Array 1 7598-8044 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOGE01000145.1 Streptomyces sp. NRRL S-1448 contig145.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================================================================== ================== 7598 30 90.0 31 ...........A.....G...........G TCGCCTTGCCCAGGGGCAGGGAGTCGACGTC 7659 30 90.0 31 A................G...........C CGACGAATGCGTCCTCGGCCCGGGCCCTGGC 7720 30 90.0 31 .................G......T....C AGGTGCCCCTCGACGCGTACCGGCAGAAATT 7781 30 93.3 82 .................C...........C CGGCCTCACCCCGCGCGACATCGACGCCATCGTGCTCTCGGGGTGAACCGCACCGGCAGCGCGTGCCATCTGACGCTGACGG 7893 30 93.3 31 ............................AG CGAAATCCCACTCCTCGCCTTCCTGGGCCTC 7954 30 100.0 31 .............................. GATGCCGCCGGGTTTTGGTGGTGGGGCCGTC 8015 30 86.7 0 ........T..............A.G...G | ========== ====== ====== ====== ============================== ================================================================================== ================== 7 30 91.9 40 GTGCTCTCCGCGCGAGCTGAGGTGAACCGT # Left flank : ACGACAGCACCGCCCACCGCCGATGCCGGCTCTACCCCCTCCCCACCTGGGCGCGCTGCCTCGTACGCGCCGCCGGCATCCACGGACAGCTCAAAGACCGCGCACCGGACGGTCCGCTCTTCCCCCTCATCACCGCCCGATACGGCGAACAACTCCGCCTCACCGCAACCGGAATCCGCTACACACTCGGCCACCACCGGCAGAAGGCGACACCGAGGCCCCCGTCCCAACTGTCAGCTCCCGCCCTGCCCTCACAGCCCTGACCAGCAACAACACATCTCACGCCATACCGACCGGCAACCAAATGACCCGCACCATCACCAAAATCGTCAGCACCAAATCGGCATCCCTGACAGCAACCGAACCACCCACGAAAACCCACTGAACAGCAGAGAGTTCGACACTCACCCACTGGCATCACAACGCCGAACCACAACCGACAAAAACCCGCAGAACATCAGTGAACCGTCCACTGTGTTCCGGTCGCTGGCCGGGACGGA # Right flank : GGGCCCCGCGAATCCCGGCCCGCCTGTGGCCGGTGCTGGATCCGTGGAGTGCACGTCGCCGCCCGGCCGCACGCGGTGCTCGGCCGACCGGCCCGGCGCCGGCGCCTGGCACGGAGCGCGGCAGCTGGAGGTTCATCGCCCTCAGGTGAGGGGCCGTCATCGAGAACGCCCACTAGGGCCGCGTCGCCTTCCCGCACGCGTCCCCGGAGGACTCACCCCGCCCGACCGGCACACTGCGGTCGTAGGGATCGATCTGCGTACCGGCCCCGTCCGCACTGCCACCCCTCCACTACTCGGTGGTACCGTATAGCGGTACTCGGTATCACCTAGTACTGGCAGGCTGAGGAGCACCCACGATGGAGGACCTGACGGAGATGTTGAAGGGCACGCTCGAAGGGTGCGTGCTCGAAATCATCGGCAGCGAGGAAACCTACGGGTACGCCATCACCCGTCAGCTGAACGAGCTCGGCTTCACCGACGTCATCGAGGGGACGGTGTAC # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.60, 5:-1.5, 6:0.25, 7:-0.67, 8:1, 9:0.34, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCTGAGGTGAACCGT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 36777-39113 **** Predicted by CRISPRDetect 2.4 *** >NZ_JOGE01000033.1 Streptomyces sp. NRRL S-1448 contig33.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 36777 29 100.0 32 ............................. TCTCGGCGAGACGCGGTACGTCGTCCGCCTCG 36838 29 100.0 32 ............................. CGCAGCCGGGCGCCCGCGCTCTTGGGCAGCGG 36899 29 100.0 32 ............................. TAGGTCCCCCGCATCTCCAACCCCGCCTCTCT 36960 29 100.0 32 ............................. CCCGATGACCCAATCGGAAAATGGCCTCTGAC 37021 29 100.0 32 ............................. TGGCGCGTGGGGGTGCGGTCCGGGTCCTCGGC 37082 29 100.0 32 ............................. CAGCCTGGTGCATCGTCCGCTTGAGGGCAGAG 37143 29 100.0 32 ............................. CGGCTGATGACAGGTCAAATGCGTGTATTTGG T [37147] 37205 29 100.0 32 ............................. TTGCGGTCCAGTTCGGCGTTGGCGATGTCAAC 37266 29 100.0 30 ............................. CGGCAGACCGGTGGCCGGGCCGGCGGTGGG 37325 29 100.0 32 ............................. ACCCGGGACCATTCGCTGAGGTGCGGCCGGGC 37386 29 100.0 33 ............................. GGTCGTGCCGCCTCGATCAGTTCGGTGACCACG 37448 29 100.0 32 ............................. TTGGTGCTGACATGGTGATCATGGTGCCGTGA 37509 29 100.0 32 ............................. TCGATCCTGGCGGGCACCGTGCTGGTGCGCGA 37570 29 100.0 32 ............................. AGACCGAATACCATCCCCCCGACCCCGAGAAG 37631 29 100.0 32 ............................. GCCGTCAGGTGTGGGGACCGGTCAGCGAGGTC 37692 29 100.0 32 ............................. CCGGAGTCGGAGTGCTGCCGGACGATCCCGGC 37753 29 100.0 32 ............................. AACGCCAACAACGGCGCCCGCCGGCTCCGCGA 37814 29 100.0 32 ............................. AGCTACGACCGGACCAACGGCCCGTCGGAGGT 37875 29 100.0 32 ............................. CCGATGGCCCGAGAGGCCGAAAGGGGGGTGCG 37936 29 100.0 32 ............................. ATCCCGAAGCTGAGTGGTCGGACGGTGGTGCT 37997 29 100.0 32 ............................. TCCACATCGACGAAGGGCGCGTCCGTGCGACG 38058 29 100.0 32 ............................. AGGTGGCGTAGCTCGGTGTCCCCCGAGGCGTC 38119 29 93.1 32 ...C....................C.... CGCCCGCAGGCGATCCGCCAGAGCGGTCACGG 38180 29 100.0 32 ............................. GACTCCGCCGGGCTGCCTCCTCGGCGAGGGCC 38241 29 100.0 32 ............................. TCGGAGGCGGTGAACTCCTCCAGAGAGCCGCC 38302 29 100.0 32 ............................. CACCATGATGCCCGCTGCCGCCTTCGCGGCCG 38363 29 100.0 32 ............................. CAGCTCCAGGACGGGGGATTCAGGGCTGATGT 38424 29 96.6 32 ............................G ATCCCCCGCGCGATTCGTGAGGAGCACAACGC 38485 29 100.0 32 ............................. GCCCTACGGTCAATCCGTCGCCCCAACTTAGG 38546 29 100.0 32 ............................. ATGGTCTCGGCAGCTTCGGCGTTGGCCCGGTG 38607 29 93.1 32 ....C.......T................ GCTCGTCAGGTGCTGCTGTGCGGTTGTGAGTT 38668 29 96.6 32 ..........T.................. GACACGAACCGGAGCGCCCTCGGCGGCATGAT 38729 29 100.0 32 ............................. TTCGCGGCTGTCATCGAGGGCCAGGCAGCCCT 38790 28 93.1 32 ..........T......-........... GGACAGAAGCTGTTCAACCAGCTGCAGGCCGT 38850 29 96.6 30 .C........................... AGGGCCGCGTCATCACCATGCTGGACAGGA 38909 29 96.6 32 ....C........................ TGCTCCGCCAAGACCCGCAGGCCGCGCTACGG 38970 28 75.9 32 .....TT.....AAC..-A.......... TGTTCGTGGACGGTGGCAATGCGCCTGGCCCT 39030 29 75.9 27 .................C...CCCAC..T GAACAATCGCGCGTTCATGAACCTAGA 39086 28 82.8 0 .....-...A............CA..T.. | ========== ====== ====== ====== ============================= ================================= ================== 39 29 97.4 32 GTGGTCCCCGCGCCTGCGGGGGTGTTCCC # Left flank : CATGCGGGAGGAGCCTGTCTGGTGACCATCATCGTCCTCGCCAATTGCCCTGCCGGACTCCGCGGCTTCCTTACCCGCTGGCTTCTGGAGATCTCCCCCGGTGTCTTCTTGGGCTCCGTCTCCGCCCGGGTACGGCACATCTTGTGGGAAGAAGTCCGCCAGTACCGGGGCAAAGGAAGAGCCCTACTGGCCTACCAGACCAACAACGAACAGGGCTTTGCCTTCGCGACCCACGAACACGCATGGCAGCCCACCGACCACGAGGGCCTCACCCTCCTGCATCGTCCCTCTCCCTCGTCCCCCACCTCGGGCGCCAAGTCTGCAGAGCCACCGCAGCAGGGCTGGAGCAGGGCTGCCAAGAGACGACGGTTCGGGAATCGCTAAGTAGGCAGCTTATGCGTAGTTGTGCGGCGTCTATGCAGTTTGATGACGAGATGCCGCTTTCCGTGCAAGTGAATGAAATCCATTCGTCCACAGTATGAAGGTGCAGGTCATGGCCT # Right flank : CGCCGAGAGGCAGCGGGCGACCGAGGTGACGGGCGGGGAAAATGGCGCGGGATTACGACAGTCAATTGCTGGAGTCGGTGGCAGTGCGCCGGCGCAGGTTGCGGGATGCCCTGTTGTTCGGTGCGCAGCGGGGGCGGCGTACGGCTGACGAGCGGCTTGGGAAGGTGTTCGCGGGCGTCGCGATCACGGCTGTTTTGTGTGCGGGGTGCGTGGGGTGGTCGTTCCTTCAGCACACGCTGGCGCAGAAGAAGGTTGAGCAGGAGAAGCAGCAACGGCAGGTGCAGCAGTACGAGCAACCGACGAGGCAGGCAAACCCCTAGAAGTCCACAGACAAGTTTCGGACAGGCTTTGCAGCATTCCAGGGACATGCCCGAAGCGCCCTGAGTAACGGCAGAGGGGTTCCCCGGCGCGGAGCCGGGGCTGAACTCAGCGGTTCAGCATGTCCGCCCGAGAGTTCGTCAACGCCGCGATGATAGGTTCCCGTAAGTGGTGAGCAGAGC # Questionable array : NO Score: 6.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCCTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-27] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //