Array 1 16650-14549 **** Predicted by CRISPRDetect 2.4 *** >NZ_JFCH01000046.1 Corynebacterium jeikeium strain Cj47444 276, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 16649 29 100.0 32 ............................. CCGCGCCGCGAAACTAATCGAGTTCGCAGACA 16588 29 100.0 32 ............................. TATCAACATTCTCACGACTTCCGACGTGGAAT 16527 29 96.6 32 ............................T AAGGGGGGTTAAACACTTTTCTTTTTGCCAAA 16466 29 100.0 32 ............................. TACATGGCGAAGGTCGCCGATCCCTCCACCCG 16405 29 100.0 32 ............................. CTGATCGCCGGCAAGGAGAACGTCAAGGACGA 16344 29 100.0 32 ............................. GTGTGCCCTTCGCCGCGTTAGAATCCCAGTTG 16283 29 100.0 32 ............................. GTCATTCTGTACCCGGCTGGCACGTTCTTCTC 16222 29 100.0 32 ............................. TACGAAGGACATTGCTCCGGCTATTAAGAAGT 16161 29 100.0 32 ............................. GAGGAACCTCACCATGACTGCTCGCAACGAAA 16100 29 100.0 32 ............................. GCTAAGGGGCATTCGCCGGATTTGGCTGATAC 16039 29 100.0 32 ............................. AACATGCCAGCAGAGCGGAACGGGTTCATGCG 15978 28 93.1 32 .....-.T..................... CAAGCTGACCGAGGCGCAGCTGAAGCAGACGG 15918 29 96.6 32 ............................C CACGGCTCTACCCTCGCCGCCACATGAGGCGT 15857 29 96.6 32 ............................C CCAGTCAACAGCATTGCCGAAAGCGTCAGCCG 15796 29 96.6 32 ............................C GAACTTGAACGGCACTTCAACCCCGGCATGCT 15735 29 96.6 32 ............................C GCCTGCGGATTCGCAGCACGAACACCACGATA 15674 29 96.6 32 ............................T AGGGTCACCGGCACGGCGATGGGCTTGCACGA 15613 29 96.6 32 ............................T CTGCTGCGCACGGATCAGGTTCTCTTCCTCTA 15552 29 96.6 32 ............................T GAGGCGCCGACCGATCCCGCGAGGTTCTCGAC 15491 29 96.6 32 ............................C CGGCCAGCTAATCACGACCCTCACCTAACCCG 15430 29 100.0 32 ............................. CCTGCGACACGCGCCTGAATATCCACAGACTG 15369 29 100.0 32 ............................. GAATGCCGGCGACCAACGGGAGCAGGGCTTGC 15308 29 100.0 32 ............................. GAATGCCGGCGACCAACGGGAGCAGGGCTTGC 15247 29 100.0 32 ............................. GAGAAAAGTTTTCCACGAAATAAGCGAGCGAC 15186 29 96.6 32 ............................T AGGGTCACCGGCACGGCGATGGGCTTGCACGA 15125 29 96.6 32 ............................C TGCCACAGTGCGGGCTTCTGGTTGCCTAGCGG 15064 29 96.6 32 ............................C ACACAACCTCGAATCGAACAGCCCCATGACGA 15003 29 96.6 32 ............................C GACTGCGTAGGAGGATACAGCCCGATGGGATA 14942 29 96.6 32 ............................C TGCGCCGCCACAGCACCCTTACGGATCTCCTC 14881 29 89.7 32 ..A...............A.........C CGGGTGGACAAAATCACCCATTCATCCTGCTC 14820 29 100.0 32 ............................. CCCACAGGATTAGCGCGCAGATCAGGTAGTAG 14759 29 96.6 32 ............................C CACCTGCTGACCGTCACGCCGCCGGATCGCTC 14698 29 96.6 32 ............................T CCGCGCCCACTGGCGAGGAGTCCTAAAAGGGA 14637 29 96.6 32 ............................C TGGGATTGAGTAGACGTGCCGACAGTGGTGGC 14576 28 82.8 0 ....-....T..............GA..T | ========== ====== ====== ====== ============================= ================================ ================== 35 29 97.4 32 GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Left flank : TATAGATGCTGAGCTGGTGCTGTGGTCGGACTTGGAGGTCGTGGCTTCCAAGCGCAATTGGTCAGACGATGGGCCAATCAGATGATGGTCTTAGTTGTATCTGCGTGCCCTGCGGGTCTTCGCGGTGACCTCACAAGATGGCTGTTGGAGATTTCTCCGGGTGTGTTTGTAGGTCGCCCCAGTGCCAGGGTGCGCGACCAGGTTTGGGAGCGAACATGCGACCTGGTGAAGGACGGACGCGCAATCATGGTTTTTCAGGCCGCGAACGAGCAGGGCTTTGACTTCAAGACCCACCGACATAACTGGGTTCCAACTGATTTCGATGGAGTGAACCTGATTACGCGGCCCAATAACCGGGCGCCTTCGGCGAGGCGACGCGGATGGAGTAAAGCCCGGCGGAGGTAGAGCGGTGGTGATCGTTCGCTAGTCCGGTAGGCGGTAGGGAAAACAAGTTGAAGTAGAATCGGCCTAACGGCTCAAAGAACCACAGCTCAGAGAGT # Right flank : CAGAAAGTGTTATCTTGACGCGTTCTCCACGTATCACCAGAATTCACCACTCCCGCACAGCGGGACGACCTCCAAAATGAAGAAAGCTTTCCATTCAATGCTTAACAGCAAAGAAATTCAATAGGAAAAAACGAAACTATATTGAAAAGATCGTGGTTACTGAACTTCTGATGCTCTCACATAATCAGGACGATGTTCCTTTAGGAAACTCCGTAAGCATTCGCCTGGGTTACTGTCAGGTGAAAAGAGATCAAGAATTTTATCCAACATGTCAGGCGCAATGATCACACCACTTTCGACCGAGTAGTAGACCGCATTCTCAAGTGCATATTCGAATTCTCCCCCTAAGGCGGGACTAAAGGCGTGGTCAATACCTGCAGTGACGAACTGCTCTCCATAACGGGAAAGAAATTCTTCGAATACATCCATCGAGGGATCCGCACGCACCTTACGATCCTCTCCGCTTTACCGCACGGTAGCTAAAAGCGTGATTGTGACTA # Questionable array : NO Score: 5.74 # Score Detail : 1:0, 2:3, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.61, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCCAGCGGGGATGAGCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCCAGCGGGGATGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //