Array 1 170750-167982 **** Predicted by CRISPRDetect 2.4 *** >NZ_QROY01000004.1 Lachnospira eligens strain AF36-7BH AF36-7BH.Scaf4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================================================================= ================== 170749 30 96.7 38 ..........A................... GTAACACAGAACGATGCGACAGCATACGCAGCAGGCAC 170681 30 96.7 35 ..........A................... ATGCAGACTACTGGAAAGCTGGCTCAACAGACAGT 170616 30 96.7 34 ..........A................... GAATACGCTAATAAGTTAATAAATATTATTAATG 170552 30 96.7 34 ..........A................... AAGTACTCCAAACCGGCATATAAAACCCCTCCAA 170488 30 96.7 37 ..........A................... GAGAAGAAGAAAATGATAAGGCTTTAACGGAATCATG 170421 30 93.3 34 ..........A..............G.... AAAGATGATAGTGAGATTGTAATACCTCTTACTA 170357 30 96.7 35 ..........A................... GAAGAGAGCCGTAAAGAATACTAACGCTGCTTTAT 170292 30 96.7 35 ..........A................... GCACAAATAGCACACAGATATTATCCTGTATCAAA 170227 30 96.7 37 ..........A................... CACGCAACAGATATCAGCTATTATTAACGCTTCTATT 170160 30 96.7 35 ..........A................... TGCGGAACGGACAAGAGCGTTGTAGTTCCAGGACG 170095 30 96.7 36 ..........A................... ATATGATGCTTATACATAATCATCCAAGCGGATATC 170029 30 96.7 34 ..........A................... CCTGTAGCAATCGCCCCACCTACAGCCGCAACAG 169965 30 96.7 37 ..........A................... AATTATGCGGCGCATATTATTAGTATTATGTACGACT 169898 30 96.7 35 ..........A................... AGAATCTGTCAGAATGGGAGCCTCCGGCAAGGGGA 169833 30 96.7 35 ..........A................... TTATTATAATCCTCTTCATAATCAAAAGATTTACG 169768 30 96.7 34 ..........A................... TTTCCCCACTGCGGACCATTGTTTCAATTGCTGC 169704 30 93.3 36 ......T...A................... AACATTATTAACGGATTTAATTCGTCTGCTATTTCT 169638 30 96.7 35 ..........A................... TTGTTTGTTAGCGCGATCCTGATGAATCGTGTGCG 169573 30 100.0 36 .............................. TTAGTTACAATTCGGAAGATTTCCTTAAGGGGAAAT 169507 30 100.0 36 .............................. ATTAGAATATCACATAAAAGAAATGAAAAAATATTG 169441 30 100.0 34 .............................. ATATCAACAATAAGCTACAATTCAGAAGAGTTTT 169377 30 100.0 37 .............................. CATGAAAACAAGTAAACCTATATCAACAATAAGCTAC 169310 30 100.0 35 .............................. GATGATTCGGATTATTCGGATTATATGTTAGATGT 169245 30 100.0 36 .............................. TTATATAAAGTGTCTGTTTTCCTCCAGATGACTTCA 169179 30 100.0 34 .............................. TGGTGTGGTTCTCCTTTGTGTGTATAATGCAATA 169115 30 100.0 37 .............................. GAGGATGCACTTGTAATAGATATGACAAGTGAAGATT 169048 30 100.0 35 .............................. TAGTTTAGCGTGTGGTTATTGTGTTAATTACGCAG 168983 30 100.0 35 .............................. TATGGTATAGATGATTATGTAGTGGTATTAGCAAA 168918 30 100.0 35 .............................. CCAGTTGAATACTTAATACGCATATGCGAGTTTTT 168853 30 100.0 37 .............................. TATAGAATTAACGGAAGTAATGGAGTAACCGCAATCG 168786 30 100.0 36 .............................. ATGCATGAGTATAAAGATACTTGTGCAGCATTAAAT 168720 30 100.0 36 .............................. ACAGACTTGAAAGATAATTCCGCAAATGCTGATACT 168654 30 100.0 35 .............................. TGGTTTGAAAAAGAAACATGGGTTGACGCTGTTGA 168589 30 100.0 36 .............................. AAGTTAGACCAAGCGGCGCTCGTTTACGACGCTTTT 168523 30 100.0 36 .............................. CTTGGCAGTTTCAATCCTATCTCTATAGGAATCTCT 168457 30 100.0 36 .............................. TTTAATTTAGGCGAATTGTGCAATCCGTTAAAAATC 168391 30 100.0 35 .............................. GAAGGTAAATGGTACGGCGGTGTCCTGATGTGGGT 168326 30 100.0 35 .............................. GTCGATGTAATACTGCATGAAACTGTCTTTAAGTG 168261 30 100.0 36 .............................. AAATTTAACGGAACAGCGGCTAATAATGCCGTATAC 168195 30 100.0 89 .............................. GAGGATACGTGAGCATATAAGAAGAGCTGGACATCGTCGACAAATAACTATTTTGGTTTTGAGATTTAAAGCTGTATAAAAACTTACGG 168076 30 100.0 35 .............................. TTTATTGTAATATCTGCTTGTATCGGATTATCAAT 168011 30 90.0 0 .....................A..A....A | ========== ====== ====== ====== ============================== ========================================================================================= ================== 42 30 98.2 37 GAATTAATAGTTACATAGTGGGATGTAAAT # Left flank : AAAGCATTTAATAGGTGAGAAAGAATATGAAGGGTTTAGAATATGGTGGTAGTATATGTATATTGTACTTGTATATGATGTTAGTAAAGATGAAAATGGGCAAAAAAGATGGTCACATATTTTCAAAATCTGCAAAAAGTATCTGACGCATATTCAGAATTCTGTCTTTGAAGGAGAAATATCAACAGTTCAATTAGAAAAATTACGGGGTGAGTTGAAACCACATGTTAATACTAAGCTGGATTCAGTCATTTTATTCAAAAGCAGGAGTGAAAAATGGCTGGATAAAGAATTTTGGGGTAAGGAAGATGATTTGACGAGTTTCATAATTTGATTGTCGACCAAAAATAGTGTAAAATATGCACAGAGTCGACAATGGTGATATTGCTATGCTTCTGGCATATTCAGGGCATAAAGTATTAGTAATCTGTTGGCGGATTTAAAGGGTAGACAGAATAACGCTTCTGAGTTGAGAAACAGAGAGACTTTAATGATTACGG # Right flank : TGATACATGATAAAAGGTTTGATTATTCTTTCTTAAAGATGAACTATCAAACTGAATATGAGGTTATATTAATTTCTCATTTTCAAAGCTAGTTTATAAATCTATCGAGAATAAGAAATATTAATTCGATAATTAATACTATTTATGCATCAATCAAGTCTTAAATGTATCTTAGAGCCTTTTTTAACAGAGTTAATATTAATATAATGAATCGTAGATATGTAGTAGATTGTAAATTTAGTTTAGAATATGTAATTAATATAAGCAATCCCCTCCACGCAACCAACGCCACCACAATTCCCACTTTTCTGACAACTACAATTGGTGGAATCCACATTTTACATGGACTATAATACATACATAACAACAGAAAGGACTGACATTATGCTACAGGAGAATCTTATTATGCTGAGGTCGCTTGCGGGTAAGACGCAGGAGGATATCGCAGAGGTTATTGGAATATCGAGGCAGGCATATGCCAAATGGGAGCGTGGTGAAAC # Questionable array : NO Score: 2.92 # Score Detail : 1:0, 2:0, 3:0, 4:0.91, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTAATAGTTACATAGTGGGATGTAAAT # Alternate repeat : GAATTAATAGATACATAGTGGGATGTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.41 Confidence: LOW] # Array family : NA //