Array 1 4911806-4912733 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032257.1 Pseudomonas aeruginosa strain AR_0111 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 4911806 28 100.0 32 ............................ GCGAAGAAAAAGCCCGCCAGATAGGCCAGGAA 4911866 28 100.0 32 ............................ TGGACGCGGGCGTCCTGGCTGATCAGGCTCCA 4911926 28 100.0 32 ............................ CAGCGGGATCAGCGACCAGCCGATGGCCCGCA 4911986 28 100.0 32 ............................ GTCGAGGCTGTCCAGCCGCAGCACGCTGCCGC 4912046 28 100.0 32 ............................ ATGCCGCCGACCTGGTGCTGGTCGACACGGTG 4912106 28 100.0 32 ............................ TTGACGACCAGCCAGAACCTGCGGCCGTTGGC 4912166 28 100.0 32 ............................ GAGGAGTCCGAAGACTTGTCCGTGTCGTACCA 4912226 28 100.0 32 ............................ AGGAACGTCCCGTCTCAGTTTGGAACGCCCAC 4912286 28 100.0 32 ............................ TCGCGGCCCTCGGTCTGCCAGCGGAAGCCATG 4912346 28 100.0 32 ............................ TTCATCAGGATGCCGCCAAGGGTCCGCATAAT 4912406 28 100.0 32 ............................ ATGAAGGCCAGCAGGCCGAACACGATTGCGAT 4912466 28 100.0 32 ............................ TCGAGCAGCGGCCCGAGGAGTCCGAAGACTTG 4912526 28 100.0 32 ............................ TGGAGAAAAGCAATGCGAGTGGTGCGAGGCCA 4912586 28 96.4 32 ....................T....... AGACAATCCGGACCTGCCGCCCAGGACGATCT 4912646 28 100.0 32 ............................ TGCAGCGACTGCACCTTGGCTTGCTGCCGGTC 4912706 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 16 28 99.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCCATCACAAGACCTTTCGCGCCCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCTCCAATTGCCCGAAACTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATGCACGAAGTGAGGCTTGCCCTCCGAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGGCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGACCAAGGCAGGCACAAAGAACAGCTTGACCACCAAACATGACGCCCGCTCAAGCGCTAAGCAACAGCGTCCCCCCTCACTGCCGTGTAGCTAAGAAGTCGCGAGCGATATAGTCCCGTAGGGCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 6574989-6576393 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032257.1 Pseudomonas aeruginosa strain AR_0111 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6574989 28 100.0 32 ............................ AGTGGGCCGAAATCGGCCGATGAGTTCATCGG 6575049 28 100.0 32 ............................ GCCCAGGACGATCTACTACTACGGCATCCCGG 6575109 28 100.0 32 ............................ TGTCGCAGATCGATCGCGAGGACGCCGATGGC 6575169 28 100.0 32 ............................ AGCAGCAGATCATCGACAACGCCCGCGCTTCT 6575229 28 100.0 32 ............................ GAGAACGATTCCGTCTTGTTGGAGCTTTCTGT 6575289 28 100.0 32 ............................ CGACGAGCAACTGCGCTTGCGCGTGCGTAACC 6575349 28 100.0 32 ............................ GGAAGGCTGGCGCTCGAACGGATGTGTACAGG 6575409 28 100.0 32 ............................ TCCGGATCACCAGGGCGACAGATGGCCACCTC 6575469 28 100.0 33 ............................ CTCTGGCGGTAACCTTCCATGATCTGCGCAGCC 6575530 28 100.0 32 ............................ TGCATGCACATCGGCGAACTGCTGACGTGCTT 6575590 28 100.0 32 ............................ TGGCGCCGCCCGATTTCACGTAGCTGCTCGAT 6575650 28 100.0 32 ............................ TGATATCCAGCTGCTCCAGGAACCACTGGCGG 6575710 28 100.0 32 ............................ TGATTTCGAAGGCCGCGGGCGACTGATCCGGA 6575770 28 100.0 32 ............................ TGGATCAAAGAACGCATTCTCGGCACGTCGAA 6575830 28 100.0 32 ............................ TCCTTGCCGGGCGCGGCGGCGAGCAGTTCGCG 6575890 28 100.0 28 ............................ GAGTGTGAGGCCGGGCAAACGGATTTGT 6575946 28 100.0 32 ............................ TTGACGGCCAATGCCGGCTTCGACTTAGCTCG 6576006 28 100.0 32 ............................ AGCCACTCGCGGGCCAGCTCGGGCGATAGCAC 6576066 28 100.0 32 ............................ GTGTCGCCCAGCACCGTTCAGCGCTACTTCAT 6576126 28 100.0 32 ............................ TCGATCCACACCCGCGAGGACGTGGCCACCGT 6576186 28 100.0 32 ............................ AGCAATGGAAAGCAGCGATGTGACCCGACCCG 6576246 28 100.0 32 ............................ TGCAGGTCATAGGCGTATTCGAAGGACAGGCT 6576306 28 96.4 32 ........................A... TGTCCCGAAGTTCATAAGCGGGCTTAGGGCGA 6576366 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 24 28 98.8 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : CGAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTGGGGTGGATTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGTTGCAAAAAGAGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTTGGAAGGTTGATGGTTTTTTGGTCTA # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGGGCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCGCCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGTTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCGCCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGCTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [48.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 6586568-6584919 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP032257.1 Pseudomonas aeruginosa strain AR_0111 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 6586567 28 100.0 32 ............................ TGGCTGATCAGGCTCCAGAACGGATCGTAGAC 6586507 28 100.0 32 ............................ TTGATATGCCGGTAGAACGTCGGGCGAGACAT 6586447 28 100.0 32 ............................ TCGAACGCTGCTGAGCGCCGAACGCATAGATG 6586387 28 100.0 32 ............................ AGACCGAGGACGGCTCGAAAACTCGGATGATC 6586327 28 100.0 32 ............................ TTCGACGGCCACGCCTCAGCCCGGCCCAGGCC 6586267 28 100.0 32 ............................ TTATTGAAATCCTCAGCGGCCTGCACTTGCTC 6586207 28 100.0 32 ............................ TGATCACCCAAGCGTGCGTATCGCGGCCATCC 6586147 28 100.0 32 ............................ TGATCACCCAAGCGTGCGTATCGCGGCCATCC 6586087 28 100.0 32 ............................ TGGGTGTCCAACATCGACGGGTCGAACTGCTC 6586027 28 100.0 32 ............................ TGCGTAGATGCCGCGATCATAGCGCGCCCTAC 6585967 28 100.0 32 ............................ TTCGGTACTTCTGAACCATACGTCGCCGCATA 6585907 28 100.0 32 ............................ AGTCATCGATGAACGACGAGCCGGTCAGTGCC 6585847 28 100.0 32 ............................ AGAAGCTGGAGCGACGGCTGGCGGCAATTCGT 6585787 28 100.0 32 ............................ CCGGACGTTCACGCTGGTGGTGAGACCATCCG 6585727 28 100.0 32 ............................ TGGCTGTCGCTGCGCTGCTGGCCGCTGTGTAT 6585667 28 100.0 32 ............................ GGCTGGTCCCAGAGCGGGTCGACGGCACGGTC 6585607 28 100.0 32 ............................ GAACCGCGCGTTCATTGCTGAAGGCCATCGTC 6585547 28 100.0 33 ............................ ACATCAGCGCCGCGGTAGCCGATGCCGATATCT 6585486 28 100.0 32 ............................ ACCATCCCCGGCCACGGGTTGCCCGACACCTG 6585426 28 96.4 32 ........T................... GTTCCATCCGGGTAGGTCACGTCCACGTCGTA 6585366 28 100.0 32 ............................ TGGAGAGTGACCCGCTCAAGACCGAGGCCGAG 6585306 28 100.0 32 ............................ TGATGCCGGACATGGGACGTTTCGCGGGAACC 6585246 28 100.0 32 ............................ CCGGACGCCCCTAATCTGGAGGGCTCCTGGCA 6585186 28 100.0 32 ............................ TTTCCCCGCGAGGCATAGCAGGGATATCTTGT 6585126 28 100.0 32 ............................ TACAAGCAGATCGGCGAGCTGAGCGGCAAGGA 6585066 28 100.0 32 ............................ TCGTACTGGTCGAGATTTCCGATTCGGAAGCC 6585006 28 100.0 32 ............................ TTCGACGCCGCTAGGGTTGCCGCATCGCCGTC 6584946 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.9 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGTCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCGCTCCCAAACATCCGAATATAAAAGTTCCTACCCCGCCCGCCCGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACATTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAGCATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGGGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACGGGTACCTCCATTACTCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //