Array 1 72249-71749 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_SZUV01000001.1 Acidithiobacillus thiooxidans ATCC 19377 DLNHIDIE_1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence         	Spacer_Sequence                       	Insertion/Deletion
==========	======	======	======	========================	======================================	==================
     72248	    24	 100.0	    37	........................	CCGCCGCCGAAGAGCTGCCGGACTGACAAAGAATTTC 	
     72187	    24	 100.0	    26	........................	ACCTGCCTGAAGGGTCCGGGGGCATT            	Deletion [72138]
     72137	    24	  95.8	    37	.....C..................	CAGCCAGCCAGTGAAAAAACCAATGTGGCTAAGGTTC 	
     72076	    24	 100.0	    37	........................	CTGCCTGCCCACGCGCCTAGATCCTCACGATAGTTTC 	
     72015	    24	  95.8	    35	.....C..................	CGACCTACCGCTTAGGATGCGGAAAATACTGGTCT   	
     71956	    24	 100.0	    37	........................	TACTCATTCGTCTGCGCGTTCGTCAGATATAGCGTCT 	
     71895	    24	  95.8	    37	...C....................	TGCCAGCATCATTGAAACGCTGCTCAAGCGAGATCTC 	
     71834	    24	  91.7	    38	.....C.C................	TCTGACATAGTATCGCGGTCCATGCTGCCATCCGTCTC	
     71772	    24	  87.5	     0	.....C................AA	|                                     	
==========	======	======	======	========================	======================================	==================
         9	    24	  96.3	    36	CCCTGTGTATGCAGGGATGAAAGG	                                      	       

# Left flank :   CGCGTGGCATCAATCGGGATGGCCGCATGGAAGTGGTTCTGCGGGCGTTGCCCGGGGTTTCTTTCCCGGATGAACTGCCTGTTACGGAATATCTTTTGGCGCATGGAATGACGCTGAATTTTCAGTCCGGTGTGCGTATCGTGAAGCAGTCTGACCGTGGCGAGCGTATGCCCACTGAAGCGGAAGCGTTGGACAAGTGGCTGCGCTTGATGGAAAACGGGGGTTTTCAGGTGGAAAGTACCCGTCTGGAACCCTCCGTTATTGGTTTTTACCACAATCGGCTTTCCCGCTTCACGCGTCTGCCTTTCTGGATAGTTGCTGGCAGATTGACCGTGATGGATCCACAGAAAGCGGCTTGTACGATGGTTCAGGGTGTGGGGCGCGGTCGGGGGTTGGGGTTTGGGAAGCTGATAACGAGTTGATCGAATTAAAAATCGGTACGGTAACTTCTGAGCGTGACAAAAAAACGTTGTGAAACGGCATGTTGGAAGAAGAGGTTC
# Right flank :  TAGTTGGTACCATTTTTTAAAAATAATTTGGCATCGCTGGTTAGTGTAGGACGGATATTCCGCCTACCTCAGAGTTTCTGGGTTTTGATTACTATCCAGCGAGGTTTAATTAATATGAAACACGCAACTTATGTAAGGCAAAAGCATTTGGTTCCAGGTACTACTTTGACTGAACGTGTCAAACGGTTGGTTTGGGTAGGTTACGATGTGGAAGAAATTATGGATATCACCGCCCAATCAAAGGGGGCCGTTATGCGGTGTATTCGTAAAGCCGGTATCGGCGGTTATGATGAGACAGGTAACATTTTTATTGATACCCGGTTTTTAGCCGATTTTTGCAAGGATGTTCCCGGCATGTGTGATGGCATCACGAAGAGGTATTGGATTCAAACTAAGGACGAGTAATTGGCCTACCACCTATCGTTCAATAGGAGCAGTAAAGCTCCATTTGGATGTGTCGGTATGGTTTACCCTGTGTATGCAGGGATGAAAGGAGTCCG

# Questionable array : NO	 Score: 2.85
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.81, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.81,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCCTGTGTATGCAGGGATGAAAGG
# Alternate repeat :   CCCTGCGTATGCAGGGATGAAAGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [6-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.27,0.78   Confidence: MEDIUM] 

# Array family : NA
//