Array 1 20862-22861 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEMFH010000020.1 Vibrio cholerae strain Vc517 NODE_20_length_79057_cov_101.379375, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 20862 32 100.0 33 ................................ AGCATGGAGCTTGCTCTAGCAACCTCTCCGCTT 20927 32 100.0 34 ................................ TGAATTGAGCGCCGCCTGCTTTAATCTGAATCCA 20993 32 100.0 33 ................................ AGGAAATTAGCGTATAACAAAAACCCCTCATTT 21058 32 100.0 34 ................................ TGATTACTCATTATTCACCACCTTAAATGCTGCC 21124 32 96.9 34 A............................... AGAAGTAACCACTATCTCATTGAGCGCGGTGATT 21190 32 100.0 33 ................................ GTTTACGACGATGATGGTGACATCACCGAGCTG 21255 32 100.0 33 ................................ CTCGTGGTCGCATTAACTACCGTAATCCAGACG 21320 32 100.0 34 ................................ AAAACTGCTTCACCGTTTTTATAGAGATCAGTAC 21386 32 100.0 33 ................................ AAGATAGATTCAACAGACGGAAGACGTGCAAAG 21451 32 100.0 33 ................................ ATACTCATGCCAGTAAGAATATAAGATAAAACA 21516 32 100.0 34 ................................ ACCGTTTGGACCCTCACCAAACAGAGACTGGTGC 21582 32 100.0 33 ................................ CTGCGTAAGTGATCAGCTCTTCTACTGTTTTGC 21647 32 100.0 33 ................................ TTGTTTAAGGCTCTCGGTTATCAGGTGGACCCA 21712 32 100.0 34 ................................ CAAATTCTGCGTGAGCTGAATAAGCCCATGACGA 21778 32 100.0 34 ................................ GTCCGCTTGAAGAGGCGTTCCTGTGAGTCGCCAC 21844 32 100.0 33 ................................ TCATAGCAACTCAATCTGAAATGGCAAAAAAGC 21909 32 100.0 34 ................................ ATATTTCAGACAGCAAGCATTTGCTAACGGAATT 21975 32 100.0 33 ................................ AGATGACATTTGTCAAACCTCGTAGTTGTTACG 22040 32 100.0 34 ................................ AGAGCTGGCGGTGCAGGGTTCGGTAATCAGTTGA 22106 32 100.0 33 ................................ GGCTAACGTTTCGGAGTTCACCCGCGCTAAGGT 22171 32 100.0 33 ................................ TTTGATACAGCGGCCAATCTGCTGCGCAGTTTT 22236 32 100.0 34 ................................ CATACAATCAGGATATGCAGATCGGCGCGGATGA 22302 32 100.0 33 ................................ TGTGATCAAGTGATGCAACTACGCAGTCATTGA 22367 32 100.0 38 ................................ TATGTGGGTTCCAACAAAGAGATGGCGCGCGAGTTCAT 22437 32 100.0 33 ................................ GCTGGAGCCTTGAAATCTATGCCCATTTGTTTA 22502 32 100.0 34 ................................ TACCGAATGGCGTCAATTCAGGGTGCGTTTGACA 22568 32 96.9 34 ...............................C TAAGCATTGTTTCCATGTCTGCGTCTTTGGGTAA 22634 32 96.9 33 ...............................C TCTAGCTGCTTCGTTAAGTTGTGGGGCTTCTCC 22699 32 96.9 33 ....A........................... TAACCGCTGCAACATACGCAGCGAAACGCCAGC 22764 32 96.9 34 ...............................C TCAGCAGCGAGCGCTTCTGCCTGTTTTTTTTCAT 22830 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 31 32 99.5 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAT # Left flank : CCATTTGTGATCAAAAAATAAGGAGCGAGCCATGATGGTATTGGTCACCTACGATGTATCCTTTGCCAGTGAAGATGGTCAAAAACGCCTCAGACAATTAGCAAAGGTATGTTTAGATAATGGAGTAAGGGTGCAGTATTCTGTATTTGAATGCGACATAGATGCCGCGCAATGGCTGCGCTTTAAAAATAAGCTGCTGTCAATTTACGACCCTGAAGTAGACAGTTTGCGTTTTTATAAGCTCGGTAAAAACTGGCAAAACAAAGTAGAGCACCATGGTGCGAAAGAAGCCATAGATATATTCAGAGATACCCTAATATTATAGTCGCTAGGCTTGAGTTCTCAGTAAAATACTGGGGATCTAGCGATTGCATAAGCTCTTTAAAAATATAGGAAATAATTATCTGTATAGATTCACACAAAGTAGTTTTGTGCTACCGCGCAAAGTTAGCGGTAACCAATAGAGTGTGTTAGTTTGTACGTGCCTCTAAGAAGAGGCA # Right flank : TAAGTATTGTCACATTATTGCAGGCAATTTGTTGCCCGTGAGCAAGTTTTTGCCTCGCCAATTTTCGCGTTATCATGCGCTTAAAGCAGAATAAGCGAGGATGTCAAAGCCATGACAAAAGATATTAGTCGGTACAATATGCGTTGGGTTGAAGGGGACACTTTACCTGAAGCTCCAAAGCCTAAACTTTCTCCGAAAGAAAGGTATTTAAAGCAACTCCAAGAGAATCATCGACAATCTGAAGAAACGTGGTCTTATGTCCAAGCAAACGAAGACCGTTATGCATTACAAAGAGCGGATGTCCTTACTCGCCGAAATGCCTCACAAATGCTTGATGACTCTCTTCGTGACTCACTAAGTTCGCAGTGTTCACTTGAAGAAGAAATGGCAAAGAATCATCAACATGTTCTTATTGCAGACTTAGAAGATGCCCATAAAATCTTGCACAACATTTGGTTGGAGTCTGGTCGTGATGTTGCTGCAATTGCTGCGAGTATCAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //