Array 1 170556-170769 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035934.2 Acinetobacter cumulans strain WCHAc060092 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 170556 28 96.4 32 .........T.................. AGCGGAATGCGATGACGGTGTGAGATCTCAAT G,G,A,AT,G [170559,170562,170565,170567,170570] 170622 28 100.0 32 ............................ ATAAAAAGCGTCAGACTAAAAACAGCACGGCG 170682 28 96.4 32 G........................... AATATCGCTATTGTCGGTGGTGTGGCCTTGCT 170742 28 96.4 0 G........................... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 ATTCACTGCCATATAGGCAGCTTAGAAA # Left flank : CTATTTACTATATTCATTTAAGGTTTTTTATGAAGCACTTAGGATTTGTTGGAAAAAGTACTGAATATTTAGGGTATACCCATGTTGAAATTATCAATAGCTCATTACGCTTATCTTTCAATATTCCATCGAAAAATGATCTAAAAGAAACCTTTAAAAAGATGGTCGAAAATAACTATGATTTACTTATGGAAACATCAGCTGAAATAGAGTTCGATTTAGAAAGCGAAACTATAGCAAAGATAGAAACCATCATAAAAGAAAAAGAGATTGAACTTGATGAGTTTGTCCAAAATGCGCTGATTAAATTTATCAACCAAAATGAATCGACTAAGATTGATTAACCCTTAAATGTAGATAATAAAAAGCCCAACATCCTGTTGGGCTTTTTCGTATGGGTTCGCTCGGTATAACTCCTGTCGTACCTTACAGTCCTTGTGCGTATCTATGTTCTTATTATTGTGTGGAACTTCCTGTTCCTGATGAATCCATCATAGGAA # Right flank : ATTTAAGCTTATCAACCTTGATTTGCTGTCCAGGTTCACTGCCATACAGAAGACAAAACTGGATTTACCATTATTTAAGCTTTTCTGTTGCAGAAAGGCTTGGTACGCCCGGTCATTCATCTGGATCGTGCGGTCAGAACCATAAGTTTTGGTTCCACCAAGCACACCATTCACTAACGCTTCACGAATGTGGATTTCCCGACGTTGTAAGTCCACATTTTTCCATTGCAGACCATCGATTTCACTGGTACGCATACCCGTAAAAAAGCGAATGGTGTAATAGGGGCGGAAGTCTTCACGCACTGTGGTAAGAATTTTATGCACCTCTTCCAGAGAAAAAGGTGTGACTTCAATCTTGCTTTCCTTCAGATTGTTAATATTTTTATAAGGCGACTCAAACTCGTATCGTTCAGCCGCATCATTGAGTATCATACGTAAAGGCGTCATGATTTGATTGATCCTCGATGCTTTTAGACTTGTCTGATCTTTTCCGTGAGTCA # Questionable array : NO Score: 5.41 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCACTGCCATATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTGCCATATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.90,-5.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.78 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2250276-2249346 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP035934.2 Acinetobacter cumulans strain WCHAc060092 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2250275 28 100.0 32 ............................ AATCAAGAATGCCATCCATGGCAATCTCAGAA 2250215 28 100.0 32 ............................ TTCGGGTGGTTTTTTATTAGCTCTAACTTTAC 2250155 28 100.0 32 ............................ TTTCCGACTTTTAAGAATAAATTTAAATATGT 2250095 28 100.0 32 ............................ AAGTGGCAGACCGTTTACCTTTGCATCGGTTA 2250035 28 100.0 32 ............................ ATGCTTTAAACATAAATTTCTTAGCCCAAACC 2249975 28 100.0 33 ............................ CCAAGTTTCAGCCAGTTCTTCCTGGTCAATCCA 2249914 28 100.0 33 ............................ CTCAAAGGTAAACGGCTAACAGGTTCATTTGGT 2249853 28 100.0 32 ............................ ATAAAAATGCATCACGTGCATTCGGTACAGCT 2249793 28 100.0 32 ............................ TAAACCAATCGGCATGATCGATATACCTATTT 2249733 28 100.0 32 ............................ TCATTAAATCCGGACCACTCCCATTGATTGTT 2249673 28 100.0 32 ............................ ATTAGGGGTGGCGGCATTTTAATTTCAGCTTC 2249613 28 100.0 32 ............................ AATGATTCACGTCATTAATTCGCGCTGTATTT 2249553 28 100.0 32 ............................ ATTCAGTGTGTCATTGGCAGAACCACCTAATA 2249493 28 100.0 32 ............................ TGGAGTAGCTGAAATTAAAGTAATCATGTTGT 2249433 28 100.0 32 ............................ AGCACTCACTTAAACAGCTTTTGAGCTACGTT 2249373 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 16 28 100.0 32 GTTCACTGCCATGTAGGCAGCTTAGAAA # Left flank : TTGGATATCCGAAAATGGCTAGAACGTTTAGAAGATTATGTACATATTACTTCTATCCGTGAAGTACCTAGCGAAATCAAAGGCTACGCAGTTTATAAACGTAAACAAGTTAAAACCAATGTACAGCGTTTGGCTCGTCACCGTGTAAAACGTGGTGATATTGGCTTTGATGAAGCACTTGCTCGATATAGCAATGTGGTGACAACAACCAACTTGCCGTATATCGAAATGAAAAGTTTAAGTACGTCTGATCAGCAAAGTGAAAAACGTTTTAAATTATTTATCGAAAAGCAATCTGCTGATAAATCTGAAAATCAGGTTTTTAGCACTTATGGATTAAGTTCCGAATCATCGGTACCCGAATTTTAACCCAATATTTTTTTACTCTTTAACAGCTTAATAAAATCAATAAGTTATGATAGTGGTTTAAACCTTGGGTCTTTTTATAGATTTAAGGGTTAAACTGCTGTTATAGCTTTATTTTTTGCTATAAAATTACT # Right flank : TATCACAAAGGTACTACCTACAACTCCTAACCTAATTATTTACAGATAACTAAATTTTCAAACATAAAAAAGCCCTAACACGAATTAGGGCCAATTTATGCAAGCTTTGGGTTTAAGTTTTAAACCGCTTCAGCTTCTAAAATTTCAAAATCATGGGTAATTTCTACGCCACCGTCCATGAGCATTTTGCTCGCAGAACAATATTTTTCAGCAGAAAGCTCAACCGCTTTCGCCACTTGCTTTTCTTTTACACCTTTACCTGTAACTACAAAGTGCAAATGAATTTTGGTAAATACAGCAGGAATTGTGTCTGCACGTTCAGCGCTTAAGTCACAACGAACGGCTGTAATATCTTGGCGTGCTTTCTTTAAAATGGTCACAATATCAAAAGAAGCGCAACCACCAAGGCCATTCAAAATCAATTCCATTGGACGCGGACCGCGATTTTCACCGCCGTATTCTGCCGAACCATCCATGATTATGCTATGACCGCTCTGAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCATGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCATGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.40,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.5 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //