGGTGATTACAAGTCACCCGCTCTGCCAGCTGAGCCACGGCGGCAGCATGGGGTGATTGAGGCGAAGAGTTAATTAATTTTACTCCACGGTGCTCCTCTCGAATGAGACCATCGCCACGTACAGCATCAACGCTGTGAGTGACAGAAGTATCAGCAGGCTTTGGTCTAAGGGGAAAATCCCGCTGACTCCCGTAAGCAGAACTCTCGAAGATTCTACGGCGTACGTTAGAGGATTTAGGAGAGCCAAGACCTTCATCCAGGCGGGCATGAAGGCGATGGGGTAAATCGCCCCACTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAAGAAAGGGAGGCTCCTGAAAATGGAGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.20,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //