Array 1 465096-468555 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022958.1 Azoarcus sp. DD4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 465096 32 100.0 37 ................................ GTGTTTCCGGACGGGGCGCTTGTCATCATCGACGAAG 465165 32 100.0 36 ................................ GACGCCGCTCGTGACGTCATTGAGCGCCACGCCGAA 465233 32 100.0 38 ................................ CCGCCGGTCATCCAGCGCGAATCAGCCGGTGACCACGC 465303 32 100.0 37 ................................ GTCGATGATGTTCGGCTCGCTGGTTTGCATGGTCGGG 465372 32 100.0 34 ................................ AGGTCAAGGACTGGTACGCGGTCGCCGACTCCAT 465438 32 100.0 34 ................................ AAGCGTACAAGCTTGAATCCGACGACAAAGGCCA 465504 32 100.0 37 ................................ AGCCTGCCGCACGCGCAGCGTGATGCAGCTCCACCCC 465573 32 100.0 35 ................................ GACCACTGGGTGAAAGAGCAGCTGCGGGTGCGCCA 465640 32 100.0 36 ................................ GCCATCAGTAGCCCCGCCCTGCGTGGTAGAGGCGCA 465708 32 100.0 36 ................................ ATCTTGGCTTGAGCGCGAGTTGCGGCCTGCTCGATC 465776 32 100.0 33 ................................ TACCTGTGCCGGTTCAACGGCTCGGCATGGGAC 465841 32 100.0 34 ................................ GCCGGCAACGCCTACAGCTGGGTGTTCGACGACG 465907 32 100.0 35 ................................ AGCTTCTGGTTGATCCACTTGTTCATCGACACTTC 465974 32 100.0 33 ................................ ATCGCCAAGGCTGGCGGGCTGTTCATCCTGCTG 466039 32 100.0 36 ................................ TACGAATACGGGTTCGAACTCGGCGACGGCTGCGGC 466107 32 100.0 36 ................................ AAGGCCATGTTCTGGCGTTCGCAGCAAGTCGGCATC 466175 32 100.0 36 ................................ GTGTTCCACTGCCGTGAATCGCTCAGGTTCGTGTGT 466243 32 100.0 35 ................................ ACCAACAACGCCGCCGAAACGGCCGAAGGCGGCGC 466310 32 100.0 36 ................................ ATGCTGCCCCCTTATGCAATCGCGGTTCCGCCGGCC 466378 32 100.0 35 ................................ TTAGAGCCGAGGTGCTGGGAAAGCACCCCTTCCTC 466445 32 100.0 35 ................................ ATGTACATGCGTCGCGCGGTGAAGTAATGGGCGCC 466512 32 100.0 33 ................................ TGTTCCACCTTGGCATCCGCGAGGCAGGCATAG 466577 32 100.0 35 ................................ GCCGCCGCTACCCGGTCGCCGTCGTGGCGCAGGTA 466644 32 100.0 34 ................................ CTCGCGGGTCGGGCGCCACCAGGCGCCCTCGCGA 466710 32 100.0 35 ................................ GCCGCCGCTACCCGGTCGCCGTCGTGGCGCAGGTA 466777 32 100.0 34 ................................ CTCGCGGGTCGGGCGCCACCAGGCGCCCTCGCGA 466843 32 100.0 35 ................................ TCCGCCAACCGCGACAGACCAGGCGCTTGGATTGG 466910 32 100.0 34 ................................ CAAGGTGGCGTGATGGACTTCCGCCGGGTCTATG 466976 32 100.0 35 ................................ TCTTTCAGGGCGAGCAAGAGCAGGACAAGGCGCTG 467043 32 100.0 36 ................................ GTGGTGCTGGCGGCGCTCGCAGTCTTCAAGCGCGCA 467111 32 100.0 34 ................................ GTTAGCAACGTGCTGACCGTGCGCATCAACGGGA 467177 32 100.0 35 ................................ CGCAGCGGCATGACCGCCGCCGAGCTCGCCATGGC 467244 32 100.0 36 ................................ CGGCATCAGGCGCGCGTGGTCGGCGTCGGGCTCGAG 467312 32 100.0 34 ................................ ACCCGCTACCTCGACTCCCCGGAACTGCTCGGCC 467378 32 100.0 34 ................................ AATTTCACGCAGCCGCACCGCCGCCTGCGGATCG 467444 32 100.0 37 ................................ ATAGCGCCACCAGGTCGGCGATGCAGATGTGCGTGCC 467513 32 100.0 35 ................................ GAGTTGTTGCCGGCGCTGTCGGCATGCACCAGATG 467580 32 100.0 37 ................................ TTTCAGGCATCAGCCGTCTCCTGCTCCCGAGACGCGG 467649 32 100.0 36 ................................ CAGCACGCGGATGGGCGCGTATTCCAGGTGGTTTTC 467717 32 100.0 36 ................................ GTGAGGTAAACACTATGGCCAGTCATGCCGAACGCT 467785 32 100.0 34 ................................ TCGACATGCCACTTGTAAGCAGCAATCGCCAAAT 467851 32 100.0 36 ................................ AGCAGCGCCTTGAACTTGGTCGCCCGCCACAGCTTG 467919 32 100.0 36 ................................ TTCGCGTGTTCGAGCGCCTTGTCGAGGTTGGCTGCC 467987 32 100.0 36 ................................ CGGCAACTGCGGTGACCACGTGAAAATACCGCCGAT 468055 32 100.0 35 ................................ GTGCCCTTGTGGCACGCCTTCAGAGTCCTGCCGTG 468122 32 100.0 34 ................................ GCTCAGATTCCACCGCCGCGGCTTGGGGGCAGCG 468188 32 100.0 35 ................................ ACGTCCTGATCCTTGATGGCTTTGCGGGCAGTCTG 468255 32 100.0 34 ................................ CAGGTCATGGGCTTCCACTGGCAGGGCCTCGGCT 468321 32 100.0 36 ................................ CGCGAGGCCACGCTGTCGCAGATCAAGCCGCAGGTC 468389 32 100.0 36 ................................ TGAGACTTCCCCCCGTGGGCGATATAGCCGCAGCCG 468457 32 100.0 35 ................................ AGGTTACAAGTTCAGACGCTGCGATCACTTCGCGG 468524 32 93.8 0 ..........................C.G... | ========== ====== ====== ====== ================================ ====================================== ================== 52 32 99.9 35 GTCGCGCCCCTCGCGGGCGCGTGGGTTGAAAC # Left flank : CGTTCCTGTGGAAGTGAGGCCGCGCGATGATGGTTCTGGTGAGCTATGACGTGAGCACACGCGAGTCCGCCGGGGAGCGCCGCCTCCGGCGCGTCGCCAAGGCTTGCCGTGACTACGGTCAGCGTGTGCAGTTCTCGGTGTTCGAGATCGAGGTTGATCCTGCCCAGTGGACGGTGCTCAAGCATCGGCTGATGGGGCTCATCGACCCAGCGCAAGACAGCCTGCGCTTCTACTATCTGGGCAAGAACTGGAAAACCAAGGTCGAGCACATCGGCGCCAAGGCCGCACTCGATCTGAATGGACCACTGGTTTTCTAAAGGCCGCTGCGAACCCCTAGCTGCGGGGAAGATACCGGGAGGTTCGCGTTTTTCTATCCGGCTGATACAGAAGCTTTTTCCTTTTGCGTCGCCCATCTCGTTGGCATTTGTCCAGGCTTTACTGAACAGGTTCGCGAAATCCGGCGGTATTTCCCTTGCCCGGCTTGGTGTTACCTTGCCGGT # Right flank : CCGGACCGACAGCAAGGGCACAGATCAAGATGGCCGCGTTGCGCCCCACGCAAGTAGGCTTAGCTGAACGGCCCAACTAACATTGACCCAAACGGGTTTCGAGTTTGCCGCGCGTCATTTCCTTTAATCCCGCAACTCCCGCCCCGTCAGCTTCAAAAACACATCCTCCAGATTCGCCGGCCGGTGCAGATACCTCAGCCCCGGTTGCGCCGCCAGGTGCGCCAGCAGCGGCGCCGGGTCGCGGACGTAGCAGAAGGCGGTTTCGCCGCTGATCTCGAAGCGGTCGGATAGCGCGGCGGCGTGTTGGGCGGCCCAGGTGGGGGCGCCGGCGGAACCGTTGCCGCCATTGCCCCACTCGCCGAACACCTCCACCACCTGCGGTTCGATGTGCGTGGCGATCACTTCGCGCGGGCTGCCGCCGGCGAGCATGCGGCCGGTGTCGAGGATGGCGAGCTGGTCGGAGAGGCGTTCGGCCTCGTCCATGAAGTGGGTGGTGAGCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCTCGCGGGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCGCCCCACGCGGGCGCGTGGGTTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-9.40,-9.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //