Array 1 3634922-3637050 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016830.1 Xanthomonas fragariae isolate Fap21 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 3634922 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 3634982 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 3635043 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 3635103 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 3635163 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 3635223 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 3635283 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 3635343 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 3635403 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 3635463 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 3635523 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 3635583 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 3635643 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 3635703 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 3635763 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 3635823 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 3635883 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 3635943 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 3636003 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 3636063 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 3636123 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 3636183 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 3636243 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 3636303 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 3636363 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 3636423 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 3636483 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 3636543 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 3636603 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 3636663 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 3636723 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 3636783 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 3636843 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 3636903 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 3636963 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 3637023 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AAATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACGCCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGCCAGGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //