Array 1 25322-23238 **** Predicted by CRISPRDetect 2.4 *** >NZ_QYCJ01000003.1 Streptococcus mutans strain UAB-3 NODE_3_length_338447_cov_26.968, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 25321 36 100.0 30 .................................... GCGCAGTCTCGCCCTCGTTTCGCAAGACAC 25255 36 100.0 30 .................................... TTGTGTTAAAACATGCGACGCTAGAAGATT 25189 36 100.0 30 .................................... TGATAAGCCTACGTATGCTATGCTTAATGA 25123 36 100.0 30 .................................... AGCTGAGTGCTCACTGTCTCTGACGGCCAC 25057 36 100.0 30 .................................... CCAGATAAGCCTTTAACCATGCCGATAATT 24991 36 100.0 30 .................................... CAATTAAACACAAAGAAAAAAGATATAGTC 24925 36 100.0 30 .................................... TTTAACTGCAGGGCTCAAAGCATTCAATCT 24859 36 100.0 30 .................................... TGGCTACCCAAGCGCAAAACAGCTTGGAAA 24793 36 100.0 30 .................................... GCCTCGCGGATGGTCTGAAATCAGACGTGA 24727 36 100.0 30 .................................... TGATTACTTATTGACAGTCATTGATATACA 24661 36 100.0 30 .................................... ACGTCCCAAGAAAAGAACCTTTGAGGACAC 24595 36 100.0 30 .................................... TAGCGGACTTAATCTAGTACGTGGCGCACT 24529 36 100.0 30 .................................... AAAGGACTTTTTTGAATCGCTCTTTGTCTG 24463 36 100.0 30 .................................... GCTCACAACTGATGTTGACCTTGGCTTGCT 24397 36 100.0 30 .................................... TTCTGCACTTTGAACAAGCACGGCGATATC 24331 36 100.0 30 .................................... ATTTTAGTCAAGTCACCGCAAGCGCTAAGA 24265 36 100.0 30 .................................... TTTTTCTCGCTTTCTTTCTCGATTCCTCTT 24199 36 100.0 30 .................................... TGAGTTTGATGAAGCAAATCCTGCACTTCT 24133 36 100.0 30 .................................... GCTCCCATCGATAGATGGAAATAAAGCGCT 24067 36 100.0 30 .................................... CTTGGAACATTCGACCATCCTCGATAATCC 24001 36 100.0 30 .................................... ATCTTTAAGAACAAAGACCCAGCAAATGCC 23935 36 100.0 30 .................................... CGGCGGCGTTTGTAAATGTTGTCGACTTGC 23869 36 100.0 30 .................................... TCTTCTTTTGTTCTAACAAGTAGCTTTTCA 23803 36 100.0 30 .................................... ACTCAAGAATAGAAAAGAGGAAATGATACA 23737 36 100.0 30 .................................... ACCCATACTATGAATTTTTTGAAAAAGTGA 23671 36 100.0 31 .................................... CAGCAATCATGGCTAAACCGTTGGTATACAA 23604 36 100.0 30 .................................... ATGAACTTTCTTTTGCTGATGGGTGACTGT 23538 36 100.0 30 .................................... AGCTAAGTTATCGTTTAGATACGCCGTTTC 23472 36 100.0 31 .................................... CAATTTTATCGGTTCCACCTAGACAACCAGA 23405 36 100.0 30 .................................... ATCTGAGATTTAACAAAATCATCTTATCAA 23339 36 100.0 30 .................................... ACTAGCAACACAGCACCTTTCAGCGCAAGT 23273 35 75.0 0 ..........CA.......A.TG..T-.A.T..... | A [23258] ========== ====== ====== ====== ==================================== =============================== ================== 32 36 99.2 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : AGGAAGAGGAAGGATATTGGGTTGAATTTCCTGAATTTGGCGGTGGTACGCAAGGGGAAGATTTGGAAGAAGCCATGAAGAACGCTCGTCAGATGTTAGAAAGCGTATTGGCCTCCTATCTAGATGAGGGAATGAAACTGCCTAATCCAAGTGAGATAAGGAAACTATCTGTTGAAGATGGCTTTGCAACTATGATTCAAGCAGATCCTAATCCTTATCTCAAAAATAACAAAGCTATTCGAAAGAATGTTACCGTACCTGAGTGGCTAGTACAATTAGCAGATCGTGATCAAGTGAATTATTCTGAAGTATTAACAAAAGCTTTGGAAAGGAAACTACAATTATAAAACAAGAAAAGCGCTAGAAAGATTGATTTCTAGCGCTTTTTTAGGTATAATATAATTAATTAAAATCTTTTAAAAAGGAATTATTTGAAGCTGAATTCTAGCTGAGATAAATGGCGCGATTACGAAATGTCGTGACGAAAATTGGTCCACGAG # Right flank : GCATTATGCGAAAGAGTTTTAAATAAGCAAAAGACACTTGAAGCAATAATTCAAGTGTCTTTTATGGGACTTTCTTTAATTTTTAGGTAATGACCGTTCCGATGACTTCAATTGTATCATCTTCTTTTAAAATGATGTCATCATAATCTGGATTTAATGAGATGAGTCGAATTTCTTTGTTTTTTCGGTAGAGTTTTTTGACATATGCCTCATTATTTACAATAACAACGATAATTTGTCCGTGATGGATAGCTTTAGTCTTTTTAACAAAAATAACGTCACCGTTGTAAAATAAAGGTTCCATACTATTACCATTGACAGTAAGAGCAATATCATGTTCTGGAATTGGTATTGGGTATTTAATGGTTTCTTGTTTTTCATGTCCAACCCAGATACCAGTACCAGCTGAAACTTCACCATAAATCTGAATGTTTTCGTGTTGACGTCCTAAGGTTTGATACAGATCTTTAGCTTTTATCACATTGTCCCAATGAATAATG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //