Array 1 1379908-1380178 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083641.1 Enterobacter bugandensis strain FDAARGOS_1497 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1379908 28 100.0 32 ............................ GCCGGAACAACACCCACGCGCGATCCACAGCC 1379968 28 100.0 32 ............................ AAGACTCTCCATCGCTTGCTGTATTTTTGGGT 1380028 28 100.0 33 ............................ TCCACGATATACGTAAGGGTATTGAACATAAGA 1380089 28 100.0 33 ............................ ACGACGGCCAGGAGAGAAAGTGCAATTCCTGCA 1380150 28 89.3 0 .....................A.GC... | C [1380176] ========== ====== ====== ====== ============================ ================================= ================== 5 28 97.9 33 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : TTCACGGTTTGCATAAGCTGTTTGGTGGCGTGGGCTTTATCAGCGGCATGCTGGTAGAGAAAGGGCTACCGGGATTTATTGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCACCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCATGGCTGATGGTGGGAATGGGTGAAACGTTCGCGCTCGATAAGGTTGGGGCATGGGCGATTGAAAGTCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGGTTTGCGTTAGGGAAAGCGCCTGCGTGGCAATAAAGCTGGGTGCTAAAAATATAAGGGTCTCTGGACCCTTTTTTATTGGTGGTTTTTAAGTGTTTGATTTTATTAAGCGGAATTATTTGTGATGAAAAAAGGGTTTAAAGGGTATTTTTTAGGGGAATTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : ACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGCTTATGCGAGGACCAGATCCCCCTGCGGGTGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATATTCCCCGGAAACCACTTTCGTTTTACAGCAGCCGCACACGCCCGCACGGCAGGCCGCGACTACCGGCACCTTGTTGCTTTCCAGCGCTTCCAGCAGCGTGGTGCCCACGCGGCCAAAGAAGGTCTGTGCGGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAGCGGGTCACGCCAAGCGCTCTAACTTCTTTCTCCACGATATCCATGTACGGCGCCGGGCCGCAGGTCATCACGGTACGGTTCGCAATGTCCGGCACGCTTTGCAGCAG # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1396912-1397421 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP083641.1 Enterobacter bugandensis strain FDAARGOS_1497 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1396912 28 100.0 32 ............................ GCATTGAATTCACGCCCACCAGCCCCGGCGTT 1396972 28 100.0 32 ............................ GAAAGCAGCAGCAGCATCGGTATCTGGATCAC 1397032 28 100.0 32 ............................ ATTGCGTTTACGGCGGTATCAGACAGGCCGAA 1397092 28 96.4 33 ............T............... AGTGCGTAAGCCTGTTGCTCTGTAATGCCGAAT 1397153 28 100.0 32 ............................ AGATTGAGCCAGATAGCGACCATCCTAAGTGT 1397213 28 100.0 32 ............................ AGATTGAGCCAGATAGCGACCATCCTAAGTGT 1397273 28 100.0 32 ............................ GCCTCCTGCGTCGCCGCCTGACTGATACCAAT 1397333 28 100.0 33 ............................ GCTGAGATTGCCAGCAGTTTTGGAAGTGTTCGC 1397394 28 96.4 0 .......................T.... | ========== ====== ====== ====== ============================ ================================= ================== 9 28 99.2 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTATGCCGTTGCCTCGGGGCATATCTGGAAGAGGTTAAAACCGGCCTCACGGAATCCATGCGTGATTTTCAGATAGTGGAATTTGAGGACGAGGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGTGACTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCATCTTACAGGACTGCTCCATGACATCACGCATTCTATGGCCGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGGGGTAGGCTCCTGAGGCCACTGGCTAGACCCTTTTTTTTGATGATAATGTAAAGTATTGATTTATATGATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCGGGAAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGGGGTTTCCTTTCA # Right flank : AGCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTGTCCCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTCGTCTATTTAAAAACGAAATACCATCATCCACACGCTTTCCATTTGCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTGTAAAAATAATACTTTTAAAAAATAATGTGTTTTTGTTTAGTTATCACAGAAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAATATCTTGAAATAAAAGCCGTTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCTAAACGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTGAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAAT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //