Array 1 1669-6104 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJYJ01000031.1 Chryseobacterium hagamense strain NBRC 105253 sequence031, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 1669 47 91.5 30 A..C...............C..........................T GGGTTCAAATCCCGTATTCTCCACAGAGCA 1746 47 95.7 30 ...............................C.T............. ATGAGGGCGGTAATATGCCGCCCTATTCTC 1823 47 100.0 30 ............................................... CGTGGTAACCCGGCTCCTTAATCTCTTCCA 1900 47 100.0 30 ............................................... TTAAAAACGTACGGGAAGTACACCTTCCTG 1977 47 100.0 30 ............................................... AATGTTGACGAACCGGGAGTAAACATCCGC 2054 47 95.7 30 ...............................C.T............. TTCTTTTAATTTCGTTTATACCTTGAATTC 2131 47 95.7 30 ...............................C.T............. AGGCAGCCGGGAAAGCAACGACGTACGCAC 2208 47 95.7 30 ...............................C.T............. TTTCCTGATGGTGTGTGAGCATCTGAGGCA 2285 47 100.0 30 ............................................... TCATGCTGCCAAGCCCTTTTGTGAAGCGTT 2362 47 100.0 30 ............................................... CAATGACCCAAACGCTATCTACGATGATAT 2439 47 100.0 30 ............................................... CTCCTGTTGTACTGCCTGTATCCTTTCGTT 2516 47 100.0 30 ............................................... GCGACTCTTTTGAAGGCGTACTTAAGTGTA 2593 47 100.0 30 ............................................... CCACCTGTCATAAAGTTCTCGAATTTAGTT 2670 47 100.0 30 ............................................... TTTTTGAACATATAAACGAACCACCCATAC 2747 47 100.0 30 ............................................... TACGCTTCTTAACTAATTGATAGACGGTTA 2824 47 100.0 30 ............................................... GACGCGAGGGACTTAATCTCATTCCGGTTT 2901 47 100.0 30 ............................................... ACCTTCACCATATTGTAATCCACCAACACT 2978 47 100.0 30 ............................................... ATCATCCATGATGTAGAACTCTCTTTCGAC 3055 47 100.0 30 ............................................... ATATAACGTCAAAGGTGATGAGATCAGAAT 3132 47 100.0 30 ............................................... TTTAAGGATAAAGTCAAACAGTCTTTCAGA 3209 47 100.0 30 ............................................... GTAGGGAAAAGGGCGGCCGCTAAATCGGCA 3286 47 100.0 30 ............................................... CCATTCGGCGAGCTCGTCGTCATCGTCCAA 3363 47 100.0 30 ............................................... TTCGATGCACGAATGGCCGCTAACCGATGC 3440 47 100.0 30 ............................................... TTCAAAGCCTTAAATTGCTCATCTTTCATG 3517 47 100.0 30 ............................................... TCACCACCTTTTTGAAATGGCACATTCTGA 3594 47 100.0 30 ............................................... CTAAACCGGTCAAGAACGGTTTTTAAATGT 3671 47 100.0 30 ............................................... CCAAAAGTTCTTTTTTCATCCGTATTCCGT 3748 47 100.0 30 ............................................... TAAATCAAAATTCGGCTTTGAACCGATCAA 3825 47 100.0 30 ............................................... AATTTGACGTTATCTTCGGAGTCTGATCGA 3902 47 100.0 30 ............................................... TTGATGATTCAAAGATACAAACACTTTTCT 3979 47 100.0 30 ............................................... TCGCAACCAATAATCAACGCCTTTAATGCT 4056 47 100.0 30 ............................................... CCAGGGCCGCAATGGCTAGAATAATCAATC 4133 47 100.0 30 ............................................... CTTCCCGCTTAACCCCCTCGATGAAAGCGA 4210 47 100.0 30 ............................................... AAAGGGAGAAATAAAAATCGCTCGTCATAT 4287 47 100.0 30 ............................................... CGTTAGCGATAAAAGACGTTTTTGTCATAT 4364 47 100.0 30 ............................................... GTATGATCGCGAATTATTACGCTGGGACAA 4441 47 100.0 30 ............................................... TATTACGATAAAAGGCAAATCCGATTCTTT 4518 47 100.0 30 ............................................... ATACGGAAGGTAGTGCAGGGGATCTGTACT 4595 47 100.0 30 ............................................... AAGTTTGCTCACAATAAAGACAAGACCGGA 4672 47 100.0 30 ............................................... TGACCTGATCCACATACGGAGAACATTCTT 4749 47 100.0 30 ............................................... GTCATAATTTGCCTCCCGGCCTAAACTAAT 4826 47 100.0 30 ............................................... TTTTGTTGTTCCGAATTATTAAATCCGTTG 4903 47 100.0 30 ............................................... TTCACCGTAACAGGCCGTTTCCGCCTCATA 4980 47 100.0 30 ............................................... TGAGCAATTGCAAAGCCGGCCTGCTCCGAA 5057 47 100.0 30 ............................................... CGACATGGAAAACATTATACAAAGAATAAA 5134 47 100.0 30 ............................................... AAATCTGTAAAGTAACATCCGAGATCCTGG 5211 47 100.0 30 ............................................... TGGGTTTTCGGGTCATAATCGAATTCACTG 5288 47 100.0 30 ............................................... TCGCCTTCCTGGATACCAACATATTTTCCG 5365 47 100.0 30 ............................................... ATCATTTAGTTTTGCAGCAAGAACAGAAGT 5442 47 100.0 30 ............................................... TTTATGGTTTTATGTCAGTCAGTCAGTCAG 5519 47 100.0 30 ............................................... ATGGTTTATTTATGGTTATTATGGTTATTA 5596 47 100.0 30 ............................................... TATGGTCAGTCAGTATATGGTTATGTCAGT 5673 47 100.0 30 ............................................... TTATGGTCAGTCAGTCAGTCAGTATTTATA 5750 47 100.0 30 ............................................... TATTTATGGTTTATGGTATGGTATTTATGT 5827 47 100.0 30 ............................................... TTATGGTATTTATGGTCAGTATATTATTTA 5904 47 100.0 30 ............................................... TGTGCCGTTTTGTGGCTGATTGGTTTCGTA 5981 47 100.0 30 ............................................... TAACGATCTTAACGCACTTTTAGCATTTTT 6058 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 58 47 99.6 30 GTTGTGAATTGCTTTCATTTAATCGTATCTTTGGGATACAACACAAC # Left flank : CTATACCCGGATCCGGAACAGTTCATTGACGGGCACCCTACAGTACTCGGACGGCAAGAATGCGATTAATGTTCCTCCCCTGAAAATGAAGGATTACATTTCCCAGCTCTTCGTTCAGCATGTGGATCTTTACCGCGGGGTGTCATTCGATCCTGCCGTTCCCGGCCTGATTCTCTCCCGGCCTCTTCCGCCACCGCCGGCCTCGGATCTCATCCCGGGCATCCGTGAGGTCACCCGCGACGAACTGGTCGAGACCACCTGCGCCCAGATCATCAGCTGGATCGCCTCCCGCGCCCTGGCCGCTGCAGAACCGCTGGCGAAAGTTTAAAAATAGAAACAGATTTACCAAATAAAAACCACCTGCCGGATGCGGCGGGTGGTTTTTGTTTAGCATATAGGAATTGGCAGACCTGCTGGTCTTGAACACCGGTTCTTTAATCATATCAATCGTTTTGATCCGGGTAAATTCTTACCGCTTCCCGTATCCCATTCTTTTTAAA # Right flank : CCTCAACATTTAACCCACTGAAATGCAGTGGGTTTATTTGTTATTTAGGATTAAAAAAATCAGAAGAGTTCGAGCTGCTGGAAGGTTGGAGGCGGTTCTTCTTTATTCCTGGCAAAGAAGATCTCAATATCGCCGAACTGTTTGTCCGTGATGCACATGATAGCGACTTTCCCGGCTTTGGGAAGCATACATTTGACGCGCTTGATATGCACTTCCGCATTTTCACGGCTCGGGCAGTGGCGCACATACATGGAAAACTGGAACAGCGTAAAGCCGTCATCGATCAGCGATTTCCGGAAACGGTTAGCGTCCTTCATATTGGCTTTCGTTTCGGTCGGGAGGTCATACAATACAATTACCCACATAATCCGGTATGCGTTAAACCTTTCGGCGTCCATATTTTTATTTGTAAAATGTACAACAATGTAAGAAGTAATTCAATTCATCAGATCAGTTCAGGATAAGAGATCAGCCGTTTTTCACCGGTATAGCATTTGTAA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCATTTAATCGTATCTTTGGGATACAACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.96%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCATTTTTCCGTATCTTTGAGATACAACACAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //