Array 1 2384-3707 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP033063.1 Synechococcus elongatus UTEX 3055 plasmid unnamed2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 2384 36 100.0 35 .................................... TTACCGGGTCAAGGTTTGGCGCTGGTGGATTTCCA 2455 36 100.0 37 .................................... AGAGACATCTGGGAAGAGAACGGCTGGGACAAAAAAT 2528 36 100.0 35 .................................... GAGAGAGACTTGCTAGAGATTGCAGATAATCTCTA 2599 36 100.0 36 .................................... AGAGGCGGGCCACCAGGGAGGCCAGGAAGGTTAGGG 2671 36 100.0 34 .................................... GCATTCAAGCTAGGAAAAGGCCCCCGCGTCTCAG 2741 36 100.0 35 .................................... CTCAAGACTTGGGCAGTGGATATCGGTGGCCTTTC 2812 36 100.0 37 .................................... GCAAACACAGGCCGTGGCCCTCGCGTGACAGTCCAGT 2885 36 100.0 35 .................................... ACTCAACTTCTCAGTCAAACCCCTACTTTATAGGA 2956 36 100.0 36 .................................... GGGAAGATGACATCGACATTGACGAGTTTGTCAGCC 3028 36 100.0 37 .................................... GAACCCCTAGGACTGCGGTTTAAGCTTCTCAAGTCTC 3101 36 100.0 34 .................................... TTCCAGGCGGTTTGTGCGGCAAGACCGGTGAGAT 3171 36 100.0 35 .................................... TAGCCCTGCATCAGTTCCTCACCCGCAGCTAGGCC 3242 36 100.0 35 .................................... TTATAGAAATGGTAGGCAAATCCTGCCCAAGCTAA 3313 36 100.0 36 .................................... ACTCTCAAGACACGAGGGCCTCCTTATGGAGTTGCT 3385 36 100.0 35 .................................... TTGTTGGGGTCTTTGGGCTTGTGCAGCCCGATCGT 3456 36 100.0 35 .................................... ACGGAATCGCAACTATTCGGTACTAATCGCCGGTG 3527 36 100.0 36 .................................... CCCCAGAAAAGAACACAGGGGGTCGCTCTCCCTCTG 3599 36 100.0 37 .................................... CGCTCAATACCGGCTGCGGTTTGCGGGAAAAACTCAC 3672 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 19 36 100.0 36 GTGTAATTACCCTTGATGCCATTAGGCGTTGATCAC # Left flank : TCGAGACTCTAAACGTTGGCGAAAAGCCTATAAACTACTGCAGGGTTATGGGGAAACAGTCCAGTACTCAATCTTTCGTTGTTGGCTGAGTCAAATTGAGCGAGAACGACTCCGTTGGCAGCTTGAACAAGTCCTCACTCTCGAAGATAGTCTTTTGCTGATTGGAATTTGTGGACGCTGTATTGAGCGGATCCCGAATTACAACCGCCCAGAGGCTTGGAGTCGGGCTGGAGAATCTTTTCGGATTCTCTAGGCATGGATCTCTGCGTGTTGCAGCATCAGAGCTTCCGTAGTCTCTAGAAGGCTTGTGGATACTGGCTTTTAGCTGATTTGGAGATGCCAGAGATGCTTGCGAAAGCCCAAAACACTGTCTCTGTCAAAGGTTTGGGGCAGAATAAGGCAGAGGAGCTGGCGCTAAATGTTGATTTTTGGGCTGTCATGGAGAGGTGCTTGCAAAAACTTCTAGCAGCCCATACGGTGACAGCATTACAGGAATCGCC # Right flank : CATTTATCGGGGTCCCCTCAGAAAACGGAAAAAATCGTACGCTAAGCCGAGATCAAAGTCTGCCTGACTAACCGAGGAAGCATAAGTAAGCCCCGCTTTCTCAAAACTGGTGGTTTGTGCAATCCCGCTTCTGACGTAGGGTGGGCTGGCATTTACGGGGCCTTGCGATTCTCGAAAACTATTCTTGAAACCGTTCTCGAAATCTCTCACTGCCTCGATGAGTTTTAAGAATATTGAGGCGCTGCCTCTCCAAGCTTGTAAGAGCGGCTAGGGGGCGTTCCAATGCTGATTGGCTATGCCCGTGTCTCCGACCCAAGACTAAAACCTGACGTTATAGTGGCAGGCTCTCCTCTCGCCTAGGCTTGAACCTTGTCATAAAACTCTTCCGTCAGGGTGCCACGTTCGTAGTCTGGAAGCTGGACCGCTTGGGCGCAGTGTTAAACAGTTAATCGATCTGGCCGGTCAACTGAACAGTCGAGACATTCAGCTCTAAAGCCCGT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTAATTACCCTTGATGCCATTAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //