Array 1 42803-45147 **** Predicted by CRISPRDetect 2.4 *** >NZ_VSVQ01000004.1 Ligilactobacillus salivarius strain FHNXY73M9 Scaffold4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 42803 36 100.0 30 .................................... TAAAATCACGAAGACTGTTAAGGACGAAGC 42869 36 100.0 30 .................................... AGTCAATAATACATATTATGTTGATGTCTT 42935 36 100.0 30 .................................... GCAGAAAATGGCAACTCTAATCGTTGGGGA 43001 36 100.0 30 .................................... CCATGGACTTAGCTAAGTTCAAGGGTATCA 43067 36 100.0 30 .................................... GTAGAGTACGACCAATTTGCTCATTCTGGT 43133 36 100.0 30 .................................... GTGTTCTGTAGTGAATAACAACAAAAGTTC 43199 36 100.0 30 .................................... CATGATTATTAACAATTTATCCACAATCAT 43265 36 100.0 30 .................................... TTAACTTTAGCAAAGGAAAGATATTCCCCT 43331 36 100.0 30 .................................... TGTTCAGATGGTACTTGAATAACGTTAAGT 43397 36 100.0 30 .................................... GCGTAGAGTCAGAAAGCAAGCAGATATTGA 43463 36 100.0 30 .................................... CACTTCCACGGTGTCGGACCAATCGCGGCA 43529 36 100.0 30 .................................... AAAATTAAAAATGAATGTAAATGTCCTTGA 43595 36 100.0 30 .................................... CGATACCTTATCTGGTATTGCTTACCGTTA 43661 36 100.0 30 .................................... GCTTATGAGAGTTCAGCAGTTGATGCACCA 43727 36 97.2 30 .................................G.. AACATATCTTTCCTACCGTCTTTATATCCA 43793 36 100.0 30 .................................... TCATGCAAAATCTTGTAATAGTTTCCTGTG 43859 36 100.0 30 .................................... CATCAGCCCCACGTTCTCCAGTGTCACCTT 43925 36 100.0 30 .................................... CCATGGACAGTGTGGTTTAGCAATGGTTGT 43991 36 100.0 30 .................................... ATGTAGTACCTGATGCATTTTGTGCTTCTT 44057 36 100.0 30 .................................... GATATACATTGGATACAAGTGCTAAACCAT 44123 36 100.0 30 .................................... AGCTTGTCTGAGTTCTTCAAACATGCTCAT 44189 36 100.0 30 .................................... TTAGAAGACTATTATTACGATCTTGTTCAA 44255 36 100.0 29 .................................... CATCTGTGGTTTTAGTCGTTACTTAGTCG 44320 36 97.2 30 ..............G..................... GTAGAAGACTATTATTACGATCTTGTTCAA 44386 36 100.0 30 .................................... CATCAGTGGTTTTAGTCGTTACTTTAGTCG 44452 36 100.0 30 .................................... AGCTTATGAAAGATAGTAAAGATTTTGGAA 44518 36 100.0 30 .................................... GATTAGACAACCTAGAGGAAACGGTCAATA 44584 36 100.0 30 .................................... CATGAAGAATGATCATACAGCTAAGTATAT 44650 36 100.0 30 .................................... GATTTTTAACATGTCTATTCGTGGAATGAA 44716 36 97.2 30 .............A...................... ACGTGCAGTCTGCGGCTCGTCAAGCATCCC 44782 36 100.0 30 .................................... TCAGAATTTAAAGTACATCCTTGGACAGGA 44848 36 91.7 29 ...........................A...G.T.. ATCTGCGTTCAGTTGGTGTCTCAATGCTC C [44880] 44914 36 100.0 30 .................................... AATATGGATCAGTAAAACACGTTACTATAT 44980 36 100.0 30 .................................... GTTCAAGCAGCACAAGTTAATGAAGATTAC 45046 36 100.0 30 .................................... ACAACTGGAGTTTGAGTACGTTTAGCTTGT 45112 36 80.6 0 ..........A.........T....G.A.CG..G.. | ========== ====== ====== ====== ==================================== ============================== ================== 36 36 99.0 30 GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC # Left flank : AACAGACCGAATTAGTAAAAAGTATATGAATGTATTAATTAAGAAGATTATTGAAGACATCACAGACGATGAAAGACAAGCAATACTAAAATCAGTAAATAGTTTGTATGATCGTATTCGAGAGGTTTTGTATAAAATTGATATACCATTACAAGTAGATTATGACAATGATTTAACAAGACTATTTAAGTATTGTCAGGTACATACAGAGGCATTGCTATGGAAAAATGCGTATGATAGAATATCTTCAGATGTTAAATTGCATGTGGAACTAAATAGAGAAAGAATTATAGGTCTAACCAATGTCGCACATTATCTCACTAAAGAAGAGTTTCAGGAACTTGTAGGTCTTGTTAAGGCGACTAACGCATCAATGTTTATAATTGAATTCACAGAAAAGAATGGTCAGAGATTCTTTGAAAACTGCGATAATTACTATATTGATGAGGATTATATTGATTGGTACTAACGAATAGTTAAATTTTGATTATAAAGTAACT # Right flank : CTAAAATATAAAAAATATTTTATAATATTTATAAATCTATCAGAAATTTTCTGGTAGATTTTTTTAGTGTAAAAATTTTTGAGTTTAAGATATATTGTGGTTGATAATGTAATATTATATGATATATAATATAGTTGAAGATAAGATATAAAAGAAAGTGAGGGATGATGATGAAAATTCAAGTTAGTTCTGATTTACTAGATGGTTTAGTATTAGCGCTTTTAGATAAGCAAGATTATTATGGATACTCATTGACACAGGATATGCAAAGAGCAATTTCAATTTCAGAATCAACACTCTACCCAGTATTACGCAGGTTAAAGAATAATGGTTTATTAGAAACATATGATCAATCATATCAAGGGAGAAATCGTAGATATTATCGCATAACAAATAGTGGGGAAGAACATTTAGGAAGAGTTAAAAAAATGTGGAGTGACTATAAAGTTAGTTTGGATTCAATTTTCGAAAAAAATAGAGAGGGGGAATAATAATGAACT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGAAGTATGTTAAATCAATAAGGTTAAGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.10,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [76.7-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //