Array 1 8806-9818 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE340328.1 Campylobacter ureolyticus ACS-301-V-Sch3b acmbC-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 8806 30 100.0 34 .............................. AAAAAACAAATGCACTTTTATCATCTCCAAAAAC 8870 30 100.0 37 .............................. GACAATAATACTGAATTATATCAAAAAATCTATGAAA 8937 30 100.0 36 .............................. TTTTTTCATTCTTACTTTCTACCTTAGTTTTTATCT 9003 30 100.0 36 .............................. TCATTTTCATCAAAATCGCTAAAATAAATTTCTCTT 9069 30 100.0 36 .............................. TTTTTTCATTCTTACTTTCTACCTTAGTTTTTATCT 9135 30 100.0 36 .............................. TCATTTTCATCAAAATCGCTAAAATAAATTTCTCTT 9201 30 100.0 37 .............................. GTTGTGTAGTTGCGATATAAGGTTGGTATAAAACTAC 9268 30 100.0 34 .............................. CTTGTTGTAGGTTGTTCCATATTTACACCATTAG 9332 30 100.0 36 .............................. AAAAGATTTGATTTTCCTAATGACGGTTTTATTTCA 9398 30 100.0 34 .............................. TTTTGATGATGATGATGAAAAAGAATACTATAAA 9462 30 100.0 37 .............................. TAAGGAATAGCAATGAATCTAACTAGCGAACAACTAA 9529 30 100.0 34 .............................. GCAAAAAAACGGCTATCGCCTTGAAGAAGAAAGG 9593 30 100.0 35 .............................. GTTATAAAGTTTGATAAAAATTATAGCTAAGAATT 9658 30 100.0 36 .............................. AAGACATTCCTACATCAGTTGATAAAACTCCTCAAA 9724 30 96.7 35 .............T................ TTAAAAGCTTAAATCCATCATTTGACAGTTTTGAA 9789 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 16 30 99.8 36 GTATAAATTTGATCCTATGGATTTTGAAAC # Left flank : CTAAATAAAAAAGAAATAACACCAAAAGATTTTAAAACAAATGCTGGACGGATTCGTTTTAGCAACGACGCAGTACAAAAAATAGAGTTAAATATGATAAAGTCTTTAACCTCTGTTGTAAGTCTTGGCAAACAAAACCTTACATATAGGCAAATCATAAGGCGTGAGGCAAACAGGATAAAAAAGTGTATTTGTGAAAATTATCCTTATGAGGGCTTTGTGGGTGAGATTTAAGCGGTTTGGTTGATTTATATATTGAAACAGCAGCCTAAATTATAAGTTTGTGAGCTAAGCTCAAAGGTTTGAGCTATTTTTATATTTTGTGAAAAATTTATTTTAATGCCTCTTAGTGAAAAGTTATTTTAAAGTAAAAATTAAGTTTTCTAAAACTTAGATATAGCTTTATTTCAAGTTTTTATTTTTATAAATTCAGCGATTTTAAAGGAAAATAATTTATAATTTTACAGCAACAACCGCTTTTATATGGAGGTTTGGTTGCT # Right flank : CTACGGCACTGGCTATTTTTGAAATATCATCTCTTTGTATAAATTTGATCCTATGGATTTTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 2 14142-14955 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE340328.1 Campylobacter ureolyticus ACS-301-V-Sch3b acmbC-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 14142 30 100.0 36 .............................. AGATTATAGCTCTCAGTGAAATCAAAACTATCCCAA 14208 30 100.0 35 .............................. AATATAGAAGTGGAATACCTATTTTAAAAGATATT 14273 30 100.0 34 .............................. TAACTATTGATAACAGTGGAAAAGTTGTTAATAA 14337 30 100.0 35 .............................. TTAGATATAATATACTAATATTTACAAAGTTTTAA 14402 30 96.7 35 ..........A................... CTACATTCTTGTTTCATAAGATAAACAATGCTTTT 14467 30 100.0 35 .............................. TCATCAAAAGGCAAGTAGTTTTCTTTCCAGCTCAA 14532 30 100.0 34 .............................. TTTTCTTTGATAATATCTTCAAAACGCATATTTG 14596 30 100.0 38 .............................. AGCTATCATTGTCTTTAAACATCACAAGATATCCTTTT 14664 30 100.0 36 .............................. CCAGTAAGTGGATTGTTTGTATCTAGTCCAGATAAT 14730 30 100.0 36 .............................. TAGAACTTACTCAAACGAACATAAATTTTTAACAGG 14796 30 100.0 34 .............................. AATTTGCAGTTAATGTTGGGATTAAAAGAGCTCT 14860 30 100.0 36 .............................. CATAATGATGCTTTGTGTTGAAAACATGGCAGACGC 14926 30 96.7 0 ..........A................... | ========== ====== ====== ====== ============================== ====================================== ================== 13 30 99.5 35 GTATAAATTTGATCCTATGGATTTTGAAAC # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CGTAAATCTAGGAAATTCTCTTAGAGAATATTTAAAAATATTCAAAACACCTTTTATAGACAAGGAACAAAAATATCTAAATTCTACAACTTATGAGTGGCAAGATGATAATAATGTGAGATTTCGTTGTATTGTAGATCACATTGAAGAGAAGTGTATAAGAGGGGAGGACCACAACTGTCACTACCCCCCTCTCGTGATACAATTATAACATTTTACTTTGATAGAAATCTTAATGAAAAAATGATATTTAAAAATTCTAAAGTTGAAGAATATTATTCAAATTTAGATATTGAGAGTATTAAAAAAGATTTAGAGAACATTAAATCTTTAAGCAACGACTTTAATAATATTTTTTCAAATTCAGATGATGATAAGACTACACAAGAAGATGTATAAATTTGATCCTATGGATTTTGAAACACTAAAGAGGTTTTAAGTAAAAATAAAGCAGGGATAGTATAAATTTGATCCTATGGATTTTGAAACATAATTAAATA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 3 16775-17066 **** Predicted by CRISPRDetect 2.4 *** >NZ_KE340328.1 Campylobacter ureolyticus ACS-301-V-Sch3b acmbC-supercont1.3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 16775 30 100.0 35 .............................. CAGGGTTATTAAAATCATCATTGTAAAAGTTTGTA 16840 30 100.0 34 .............................. AAAAAATACAAGAGAAGCGAGGAAGAACGAGAAG 16904 30 100.0 36 .............................. AAAAATCACGTGTTGAAGTGCAAAATAATCAAACTG 16970 30 100.0 37 .............................. TTGCTTCTAAGATCTGTGAATAAATTTCATCATTAGC 17037 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 5 30 100.0 36 GTATAAATTTGATCCTATGGATTTTGAAAC # Left flank : ACCAAGAACTCCGCCAGCTGTTTGAGCCAACCTTCTATTTTCGCTATTATCAACAGCTATTTTTGCAGGTGATACCTGTATTATTTGAACATTTTGAGCATTTTGCTCTTGGTTGAGCTGTGAGGCATCATAAATATTTCCACCAACTGGATTTGATGTTGTTGAGCAACCACTCACAAATATTGCACCAATTATGCTAGCTGAAATAATATATCTTTTCATAAAAAATCCTTTATATATAAATTTTTTCTTTATTATATAAAAATAGAAGCAATTATCATTTAATATTTTATAAATGCTATTAAATTCGCCTATTTTAAACAAATAAAGCTAAAATTAACTGCTTTTTGATAAAATATCATAATTTTAATATAAAGAAAAAATATGGAAAATGAAGAGATAAAGACTTATTTAAACAATTTAAAACAAAAAACCCCTTTGATTCATTGCATAACAAATTATGTAACAGTAACTAGAGGTGGAGAAACTTATGATTTTTT # Right flank : CAGATTATAGCTCTCAGTGAAATCAAAACTATCCCAAGTATAAATTTGATCCTATGGATTTTGAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAATATGGAAAATGAAGAGATAAAGACTTATTTAAACAATTTAAAACAAAAAACCCCTTTGATTCATTGCATAACAAATTATGTAACAGTAAATGATGTCGCAAATTCACTAATCGCAATTGGTGCAAGTCCTGTTATGGCTGATGAGCCAAGCGAAAGTGGTGAAATAACTGCTATTTCAAATGGACTTTTAATAAATTTAGGAACTTTAAATTTAAATACTATAAAAGCTATGCAAAACTCTATAAAAATGGCAAATTCTCTAAATTTGCCAGTAGTTTTGGATCCTGTTGGGGTTGGAGCAAGCACTCTTAGAAACGAAACTGCCATA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATAAATTTGATCCTATGGATTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //