Array 1 447267-454983 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072633.1 Chloracidobacterium thermophilum strain B chromosome 2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 447267 36 100.0 35 .................................... TGAAAAAGACGAACACTCCGGAGGACGGGAAGCCT 447338 36 100.0 39 .................................... AAAGTAAAAGCTTACGTTCCAACCCTGGAGTACACGCGG 447413 36 100.0 39 .................................... TGAAAGGTTTTGTGCCGGGGTGTGCCCGTTTTCCGGCGG 447488 36 100.0 37 .................................... CTTCTGCGCCGGGATTGAGCACGCCGTCCACATCACT 447561 36 100.0 38 .................................... CTCCCGCCATTCACTTCCACTTGCACCGATTGCCGCCA 447635 36 100.0 34 .................................... GACTGCACAACCGACAACGCAAACTGCTTGAACG 447705 36 100.0 35 .................................... CGGCGTCAGGACGACTTCACGCTGGGCGTGCGCGA 447776 36 100.0 34 .................................... CTCTCAGCGCCCACCATCGTTGATTACACCCGCA 447846 36 100.0 37 .................................... GCGATAATGACGGCGATCAGCGGGAACGGCATCAGAT 447919 36 100.0 37 .................................... TCGTAGTGATTGCCGGCCATCTCGTAGACGGCTTTCA 447992 36 100.0 35 .................................... TGTGGCTATAGTACACGTGCGCATTGAGCTTGACA 448063 36 100.0 38 .................................... TCCATTACGTTTATCGCGTGCCGCAATCCCGTCAAGCC 448137 36 100.0 38 .................................... AACCACGCTTCGCCGCGCATATCGGTAAGCGTCGGCGC 448211 36 100.0 34 .................................... AGCTTGCGGCGTTGCGTTACTCGTACCAGCGGGG 448281 36 100.0 34 .................................... GCAATCAGCGGGAAAGGCATCAGATTATCCCCCC 448351 36 100.0 34 .................................... CAGGGGTTGCCCTTGTGTTGCACAAACCAGTCGT 448421 36 100.0 39 .................................... GCAGGCTTACCGCCGCCCAACTCTGTCAAGTGCTTGAAC 448496 36 100.0 35 .................................... CCTTGCCGTCTCCCCTTTATTCCTGCCTTGCCAGG 448567 36 100.0 34 .................................... TTCGGCGCACGCTGAAGGTCTGTCCCCCAGACGA 448637 36 100.0 35 .................................... CGGTTTTTGTGAATTCGACGGTTGGCGGCTGAAAG 448708 36 100.0 35 .................................... GCCAAGCCGGCGCAGGGAAAACGTCGCTCATCCCG 448779 36 100.0 35 .................................... TTAGGAAACCGCACCAAGACGCGAACAAGCCCGGC 448850 36 100.0 38 .................................... ACAATGGCGATCAAGGGAAACGGCATTAGATTACCCCT 448924 36 100.0 35 .................................... ACCACGTCGCCGGGCCACGTGATACCAAATAAGCA 448995 36 100.0 36 .................................... TACGCGCGGCGTTGCGCGTCATTCAAATGCGACAGA 449067 36 100.0 36 .................................... ACGGCCTTGATTTCGTCTTCGATATTCCGGCGTCGA 449139 36 100.0 39 .................................... ATACCGCTCCGCCGGAATTGTGGTTGGAGCTGGACGGCA 449214 36 100.0 36 .................................... CAGACGAGTGGCAGATACAGCTACCGTCTGCCCTTT 449286 36 100.0 35 .................................... TCAATCAGGAAAAACCAGCCACGCACCGTCGCGGC 449357 36 100.0 37 .................................... TACCAGCCGGACTTGTCACGCTTTTCGCCCGTATTGT 449430 36 100.0 34 .................................... GCGCTTGTTACGCCGTATTGGGCAAGGAATCGAG 449500 36 100.0 36 .................................... TTTGGGAAGCGGGTGGTGGGATTACCCGTCATTCTG 449572 36 100.0 34 .................................... GTTCGCTCTTATTACTTCAGCGGCAAGTACTACG 449642 36 100.0 38 .................................... TCCACGATGGGCCGGTAGTCCAGTCGCGCGCACTCTTG 449716 36 100.0 38 .................................... ACCATGTACACAAAGTACACACCGGATAACCTAACCCA 449790 36 100.0 34 .................................... GTGGTATTGCCGCCTGCTGCACGACTGGGCATGG 449860 36 100.0 37 .................................... CCCTTTTTGTGGCGCCTTGAAGCCGATCTTGTTCTTT 449933 36 100.0 37 .................................... GCAAATCTGGACGCAACTTTGATTGGCGCTGCGCCGG 450006 36 100.0 35 .................................... AAGCGGCACGGGAGAAACCAGGAACTCGCCAGTAT 450077 36 100.0 35 .................................... TGGTGCTCCGCCTGACGCGGTATCTCACGGCTGTC 450148 36 100.0 34 .................................... AACGTTTTGTCAAGGGGAAAGTTCCGATTTTTTT 450218 36 100.0 35 .................................... GCCGGCAATCACTACGACATCTGGGTTGGGTACGT 450289 36 100.0 35 .................................... GCTGGCTGGCGTGGGCTGTGCAAGGGGAACTTTTG 450360 36 100.0 35 .................................... TCCACGATTGGTCGGTAGTTCACTCGCATGCACTC 450431 36 100.0 36 .................................... TTGTCGACCGCCGGGAAAGCAGCCGGCGGAGTGTCG 450503 36 100.0 36 .................................... GTGGCAGGCGCGGTTTCTGAAGGCCCTACCCGCTAT 450575 36 100.0 35 .................................... GTGTGGGTTTGAGATTCGCAACCGGGCCTTCAAAG 450646 36 100.0 37 .................................... CGCACCTGAGGAAGTGGATAGAACGACTGTCGAAAGA 450719 36 100.0 34 .................................... GACTCGTTACTTGACGAGTCCACGCCAGATTAAG 450789 36 100.0 37 .................................... CGCTGAACTACGTTTTGGCTAAGGTCAATCAACTGGG 450862 36 100.0 36 .................................... AAAAACTCAAGCTCTTGCGCAAGCGCATGGGCGGCA 450934 36 100.0 35 .................................... GATTTCGCCTATGCGAAGACGCTTGCGCGGAGATA 451005 36 100.0 39 .................................... AAGAAGCCCAAGCGCAGGCGCGGATTATTGACCTGACCA 451080 36 100.0 35 .................................... GCGGTAATCGTGATTATAACGCCTGAAGCGCGGGG 451151 36 100.0 35 .................................... CGGACAAGTGGCAGATACAGCTACCGTCCGCCTTT 451222 36 100.0 34 .................................... ACCGCGCCGGTTTTTCCGTTTGAGCCAAACTGGG 451292 36 100.0 36 .................................... CCCGTCGCTGGTCAAGGAGCGGGTCAAGGGGCGTCC 451364 36 100.0 35 .................................... ACGGCGTGCACTGGGTACTTTGCTTTCCCGTCGAA 451435 36 100.0 34 .................................... ACCGGGTCTGACCCATATATTGCATCACGAGTGC 451505 36 100.0 35 .................................... TGTTCTCAACCGAAATCACCGTATCCGACGGGTTG 451576 36 100.0 36 .................................... ACGGTTGGCTTCAACATGGCGTTTCAATCCTGGGTG 451648 36 100.0 36 .................................... GACGCGGTGATTCGTGAGGCAATCAAAGACAGGATT 451720 36 100.0 36 .................................... CACGCTGCCGTTGCTGCTGGCGGGCTGGACAAGCTG 451792 36 100.0 38 .................................... GGCCGCTATCTGCACCTGCAGGGGAAGGTGTATTACGC 451866 36 100.0 34 .................................... CGGTGTGCTATGCAGTGTGGGGCTGGCGTCCACG 451936 36 100.0 34 .................................... TACGGGAGACGGCGCAGAAGCTCCCCTAAAGCGT 452006 36 100.0 37 .................................... TCACACGCTTCTACGCGAATTCACAGACCGGGAATGG 452079 36 100.0 36 .................................... ACCGGCGAGAGACCGTTTCTATCCTGCCTTGGGATA 452151 36 97.2 38 ...........................A........ ATTTCAGCCGAGCGACCGCCGCTTGGATTTGTTCACGA 452225 36 100.0 38 .................................... GCCATCGCAGTCAAGAGCACTCGCTCGCTCTCGCAACA 452299 36 100.0 38 .................................... TTATCACAGCGCGCCTCGACCGCAAAGTTGACGCAAAG 452373 36 100.0 34 .................................... CTGTCACACGTGCTGGGAGTACACACCAGAGGGG 452443 36 100.0 36 .................................... TGGTTTCTCCTTTCCCGCATAAAACGGCTTCGAGTG 452515 36 100.0 36 .................................... CGATTGCGTCAGCGTCACGCACCTTGTCTTTGACAG 452587 36 100.0 38 .................................... GCGAACTCGTCTTGGTGCGTGTCGTTATCCGGGAGACA 452661 36 100.0 36 .................................... TTGACCGGAGACTGCTGCGAACCAACCTTGTTGGCG 452733 36 100.0 36 .................................... ATCTCTGGGTCGGATACGTCCGACCCAACACAGCCG 452805 36 100.0 34 .................................... GCAGTTGCACCGCCGCCGAGAAAACTTGCGGCTT 452875 36 100.0 36 .................................... ATCGCCTCGGTGTCGTTGGCGGCAATCTTGATTACG 452947 36 100.0 34 .................................... TTGATATTGGCCCACTGTTCGGGAGTCAGTTTGG 453017 36 100.0 37 .................................... GAAATCACCGCTTACGTACCAACCGAGGAAGCTTGGA 453090 36 100.0 36 .................................... ACTGTCATCCTGCTTGCTAGCGAGCTTGCCGAGCTA 453162 36 100.0 35 .................................... TACGCCTGGCGCGCGTCTTTAGTGTTCCGCTTTTC 453233 36 100.0 35 .................................... ATCAGCGTCGTCCAATCCAAAGCGCGCCGGGAAAA 453304 36 100.0 35 .................................... GCAATGATGACCGCGATCAACGGAAACGGCATCAG 453375 36 100.0 38 .................................... GCGGGACTTTAGCCGCCCACACGTAAAAGTCGGACGGC 453449 36 100.0 37 .................................... CACACCATAGTACTGCTTCCACGCAAGAGCGCGTCGG 453522 36 100.0 37 .................................... AGCAGGCTGTAGTGTTTTCCATCCAGTCTTGCGACTG 453595 36 100.0 34 .................................... ATCGCCCCTAAGTCTGGCGGCTCCCAAGTGTCCA 453665 36 100.0 37 .................................... TAGACTTTTGCGAGTTTCAGCGACATAAGGCGGGTCA 453738 36 100.0 35 .................................... AATCGCTGCTCGCACGGGTGCTTTTACTGTTTCGC 453809 36 100.0 36 .................................... CTTCAGTTAGAGGCCCTTCAAGACTTGCTCAATCAG 453881 36 100.0 34 .................................... GGCCGCATCCTGTACTCGCCGTCAATGCCGGGCC 453951 36 100.0 36 .................................... GACGGCGGCCAAGATCAGTCCGAAACACGCCGTCGG 454023 36 100.0 35 .................................... GCCCATGAGGTTTCGTTTCTTTTTTCGATCTGCGA 454094 36 100.0 34 .................................... CTCCCTTTTTTTCTGCTTGTAGAGAAGGCGCCTA 454164 36 100.0 35 .................................... TCAACGAAACCCGTAAAACCCTGAACGCCTACGCA 454235 36 100.0 34 .................................... AGACGGGACTGACTACGGCTTACCCAGCCTGGTT 454305 36 100.0 36 .................................... CTTGCCAAACTTCTACCGCTACTTCCAGCGCATAAG 454377 36 100.0 36 .................................... GCCAGCCGGTAAGAATCAAGCTGGTCTAGTTCTAAC 454449 36 100.0 36 .................................... TCCGACAAGCCAATTGGCGCGGTCAAACGCAGGTCA 454521 36 100.0 34 .................................... GCCGGGCGGGGGCTACGCCCGAAATCTCACACCG 454591 36 100.0 35 .................................... ATACCAAGTATAATAGACTTCTGTGCGAAGTTGTA 454662 36 100.0 35 .................................... TGCTGACGGTTGTGGACGACAGCGAGGATGATTCG 454733 36 100.0 36 .................................... CACCCGTCACGCGGGTGCGAGTGCCGGAAGGCACTG 454805 36 100.0 36 .................................... TTTGATTCGGTCTCAATCGAGCACGAACGCGCGTTT 454877 36 100.0 35 .................................... CGGCCGAAATACCGGCCATATTTCCGCGCTGGCTT 454948 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 108 36 100.0 36 GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCAC # Left flank : GTACGCGATCCAAAGCGGTGGCGCAAAGTTTATGAGCGCGTCAAGGGGAATGCGGAAAGGGTACAATTTTCCGTCTTCCGCATGTATTGCACCAAAACTGACCTTGAGCAGTTGCGTTTTGATTTGGCAAAGCTGATGACGAGTGAAGATGATTTACTGGTCATTCATTTGTGTCCCGGCTGCGCAAGGCGTGTGGTTGACACCTCAACCAAAACTTCCTGGGATGAAGAACGCAAGCGGATTGAAATCCTGTAGGCGGGCGGATTCACGCATGTCGGTGTGGACAGGATGCTTTGCCGGTGAGTGTCTGGTAAGTCCTTTGAAGCGAACGCTTTTCCTGCCTGAATGTGGGGAAGACTTGCTTGAATGGGCCAGCGTGCTTTATTTTGCAGGAGTTACGGGCATTACCCGGCAGACGGGAGGCGGCTTGCCGCCTTTCCGGTTCAGGTGCTTGAGCAAGAAGCAGTTTTATGTGGCCAGTGCTTACCGTTTGGGGCGCG # Right flank : CTTAAAACCGGCGAATGGCGAATGGTAGATGTATGAAACTCTCTGATGCTGAGAAATGTTGATCACCCACAAGGCGTTGTCAGGCAAAAGCAATCTTGAGAGATTGCTTTTGCCTGACAACACCACATCGCCAAACAAATTGACCGACCAGCAGTTCCCCTCCCCTGTCCCTAACCGGCGAAACCCGGCGGGCCAGGCAATCCACCAGTACCGCAGCGTGCTGGACAGGACAAGAACAACCGGTAGATTATTCAATGCCACCATCACACGCCCCGCCACCCCGGCCCTCATCGCACCACCCAACGTATGCCCCGCTGGCTGTTCTGCCTCATCATCCTGCTGTGCAACACCCCCGGAGCCTACGCCCTCGACCCAAACAAAGTCCTGACGCAATACGTCCGCCAAGTCTGGCTCGCCAGTGACGGACTCCCCCTCAACGCCATCTTCACCATCACGCAAACCCGCGACGGCTACATCTGGGTCGGCACCCACGAAGGTCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCAAAAATCTTTGATGCCGAAAGGCGTTGATCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 2 491711-491227 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072633.1 Chloracidobacterium thermophilum strain B chromosome 2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ================================================ ================== 491710 31 100.0 45 ............................... GAATTAAAGTGGACATTCAGCGACTTCATTTACCTTGACAGCCCG 491634 31 100.0 42 ............................... AAAGGCAGTCGGTGGTTGGTTATCTGAAACTGTATCCGCATC 491561 31 100.0 46 ............................... AAAGGTTACTTGACAGGGCGTATAGAATAGTGTAGAAACGAATTAC 491484 31 100.0 48 ............................... GAATTAAAGGGAGAGGCCATCAGAGACAGGATTTTAGCGGCTGTGCCC 491405 31 100.0 41 ............................... AAAGGAACTCCGTTCACGGTTGGCCTTCTCCGCTCCCTCTG 491333 31 100.0 45 ............................... AAAGGACGAGTTCAAGCGCGGCACGCTGCGTGCCCTGACCAACGC 491257 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ================================================ ================== 7 31 100.0 45 GTCATGGGTCTTGAAAAAGACCCCTTGAATT # Left flank : CGATGTCGTGGTGTACGAAGACTTGCAGGTGAAGAACCTGGTCAAAAATCATCATCTTGCCAAATCCATTCATGATGCTGGCTGGTCTCAATTCACTGCGTGGCTGGACTACTACGGCAAGGTGTGGGACAAGGCAGTCGTCAGCGTACCGCCGCAGTACACCACACAGGACTGTAGTAACTGTGGGCGTATGGTAGTAAAAACCCTGGCCACCAGAACCCATAGTTGTCCTCAATGTGGATTTGAATCAGACAGAGACCGGAATGCGGCTTTGAACATCCTCAAGAAGGGACTAAGCATCTTGGGAATGGAGTGGCAAAACAGTACCTTTGGGCAAAAGGGAACTGCCTCGAAAGAGGGAACGCTTGGGGAGAGATGCACCGCTGCTTTGGAGGGGCAACCTGATGAAGTAAGTGCGCTCGCAGAACCAAGAACAAGAATCCCCTGCCTTTAGGCAGGGGAGTATGTCAAGTGAAATTGAAACCGCCCTCGCGGCCGGA # Right flank : AAAGTCCGCCTGATGTTCGGCTGGGTTTGGGCCGGGGACCTGGTGCGTGTGGTCGTGACGACCGGCAAAAAGGCAGGCAACTACCTGGGTCGTGTCGCCATTCGAGCCAGCGGCAGTTTCAACATCCAGTCCGCAACCGGGCTGGTACAAGGCATCCATCACCGATGTTGCACACTGCTCCAGCGTGCAGACGGGTATGGATATTCGTGGACAATGAAATCAGGTCTGGCACAGACCTTACCGGTTACGCAGGACGAGCGATACGCACCGCTCTCGCTGCCATCGGTAGCGATCTGAGCGTACAACCAACGGACTGAAGCTCCGCGCGCCGCGAAGGGCAGGCGGAGCGGCGTCAGGTACGAGCGCGTGTCGGCCGGCAGCTTTGCCGTGGAGATTTTCTGGGGTTGCGAACCCTGGCTCATCAGGTTTGCTCCCTGTCCTTTTCTCGAACCCGATGAATACCGTCAGCCCTTCGCCGCTGCTGAATAAGCGTGGCTGAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCATGGGTCTTGAAAAAGACCCCTTGAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.70,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [35.0-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 3 1024531-1028204 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP072633.1 Chloracidobacterium thermophilum strain B chromosome 2, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 1024531 36 100.0 36 .................................... ATCGCTGCCACAGCCCTGCTCCATCTGGCGGAAGCC 1024603 36 100.0 35 .................................... TTTCCCATGAGGCGGTGCGCTGGGTGCTCTGCTTC 1024674 36 100.0 38 .................................... ACGGAGCGGTTTGCCGCTTTGTTGCCGCCCGAGGTGCC 1024748 36 100.0 37 .................................... CTCCGGGTCGCCGGACCACGTCCACGCATACAGCAGG 1024821 36 100.0 37 .................................... CCAGGCGGCGGAGTAGGCGCTCCAGCGCCGCCCAAAG 1024894 36 100.0 36 .................................... TCAACGATACTGAAGCGGTCGTCCAGCACGAAAAGG 1024966 36 100.0 37 .................................... GGCAAACGGGTGAACAGGCTGCTTGAAGTGATGCCGC 1025039 36 100.0 37 .................................... TCAGTCGTTGGCGCGCCGTCAAGAGCTTCCAGTACGC 1025112 36 100.0 37 .................................... TGGCGCGTAGTTTCCCACCTAGCGTCCATCAGCGCCT 1025185 36 100.0 38 .................................... CTTGACGCGAACGTTTTGCTCGGGCGGCTGATTGGCCA 1025259 36 100.0 36 .................................... ATTCTTACCGGCTGGCCTTCTTGGTCTACCCATACC 1025331 36 100.0 37 .................................... CCCTTGACGGTGGAGGCTACGGGCGGGCTGCTCGCAC 1025404 36 100.0 37 .................................... GCAACCGCGTGACGGGACGCTGCGTAGCGATCACCGT 1025477 36 100.0 36 .................................... ACTGCACAACCGACATCGCGAACTGCTTGAACGCTT 1025549 36 100.0 37 .................................... ATTGACTGGAACAGCGACGAAAACGCCTTCTTTGACG 1025622 36 100.0 35 .................................... GCGCCTGCGCGCCTATCTGTGCCCGGCGGGTGTCT 1025693 36 100.0 38 .................................... ATTGACTGGAACAGCGACGAAAACGCCTTCTTTGACGC 1025767 36 100.0 36 .................................... GCCCGGTTGCGGCAAATGCGCCGTATATCGTTGGCG 1025839 36 100.0 37 .................................... ATCCCGACGTTGCCCGCGCCGATTGTTTTGTCAGCGG 1025912 36 100.0 37 .................................... GGGACTTCTGGTTTCACAGGTGGGTTCTTGCTGATCA 1025985 36 100.0 35 .................................... TCCCAGCGCCAGTCTCTGGCGCGAACCAGCGCCAG 1026056 36 100.0 38 .................................... TGCAAGGACGCTTTGACGCAATGGCCGGAGACAAGAAT 1026130 36 100.0 36 .................................... GCTAGCGAACTGGCGGGGTAGCCCCTACGGGCTATA 1026202 36 100.0 35 .................................... AACAGCGGGAGCATCTTTTCAGACGCTGGCAATCC 1026273 36 97.2 38 ...................G................ AGACAGTCTCCGCTGGTGGCTGAAATGTCCTGGGAGTA 1026347 36 100.0 38 .................................... CCGGCTCCGGGACGCCACAGGGTTCTCCGGCAACCGGC 1026421 36 100.0 36 .................................... TACGAAGAGCGTGACGGCAAGTTTGTCCTGCCGGTG 1026493 36 100.0 37 .................................... GTGACCGGCGGCGCGCCGGACGGCTGGATGGTGATGG 1026566 36 100.0 35 .................................... ATCCGCAAGGTGGCAGAAGAAGTTGGCGTCTAACC 1026637 36 100.0 37 .................................... CGCAAGCCGACACGACAAGTGCCGGGCTGCTGATTCC 1026710 36 100.0 35 .................................... GGTTACGTCCCCGCTCCTACCAGCGGTCAGGTTAC 1026781 36 100.0 37 .................................... GGGATTTCGGCGAGGGAAAGATTGACAGTACGCACGG 1026854 36 100.0 38 .................................... CAGATGGTGCTCCGCGGCAAGCTGACGCGCCAGTTGCG 1026928 36 100.0 37 .................................... TGTGACACGAGGTGTGCCTCGTCAATAACGACGAGAT 1027001 36 100.0 35 .................................... GGTGCATAACTTATTGATCTGACTGGGCTTAGCTG 1027072 36 100.0 35 .................................... TTGACACTGTAGTGCGGCGTCCAGTGCCAGCGCGT 1027143 36 100.0 35 .................................... CGGCTTGGTCACGGGCTGATTACCGATCCGCCAGC 1027214 36 100.0 36 .................................... ACCTGCGTTTATGGCCCGCCGGCCACTGTTTGATTC 1027286 36 100.0 35 .................................... TAAATCCGGTCGTCGTCCTTGCACACGGCGTAGTA 1027357 36 100.0 37 .................................... TCAAGGCGCCACGCGACCTCTTCGTTGTCGTGCTCCT 1027430 36 100.0 39 .................................... CCGGCGCCGGTCGGGATCGCGTGCAAGGGGTGCCGACAT 1027505 36 100.0 40 .................................... CGCGTCGGACAAGTGTGACAGGCGGACACACGGGACGGTA 1027581 36 100.0 39 .................................... TAGACCTTGCCCGGCTCCGGCTCAGGCAGGCCAATGACC 1027656 36 100.0 38 .................................... GCGCGAACAAGGGCGAGCTTAGACTGGGGGAGCGGGGA 1027730 36 100.0 38 .................................... CGGCGTGACGCCCGCCAGAGATCGAGTAACTCGATGGC 1027804 36 100.0 37 .................................... AGTTCACAATCTCCATTTCGTTCTCCTTTCTTTTTCG 1027877 36 100.0 37 .................................... GCTGCGGTGAGTTCGGCAATCAGTTTGCCCCGGCAGG 1027950 36 100.0 36 .................................... GCGGTCAGCGTTAGCCTGTGTCAGTTCGCTTCTGAC 1028022 36 100.0 38 .................................... GCAAGCCTATCTCGACGCCATCGCCCGTCGGGCTGAAG 1028096 36 100.0 38 .................................... TGCTATGCTGCCCTGCTTGAGGAAAGTGCCCGTCTTGA 1028170 35 88.9 0 .............-.......TT...T......... | ========== ====== ====== ====== ==================================== ======================================== ================== 51 36 99.7 37 GTTTTCCGCTTTGAAAAAAAGCGGCTCCATTGAAGC # Left flank : CGGTACATTGTTTGCTATGACATTGCCAATCCGAAGCGGTGGCGTCAGGTCTATCGGATTATGCGTGGATTTGGCGATCCCTTGCAGTATTCGGTTTTTCGGTGTGATTTGTCGGCGACGGAGCGTGTTCTGTTGCTGATGGCGGTGACCGAAGTAATCAACCAGCGTGAGGATCGGATTATGCTGGTGGATGTTGGTCCGGTGGACGGGCGTGGCCGGACTTGCATCGAGGCGCTTGGGAAGCCTTTGGAAGTGGCGCCGACGGAGCGCATCACGGTTGTTGTATAGCGTTCATTGGCTTAGAGTGGTGACGTGTGGGGTCTGTGCGAGAGGCGGGGTGGTGCCGTGTGGTGCGGGAGCCGCTCGCAGGACTTAGGGGCTTATGTGGCTTGAGTTTACAAAAACAGGGTTGACGCGATCCGGGTTTTGCGGGTACAAACTCTCCGCCGCTCGCAAGATACCCTGCAGGTCTTTGAAAGCAAGGGACTTGTGAGAGTGCG # Right flank : CCCGATGCTTGACAAGACAACCAAACTGTGCCAAACTTTTTCCACTTTGAAAAATTGGCTTCATTGAAGTGGTTTTTCTTTCCGCAAATGCTAACCGAAGCGACTAATGCTGCTTTGAATGAAATCGGACAGGCATTGATTCGTGGTTATGAAGGGAGAGTTTATGAACACAGAACTAGAGTTCTTACGGAAGATGATTGAGCTGAGTTTGAAAAGGAAAAAGCGCTAAAGAAATAACCGACGAGATGCTACCAGCGTTTCAGGAAATCAGGGCACGGATAGAACAGGAAATGGCGGAACTTCTGGCGAAAAGAAAAGAATACTTCCGACGCCAAAAGGAAGAAGAATAAAAATCAACTGCAGTCTGCTTGCCACGCCGTTTTCCGCTTTGAAAAAAGCGGCTTCATCAAAGCGGCAGAAAAGCGAGCGGTGAATGGTGAGTGATTTTCTGCCTTGAAAAAAGCAGCCCTGTTGAAACCTTTGCAAGGTCTCAGTGAACC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCGCTTTGAAAAAAAGCGGCTCCATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-9.30,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //