Array 1 67524-65605 **** Predicted by CRISPRDetect 2.4 *** >NZ_JRUT01000016.1 Lactobacillus acidophilus strain ATCC 4356 scaffold16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 67523 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 67462 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 67401 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 67340 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 67279 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTCGGCAGAG 67218 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 67157 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 67096 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 67035 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 66974 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 66913 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 66852 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 66791 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 66730 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 66669 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 66608 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 66546 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 66485 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 66424 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 66363 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 66302 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 66241 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 66180 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 66119 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 66058 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 65997 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 65936 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 65875 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 65814 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 65753 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 65692 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 65631 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 32 27 98.8 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //