Array 1 1184-1944 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOCX01000215.1 Escherichia coli strain 879916 S15_L001_R1_001_paired_trimmed_contig_215, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1184 29 96.6 32 .A........................... AAATATCCAGGGCTGGGCTGGAGGCAGACGGC 1245 29 96.6 32 .A........................... CCCGTCACCGACGCGCAGTGGCGCTACCGTGA 1306 29 100.0 32 ............................. CCTACGAACAATTCCTCTGAACCGCCCGCACT 1367 29 100.0 32 ............................. GGATCTAACGCGCTGTAAAAATTCCGTGCTTT 1428 29 100.0 32 ............................. CTAACGCCACATTGGCGGAATTGGCTGCTGAT 1489 29 96.6 32 ............................A TGCGGATTACCGGCAAAACATGGGAGCAAACC 1550 29 100.0 32 ............................. CCGAACGGCTGGCGAAGCAGGTGGCTGGCGTA 1611 29 100.0 32 ............................. GTTTACCGCCCCGCAGAGGCGCTGGCAGATCC 1672 29 100.0 32 ............................. GGATGACCTGTCGCTAAAACTCGCCGCGTACA 1733 29 100.0 32 ............................. TCCGTTTGGTCCACCAAATGTTTGATGCTTCA 1794 29 100.0 32 ............................. TTCAGGGTGTGATTCCGCATACCAAGCAGTAA 1855 29 96.6 32 .A........................... GGCGCACTGGATGCGATGATGGATATCACTTA 1916 28 72.4 0 .AA........C..T....A..-.C...C | T [1935] ========== ====== ====== ====== ============================= ================================ ================== 13 29 96.8 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGGATGAACTACTGGCAACGCTGACCGATGATAAACCGCGAGTCATTGCACTGCAGCCGATTAGCCAAAAGGATGATGCCACACGTTTGTGCATTGAAACCTGCATTGCGCGTAATTGGCGTTTGTCGATGCAAACACATAAATATCTAAATATTGCCTGATTAAACATTTATAAGCGTTATAAATGGGTGGAACCTGTAAAGACTTCTACTCATTTATATTGTTTGTCGCCTCTGAAAACTCCTCCATTTTACCCATCCAGGGCTAATCATTAGCATTCTCTACAAATTCTGTGGCATTAATTTTTCGCTGGAGTGAAAATTATTGCGGTAAAGTTTGGTAGATTTTAATTTGTATAGAGTTATTTTAAATATTTACCTTTTTAATCAATGAATAAAGTACTCTTTAACATAATGGATGTGTTGTTTGTGTGATACTGTAAAGTTGGTAGATTGTGACTGGCTTAAAAAATCATTAATTAATAATAGGTTATGTTTACA # Right flank : CAGCTCCCATTTTCAAACCCATCAAGACGCCTTCGCCAACTCCTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCCAGTCTTACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCAGTGCCTTTCGGATAATTTTTATTCAAACCCGGATTGGTCGTTGCGGCTATTCCGTGACTGCGTGCAATTGCCAGCGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACAATTAAGTTATCGAGATTAATCACCAGCAGCGTATTTTTCTTTTCGGTGTCACTCATCCGCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //