Array 1 54691-56922 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAZU01000004.1 Lactobacillus helveticus strain DS3_8 DS3_8_4_length_88460_cov_52.359786, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 54691 32 100.0 34 ................................ AATGACTGATGAACAAAAGACAGCATTGAAGAAT 54757 32 100.0 36 ................................ TGTTCAGCTCTATCTTGATGTCAAAGATCCTAACGG 54825 32 100.0 36 ................................ ATTCTGTAAGGACTGAAACACAAACTCTAAAATATA 54893 32 100.0 34 ................................ ATCGTTATGCAGGTATTACTACTGCTACTAATAC 54959 32 100.0 35 ................................ TCAGGAGATACTGCCGTTGGCTTTGAAGATAAATA 55026 32 100.0 35 ................................ AATTCATTACTGGCATTACTCCAGTCACTGCGCCA 55093 32 100.0 35 ................................ GAAAGGAAATATATATGTCAGTCAAAGTTAATGGT 55160 32 100.0 35 ................................ GATTTTGTTAGAAAATTAACCGATGATTTTTTACA 55227 32 100.0 34 ................................ TACCCACCTAGCTTAGCACCTACATGGAATGACA 55293 32 100.0 36 ................................ CATTGTAGTAAAAGTTGCAGGGTCTTGAGTAAGAAC 55361 32 100.0 34 ................................ AATTAAGTCTAATCATAGGGGCAATAATTGCTTA 55427 32 100.0 35 ................................ TTTTTCGTCTTCTGCTCCTAGTGACTTAGTGAGCC 55494 32 100.0 34 ................................ AAGTGAATCGACAGGTATTGCAGATGATGATTTA 55560 32 100.0 35 ................................ AAGATGTGGAAGAGTGCAAGCACACACAGTCCCAA 55627 32 100.0 34 ................................ TTAGAATACTTATGATCCTTAGATAGATGAACCG 55693 32 100.0 35 ................................ CTCTGATCTGCTCAGCACGTTGCTCTTGCTTTGAA 55760 32 100.0 35 ................................ GATTATTCGGAACAACAGATGATCCTAAATGCTCA 55827 32 100.0 35 ................................ CTAAAGCATACTTAGTAGCATATGAACTGGCTGAC 55894 32 100.0 34 ................................ TACAAACACTTGCCAACTTATAATCCACAAATGC 55960 32 100.0 34 ................................ AAAGGTGTGTGGATACCTGCTGAATATTGGTTAG 56026 32 100.0 35 ................................ AGCATCAACGGCTCTAATTATGTCATTGCCGGTTT 56093 32 100.0 34 ................................ ACCTGATCAAACGTTAGGCAATAGATTAACCGAA 56159 32 100.0 34 ................................ TTTACGAATGTCTTGCCAATTAGTATATTTACTT 56225 32 100.0 34 ................................ AGAATCAAGACCACCTGTTAGCGTTTTACCACCG 56291 32 100.0 35 ................................ AAAGAACATAGTTTGCAGAACTGTTTCCAAGTAAA 56358 32 100.0 36 ................................ GGCTTTAGATGCGTCAAATGCCGCCTGTGGGCTATC 56426 32 100.0 34 ................................ AGAAGATGGATACAATTTTTAGAAATTCCAGTCT 56492 32 100.0 35 ................................ ACACCATATGTGGTCAACGCTTTAATTGGATTACG 56559 32 100.0 34 ................................ ACTAACTGGAACATCCAAGTACTGTGCGGAAACC 56625 32 100.0 35 ................................ ATCGGCTAATTGCTTTTCAAGTGAATCAGCCTTTG 56692 32 100.0 34 ................................ ACTGAGACGCTAGACGCTATTAGATCACAGTCAC 56758 32 100.0 35 ................................ ATCAAGCTTGCCAACGGGTCGATTTTATTCTGTGA 56825 32 100.0 34 ................................ TTTTGAATAGATGGCATGTAAGTCTGATATAGTT 56891 32 96.9 0 ...........C.................... | ========== ====== ====== ====== ================================ ==================================== ================== 34 32 99.9 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGTGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTTAGGTCCATTGCACTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCGGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,10] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.50,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //