Array 1 21011-22123 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKIB01000008.1 Enterobacter bugandensis strain e977, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 21011 28 100.0 33 ............................ TTGCGCGAATTGCAGAAAGAAAGAAGCCCGCGG 21072 28 100.0 32 ............................ TTTCAACAGCCTAGCAGCTTGACCACGTACCC 21132 28 100.0 32 ............................ TGAAATGCGCACGACGAAAGTTATGCGGCTGC 21192 28 100.0 32 ............................ ACCAGCGTATTTAATAAATCTTCATCAAGCCC 21252 28 100.0 32 ............................ TTCAACATTACTTTCAAACTCTATGCTTGATA 21312 28 100.0 32 ............................ TGACGAACTGCGACGCGGTCAAATCGTGGGAA 21372 28 100.0 32 ............................ CGCGTGCTGGTGCAGAACGACAGCGATATCCA 21432 28 100.0 32 ............................ ATCGCCACGATGACAAACAAGCAAAGAAAATC 21492 28 100.0 32 ............................ TGTCATATCGCCAATACTGATTGATCGACTTT 21552 28 100.0 32 ............................ GTGAACAACATTGAGCTGAGGTTGCAGTTAAT 21612 28 100.0 33 ............................ CACCAGCTGCATCCATGCCCCGAACCCCAAAAT 21673 28 100.0 32 ............................ TCCGGCAGAGACGGCCCCTCATTTTTGAGCAT 21733 28 100.0 33 ............................ GTTCAATATCGCGTTCGATATCGCTGACATCGT 21794 28 100.0 32 ............................ TCGAGCGTCATCGTTGGGGTTGATTTGGATTT 21854 28 100.0 33 ............................ ACCAGCCGAGCGCCCGCCGGCAAGCTTTTGCGG 21915 28 100.0 32 ............................ CGACGCGATTCAGGTCACCGGCACAAGTCAGT 21975 28 100.0 32 ............................ CTGCGGAGCGGGGGGACCAACTTCTGAGGCGC 22035 28 100.0 33 ............................ CGTGTCGGAAGAGGGACAGGGAAACGGGGCGTT 22096 28 92.9 0 ................T......T.... | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTTCCGCAAACGCAGCCCGTTTGCCGTTGTCTCGGAGCCTACCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAGGTGGTGGAATTTGAGGAAGAAGCGGAACAACCGCGACAAAAAGAGTGGTTGCTTGAAGATACAGAAACGAAGTGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGACCGCGACATGCTGCCGCTTCTTACAGGACTGCTCCATGACATCACGCATTCTATGGTTGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAGTTTGTGACGTCCGAAGTAGGCCCCTGACGCCACCGGCTAGACCCTTTTTTTTGATGATTACGTAACCTTTTGATTTATATAATGCGAATTTACGTACCAGAAAAAAGGGTTTTATGCAGGAAGTTGATTATTTTCTTTTCTAACAATAAGATGGCGTAGTTTCCTTTCA # Right flank : AGCCCCTCTGGGCTTTAATGCCGTGGAAATGGCGTTACTATCTCACAGACAGTACAAGTAAACCCATCCCTCACAAATATTCACCTCGTCTATTTAAAAACGAAATACCATCATCCACATGCTGTCCATTTTCAGATTAAATAAAAATCCCATTCAGGGGTTAATTATATTTCCGTGTATATATTATTTGTAAAAATAATACTTTTAAAAAATAATGTGTTTTTGTTTAGTTATCACAGGAATTTCCATTCATTTGATATATATCACATTTGTATTTCTCTCATCTCCGATAACATACCCGCATTCAAAACCTTGAAATTAAAGCCATTGCTATGCCTGCAAACAGCGTTACCCCAACAGATTTAAAAACCATCCTGCATTCAAAGCGCGCCAACATTTATTACCTGGAGAAATGCCGCATCCAGGTAAATGGTGGGCGTGTTGAATATGTCACCCAGGAAGGAAAAGAGTCTTTTTACTGGAATATTCCCATCGCGAAT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 32009-32638 **** Predicted by CRISPRDetect 2.4 *** >NZ_FKIB01000008.1 Enterobacter bugandensis strain e977, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 32009 28 100.0 33 ............................ TGTATCGGCCTGATGAAAGAGCTGCGCTTGTAT 32070 28 100.0 32 ............................ ACAACCTAAGGGGTTTAAAGTGCACTCACCGA 32130 28 100.0 33 ............................ CTGTTATTATCTTTCGCTGAAATCTTTTCTTGA 32191 28 100.0 32 ............................ TGATTGGCTCCATCAACCTGGTGGCGCAATGG 32251 28 100.0 32 ............................ TCCTGGACTCTCTCTGTGTGTTTTGGTGCGAT 32311 28 100.0 32 ............................ AGGAAAACACATTCCTGATTGACGATTCAGAG 32371 28 100.0 32 ............................ TGTACCGCCATAGCCAGTAATCTGGATTCTGG 32431 28 100.0 32 ............................ TCACCCATTCTCTGAACCACTTCACTGATTAC 32491 28 100.0 32 ............................ GGTGAGGGCCGCACGCTGGACGCGTCGGAGGA 32551 28 89.3 31 ...........C...C......C..... ATAGAAAATAAGGCCTAACAGTCGTCGCACC C [32576] 32611 28 75.0 0 ........T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 11 28 96.8 32 GTGCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGGCTACGCGTTCGCTCTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATACCGGTAACGCGCAAAATGTCCGCTTTCGACATGGCCGTCCATTCATGAATATTGTCGAGCACGCTGACGGGCAATCCCTGGTTGAGAAATTCTATCAGCCGCATACCTCTGTTCGCGGGTAAACCGGCGTAGCGCCAGAGTGCGTTATCAGCAGGTTTCTTGGCGGGGATCCAGGTTCTCATGTTACCTCCTGATTAATGTCATTTGTCATGGTTAAGTATAGCCATTTGTCAGATGGAGTGGAATGGGGATTTTTTGTGCTGGGTGGTTTGTGAGAAGAACGATGTTTTGACCCTAATTTTTAACGGTTGTGTAATTCATTGATTTTAAATGAGTATTTTGGGTGGATAAAAAAGAGGGTCAGAGAAGGTTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : GCTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACAGCACCACTAAAAAATAAGGCCGGGAATATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAAAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACAGGAAGCGCATTCGTAAAGGGGAGACAACA # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //