Array 1 147705-152140 **** Predicted by CRISPRDetect 2.4 *** >NZ_FOUZ01000001.1 Algoriella xinjiangensis strain XJ109, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 147705 47 100.0 30 ............................................... GGTAAATTTAGATATATTTTTTATAATATC 147782 47 100.0 30 ............................................... GCCCAAACGCCGTTTTTAAATATTGTTCTT 147859 47 100.0 30 ............................................... AGTATTCATTAAAAGCATACGGATTATGAA 147936 47 100.0 30 ............................................... ATTCCTACATTACCACTCCATCCGCTACCT 148013 47 100.0 30 ............................................... ACCAACTTTTTTTACTTCGTGTTGGTTGTA 148090 47 100.0 30 ............................................... TGATTGATCTAGCAAAAGTGGACGAAATCT 148167 47 100.0 30 ............................................... CGAAATAGCGTGTGAAAAAGAAGTTTGGAA 148244 47 100.0 30 ............................................... CAGAAGCATACGCTGGAGGAAATCCAAAAA 148321 47 100.0 30 ............................................... ATGAAACTGCAGCTAAAACAATGCGAGAAG 148398 47 100.0 30 ............................................... CAGAAGCATACGCTGGAGGAAATCCAAAAA 148475 47 100.0 30 ............................................... AAAGGCTCATCAACCTTATTCATACGCAAG 148552 47 100.0 30 ............................................... CGATTGTTGTAACTTCTAAATCACTTGTTG 148629 47 100.0 30 ............................................... GCACATTGGTTTAGCTTTGGCGTCGGAGTT 148706 47 100.0 30 ............................................... TTAGATCAAGACGTTTATTCTGCTTCTGTT 148783 47 100.0 30 ............................................... GCATTAGGGTTAGAAGGTGCTAAAATAACA 148860 47 100.0 30 ............................................... GCAATACCAGCCGTTATACTTCCTTGACCT 148937 47 100.0 30 ............................................... AATGGACAACTCCTCAAGAAAATCAAATAC 149014 47 100.0 30 ............................................... TAAGGGTTTTATGTTATTTAAATGGAAAAG 149091 47 100.0 30 ............................................... GAAATATTATCGTCATTACTTCCATAGTGC 149168 47 100.0 30 ............................................... ATTAAATCGTTATAAAAATCAACAATTGGT 149245 47 100.0 30 ............................................... AGGATATGGAGTGCCGAGAAATTAGAATTA 149322 47 100.0 30 ............................................... TATATGATATTCCTAAAGAATTATTTGATA 149399 47 100.0 30 ............................................... AACCAAGCGAATCATTTGAAAATGAAGCAA 149476 47 100.0 30 ............................................... AACACGTTAACTGCTCTTCCTTAGACAATA 149553 47 100.0 30 ............................................... ATAAATTACTCACTAAATTACCAACCATAC 149630 47 100.0 30 ............................................... ACCAATTGAAACAGATAAGGAAACCATTGA 149707 47 100.0 30 ............................................... AATTTAATCTAATTTAAATTTATAATTTAA 149784 47 100.0 30 ............................................... TAGAATTAAAATACATTAAACGTCTTGAAG 149861 47 100.0 30 ............................................... GTAATGGATAAAATTATACAAACCGCTTAT 149938 47 100.0 30 ............................................... TCGTAAATATATTGTGTTAAGTATGCTTGA 150015 47 100.0 30 ............................................... TGTATATAGCCTCCGACCAGCTTAATTGCA 150092 47 100.0 30 ............................................... AACTGCAAAACGTTTAAGTTGTGACATAAA 150169 47 100.0 30 ............................................... AAACACAAGTACCTACAGGTATTACTTTTC 150246 47 100.0 30 ............................................... ACGGGGTTATGGATAATAACGTTGAAGATG 150323 47 100.0 30 ............................................... AATGTTATAGTACAATTATTTTTTTCTCCT 150400 47 100.0 30 ............................................... CAGCCAGATGGAGCTATATTCCAAGCGTGG 150477 47 100.0 30 ............................................... TACTTATAATTAATATCCGTAGCTAATTGT 150554 47 100.0 30 ............................................... ACTGCGATTTGATCTGCTGTATCATCTTTT 150631 47 100.0 30 ............................................... TGGGAGCAACCCGAAAATGAATGTGCGAAT 150708 47 100.0 30 ............................................... TATTTGCTTTTTCGTAAGTGTCTTTTTTAG 150785 47 100.0 30 ............................................... TATTTTTAAGCTGGTCCATTAAGTAATTAT 150862 47 100.0 30 ............................................... TAAAGATGCTTCTATAATTATGCTTTGGAA 150939 47 100.0 30 ............................................... GAGGAATAACAATTGTAGGAATACCACCTA 151016 47 100.0 30 ............................................... CAGGATTGCTAGTAAAAGCTATCTCGTCAA 151093 47 100.0 30 ............................................... TAAGATTAACGTAACTGCTGTGTCACCTAT 151170 47 100.0 30 ............................................... CGGAGGTTTTGAAAGATGTAGAGTGATTGA 151247 47 100.0 30 ............................................... GGCTCTGAGAACGCTTATTTTAGATATCGT 151324 47 100.0 30 ............................................... TCAACTTGTCGAGAATATAAAATAGATTCA 151401 47 100.0 30 ............................................... AATAAATCGTGTTCTTTGTCAGCATATAGT 151478 47 100.0 30 ............................................... ACCCGAATACTGCTTATAAGCTTGCATTAA 151555 47 100.0 30 ............................................... TAGTGTTGTTTTCTTTAATTAACCTATCAA 151632 47 100.0 30 ............................................... AACCAATAATCATGTTCTTTTTTTGAAGCT 151709 47 100.0 30 ............................................... TGCGTGATGTATCTGATTACTATAAGCCTA 151786 47 100.0 30 ............................................... CACATTGAAAGGTGAAAGAAAAATCATTCA 151863 47 100.0 30 ............................................... CCATTTACATAGTTAAATGAATATATTATT 151940 47 100.0 30 ............................................... TATTTACCCATTGGATTAGAGGCTCTATAG 152017 47 100.0 30 ............................................... ACTATTCAGCAAAAAGATTATTACAAGTCT 152094 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 58 47 100.0 30 GTTGAAAGAACTTCGGTAAAAATACCAAATTGAAAGGAATTCACAAC # Left flank : GTATAAGTGTATGACAGGAGAACATCGCGTAATTCGGTATCCAGAATTGGTATGAGTTTTTCGCGATACAATGCATATCGAATTATGTGGGTATTAGTATTATTTGATTTACCAACCGAAACAAAAAAACAAAGGAGCCAAGCTTCTCGTTTTCGAAAAGATTTAATAGATGATGGATTTACAATGTTTCAGTTTTCCATTTATTTACGTCATTGTCCAAGTAAAGAAAATGCAGAAGTACATATTCGACGTGCTAAAAATTTTTTGCCCGAATTTGGAAAAGTAGGAATTATTTGCATTACCGATAAACAATTTGGTCAAATGGAAATATTTTTTTCTAAAAAACAAACCGATTTACCTGCTGGTCCACAACAATTAGAACTTTTTTAATAGAAATGAAAAAAATCCTATGTTTTTATAATTACATAGGATTTTTTATTGTTTTTTTAATTCTATTCAACCTCTGTAATCCACTCCTAGAGCGGAGAAATTAAATTGAG # Right flank : CTGTAAATAGCTTCTCCAGTTAAAGGAGTTGGTTGAAAGAACTTCGGTAAAATTGTACCAAACCAAGTTCTTTCAAATCCAATTGCATTTGACTTTAATCAATTTGACAATGATGATGTTGCTATTCAAAATTTGAAGATTTGAAATTTGTAATTAAAATTAAGAAAATAGTATATACTGACGAATCTATTTTTAGAGTAAATAATATTTTTAAAATTTAGTCTAAAAAAATTAGTACAAAAAGAACCCTCAATTAAGTAAATTGAGGGTTTTATTTTACCAACTGATAAATCGTCAAAAGTGAAACAACACTTGTAACTCCGCCAATAACATAATTAATATTTTTTAAAATAAATGAATTGTCTTTAGATTTATTGTTAAAAAAACGTAAGTACAAATAAAACATAATAAGCGAGCCAATAACAACGCCTAAAGTGAAAATAGAGCTGTTAGGATTTCCGAATACAATAACGTTATAAGAAACCAATGTTGCGCTTAAA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAAAGAACTTCGGTAAAAATACCAAATTGAAAGGAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-3.00,-6.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA //