Array 1 26931-25377 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAGI01000022.1 Neisseria meningitidis strain Neisseria meningitidis isolate 22431, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26930 36 94.4 30 ........G...A....................... TCAGGGCTATCGGGGCTGACCGGTTTATTG 26864 36 100.0 30 .................................... GAGCATTGACACTATTTGTATGGCGTTAAG 26798 36 100.0 30 .................................... AGCATTTGGGCGGCACGGGCAAAGCCGTCA 26732 36 100.0 30 .................................... TCCATGTGAACTCGTTGGCGCGTTCGATGA 26666 36 100.0 30 .................................... TAAACCTCTGTCGGTTGGTTTGCTTAGATT 26600 36 100.0 30 .................................... CGAATTGGAAAAGTTGCCCTACCGGTGGGG 26534 36 100.0 30 .................................... GTCGCATGGTAAAATAACCACCGCTTTACA 26468 36 100.0 30 .................................... AAACTAAAACTTTGGAAAGTTGGAAAGTTG 26402 36 100.0 30 .................................... CGGCGCATCCCCTTTAATTTAATATCACTT 26336 36 97.2 30 ............A....................... ATAGAACCTATGGCTGCTACGGCGTTGACA 26270 36 97.2 30 ............A....................... TTTTGTGGAGTTTTGTTATGAGTGAGGGCA 26204 36 100.0 30 .................................... AAGCATTGACGATATTTGTGTGGCGTTGCA 26138 36 100.0 30 .................................... AAACGCCGGTAGGTTTCGTCTGTCTCCATA 26072 36 100.0 30 .................................... CTGCAAGCATTTTCATCATCGGCTGTCGTA 26006 36 100.0 30 .................................... GGAAGAGCGGCATCTGAATGCGGAAGAAGA 25940 36 100.0 30 .................................... CATCAAATCATCCGCCGCGATTCGATCGCA 25874 36 100.0 30 .................................... ATGATGCCGAAACCCTGCAAGCCCTGAATA 25808 36 100.0 30 .................................... GCCTGATGCCGTGTCGTGCGACACCTGAGA 25742 36 100.0 30 .................................... TGCGGAAAGCCTCCATGCTTTGCAGCACTG 25676 36 100.0 30 .................................... AATTTGCGCCTTGCTGCATTGTGTAGTTTG 25610 36 100.0 30 .................................... TTCTTCCCGATTGAGGTTGCTAGTTTTGTC 25544 36 100.0 30 .................................... AGTCAATGAATCACTAAAAGCCAAGTCAGA 25478 36 100.0 30 .................................... TAAATTTTTGATTTTGATTTTTCCTTTACA 25412 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.5 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGCCGGAAGAAGGTGCTCATGAGAAATCTCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGATTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //