Array 1 520165-520793 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR994655.1 Serratia sp. Tan611 isolate Serratia sp. Tan611 chromosome Tan611, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 520165 28 100.0 32 ............................ CAATTTTTGCATATGTGAAGCGATGCAGTTCT 520225 28 100.0 32 ............................ ATTTTATCGGCGATACGGTTGCTTGTGCTGTT 520285 28 100.0 32 ............................ ATCAACAATCTTTTTGTTCTGGGTATCTACGG 520345 28 100.0 32 ............................ GTATAGCCGTCTCCATTTACGTTATAGATTGA 520405 28 100.0 32 ............................ GTCAATCTTAGAGAGTACGGAAAAAAACGCAT 520465 28 100.0 32 ............................ GAAGACAGAGAGCGGTAATCGAGTCATAAACA 520525 28 100.0 32 ............................ AGTACGGATCCGAAAGCCATGCGTGCTGAGGC 520585 28 100.0 32 ............................ TGGAAGGTATCGGCGACGGTTTCCTGACGGAT 520645 28 100.0 32 ............................ CGCCACTATAAGAACGGCGTCAGCGATGCTTA 520705 28 100.0 32 ............................ AGGGAATGAAACCGGCGGTTCATACCAGCGAT 520765 28 100.0 0 ............................ | G [520791] ========== ====== ====== ====== ============================ ================================ ================== 11 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGAATTGACCGAGCTGGAGCAGCACGGCTGGCGTAAAGGCCTGCGTGATTACACCGAAAGCAGCGCGATATTGCCGGTGCCGGCAGGGGCGGCGTATCGCACGGTGCGTCGCGTGCAGGTGAAAAGCAGCGCAGAGCGGCTACAGCGCCGTTCGGTCGCCAAAGGCTGGCTGACGATGGAGCAGGCGCAGGAACGTATTCCGGCGGCGAAAGCGCAGCGCAGCACGCTGCCGTTTATCCGCCTGAAAAGCCTCTCCAACGGCCAGTCTTTTTTATTGTTTATCGAACAGGGCATGTTGCGCAGTACGCCGACCGCCGGTGAGTTCAGCGCTTATGGCCTGAGTGCTATCGCCACCGTTCCCTGGTTCTGACCCTTTTTCTGTACGCAATCCTAACCTGTTGATTTAGCAGGTTAGGATTGAAGCGTCTGAAAAAAGGGTTTTTAGCGGAAGAATGAGGGTCTGGCTGTTAAAACAGTCAGTTAGATGTAAATGGCAACA # Right flank : AATCAGAATTCAGGCCGGGTTAACCGGCCTTTATTTAATCTGATTTATTCATTTTTTTTCTAATATGACGAACCAGCATAAATGTCAGCTTGCATAAAATTATGGATATTATTGTGTTTAAAAATAAAACTATTGCTATAGCCATGAAATCCCATGGTTCCGGATACCCCCCAATAATATCTGTAATGTTTGTTGCGGTATCCAGAGACATTACATGATGTATGTTGCGCCTGATGAAGTGATAAAATGGAAACCATACGCCAACGTTCATCAGGAATATGATGAAAACAGCTAATTTTGCCAGTATTAAAAATGCCTTTTTCATCCGCTTACCTTGCATTCTCCGTTGCTAATCACATCAATGATACCATACGCGCGCAATCTCATATTTCTGATATTGATTGTTTTAGTCCTCAGTAGAGCACTACGAATTGCTGCAAAGTCTGAGTGATGTTTTAGCGTGATACAACCATATGATATCGTTCCCGGATGCAGTCTAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2104895-2106004 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR994655.1 Serratia sp. Tan611 isolate Serratia sp. Tan611 chromosome Tan611, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2104895 28 100.0 33 ............................ CTGCTATTTCAATGATGAGCTGGAACAGTGATT 2104956 28 100.0 32 ............................ TCTTTAACGCCTCTTTTGTCCGTGATGTCGAT 2105016 28 100.0 33 ............................ CCTAATAGCTTCTGCGTAAATTCCTTTCCTTTT 2105077 28 100.0 32 ............................ TTTATCCCCGAAGCCAGAGGATGTGGTGTGTC 2105137 28 100.0 32 ............................ GAACGGTTCGGAGATCCACGTTATCGGGCTGG 2105197 28 100.0 32 ............................ AGACGGTAACTCGACTTTAAGCCACCATCCCG 2105257 28 100.0 32 ............................ TGGTCAAACCGGTATGGCGGGTTCCTGCTACG 2105317 28 100.0 32 ............................ ATGGTGAAGTATTCCGCCATGGTGGAAGAACA 2105377 28 100.0 32 ............................ AGGACGCCTTAGGCTTCCCTTTCGGAGACATA 2105437 28 100.0 32 ............................ ATCAGCGATGTATCTGAATTGCGGCAAAATTC 2105497 28 100.0 32 ............................ TTGCCGCGCGCAGCACAGATAGGCCAGCTCCA 2105557 28 100.0 32 ............................ TCGGGGACCAGCAGGTACGGCGGCACGTCCAG 2105617 28 100.0 32 ............................ AGAGTCGAGGTGCGCGGCCGCATGAAAAGCCC 2105677 28 100.0 32 ............................ GCTGTTGTGCATAGCGTGGTACTTGGACGGGG 2105737 28 96.4 32 .G.......................... CGATCGCATCCACATCATTATCCATCAAGAAG 2105797 28 100.0 32 ............................ GCGATGAAGTTAACTCAATCCTCAACGAATAC 2105857 28 96.4 32 ....................T....... GCGCAGGGCTTTAGCTGTCTCCGCTGCGAGCT 2105917 28 100.0 32 ............................ GAACGGCGCCGAATCTCATTTTCTCGGCACGA 2105977 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 19 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTTCTTCTGGCCAATGCCGGAGACAAAGAAGTGGTGAGTGGTCGTCTGCTTAGGTACAGCGACAGTCTCGTGTTTCATGGTGAACGTTTGCTGTGCACAGCCGGTAACCGTCATGGCAAGCACTACGGCGGCGAGTAATTTTTTCATTATTTTCAATTCCTTTTTAATTAATCAATCAATATAAAGCGCGGGGATAATGCCACGCTTACAGAAATTTACAAGTGTGGGTGACAATAAATAGCGGGCGGGGCGGAGAAAAATGCCGCAGAACACAGGCGATAGTTCTCGGGCTTTCAACGCGGCAGCATGGCGGTGCGCCAGAGGGCAAGATGCGGCCGCAGTGCACGGTAATGTATGGCTGGCTTAGAACCCTTTTTTTTACTCTGTTTGTAACCCATTGATATTTAATGCTCGGCTTGGCAGGTGAAAAAAAAGGGTATCGGCGGCAGAAAGGGGGAAAAGGCTTTAATTATTAAGCTGCTGAGCTTAAACTCTAACA # Right flank : AACGCCCCGCGCTTAGATATTTCACTGACCATCTTTATTCACAGCAGCCTTATTGGTGGTATAAAATATTTTTATTCAAAACGCTGGTTTGCTATGGGATTGAATGAAATATGGAAGTGTTAAACAGAACATCCGCTGTGCTCAGCTTGCCGTTAACCATACTGTGTGTTTCATTCTCCTCGCTGACAATTATGGGGGAACACAACTCGCTGGTTGATGTTTTCCTGTCGGTGATTGTTTTTTTTGGTTTTCTTAATCTATTCCGGATAGCAGGAAAGTTGATCGCCTGGTTTAATGGGAACGCTAACCAGGCATAGACATGAAGCGAGCCTCTGCTATTTCTGCCGGTCAGATAAATAACGGGAACCCTAGGGTTCCCGTTATTTATTGGTCATTATCGCGTGGCGAAAGGGGATTAACGCCCATCCACGGCTGCCGGGCTGTCCGCCTCGGCCAGCGCATCCTCCAGCACCTCGAACAGGCGGTCGATCTCCTGGCGG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //