Array 1 122392-126631 **** Predicted by CRISPRDetect 2.4 *** >NZ_POUM01000010.1 Pseudomonas stutzeri strain CCUG 44592 NODE_10_length_202269_cov_24.0963, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 122392 29 100.0 32 ............................. ACGGCTGCGTAGACGCAACAGCGCCACCTGTG 122453 29 100.0 32 ............................. CAGCGAGGGAGGCTGGGGGTCAGTCCTCATTG 122514 29 100.0 32 ............................. GTGACCGCAATGGACATTGTTTCCATATCCGA 122575 29 100.0 32 ............................. TCTGCCGTGAAGACCCACGCAGCCCGTCTCAA 122636 29 100.0 32 ............................. TGCGTAGCCCGCGCAGGCGTCGGAATACTCAC 122697 29 100.0 32 ............................. GTCTGGTTGTCGGGTTACCGGTGTGCTCAGCA 122758 29 100.0 32 ............................. TGGATACGGTCATCCTTGATCGAGCAGGAAAC 122819 29 100.0 32 ............................. TACCGGGAGCCGACGCACGCGTATCTCGAGCA 122880 29 100.0 32 ............................. ACGGAATGCAACCCTTTTTGTATTGGTTAACC 122941 29 100.0 32 ............................. GAGCTCGATCAGCAGCGGTTCACTTGCTAGAG 123002 29 100.0 32 ............................. TCTCACCATGAGACAAGAGTCCACCATTAGAG 123063 29 100.0 32 ............................. TGTTCAGTACCGTTTTTTGCTACAGATCCGCG 123124 29 100.0 32 ............................. CATTGCGATAATGGCAGCCGGAACAGCATGGA 123185 29 100.0 32 ............................. TCCCAATGCTCGAGGTCGAGCACGATGCGCTT 123246 29 100.0 32 ............................. AAAGAGGCGCCCAAGGGCAACCCCTTCGCGGA 123307 29 100.0 32 ............................. GCAACGCGCTCAAGTACCGGTTGCGGGCTGGT 123368 29 100.0 32 ............................. CCGGTGCTGCGTGGTTAGCCAGTTGTACAGCT 123429 29 100.0 32 ............................. CCGGGCACGAGCCCTGGAACTGCGGCACGAAC 123490 29 100.0 32 ............................. GTAATCACGCTCATAACGTAGATTCCCAGACA 123551 29 100.0 32 ............................. TTGTGCGGTGCAATCCACTGTTTTGTTACTCC 123612 29 100.0 32 ............................. TTTTTGTACTGGACGGGTTGGCGCATCACGGA 123673 29 100.0 32 ............................. GCCCCGGTGAGCGGCAACTCACCAGGGCCTGA 123734 29 100.0 32 ............................. CGATGAACCACTTCGACGATGACGAACCCAGC 123795 29 100.0 32 ............................. AAGGACGGCATCCAGCTGCTGCCGGTGAGCGA 123856 29 100.0 32 ............................. CACGAAATTCAGGCCGGGACATTCAGCTACGC 123917 29 100.0 32 ............................. GCGGGCTGCTCATCAAGTTTGACGAGGAAGGT 123978 29 100.0 32 ............................. AAAATCTTCTGGGATGACCTGAAAGCGTTCAC 124039 29 100.0 32 ............................. TTCGACTAGGCGCTCCGGAACGTCGTCGCCCA 124100 29 100.0 32 ............................. TCCTCGATGGATGGCCATGAGAGCAAAATCAA 124161 29 100.0 32 ............................. TGGATCAGCAACGACGCGGCCGACATGACCAG 124222 29 100.0 32 ............................. TAGGTAATCGAATTACCTGAAACGCTGGTCAG 124283 29 100.0 32 ............................. ATGTGCGCCTGATTCTTCGACGCAGACAGGAA 124344 29 100.0 32 ............................. GCATGGAAGAAGCACGTGCCCACCTGGCCCGT 124405 29 100.0 32 ............................. CACAGCCCCCAGGATGGCGATGTGTTCGAGCT 124466 29 100.0 32 ............................. CTACAACGTTGGCGAGTTCGGCCTATTCAGCG 124527 29 100.0 32 ............................. GCAAAAAGCTGCAGGACGAGAAGCAGCCCCTA 124588 29 100.0 32 ............................. GCAGAGGACGAGATCGACCCGTTCACGAAAGA 124649 29 100.0 32 ............................. CCTTTGCGCATCTGCCGGGTGTCCCGTATCCA 124710 29 100.0 32 ............................. GTTGCGCGCCTCTATCGGGGTGCGACTGGGCA 124771 29 100.0 32 ............................. TAGGAAAGAAGTTGATCGGCGGCATTCAGGAC 124832 29 100.0 32 ............................. CCGCGCAGCTTCTCGGCGATGGCCACCAGCTC 124893 29 100.0 32 ............................. CAGCCGGCGTAACGGTGAGGGGGTGAGGGATG 124954 29 100.0 32 ............................. CTGTACCGGGTGATCCTTCAGCTCATACCAGC 125015 29 100.0 32 ............................. TTGGTACGCCGCCCCGCGCACCTCCTTTGCAA 125076 29 100.0 32 ............................. TTTGTGGTAACCAAGTCTCGCTTCCGCATGGA 125137 29 100.0 32 ............................. CCACCTACGCAGCCGACACCTACGTCGATGTT 125198 29 100.0 32 ............................. AGTCAAAGGAAGTGCCAGAGGCCGTCTTTGCC 125259 29 100.0 32 ............................. ACGGCCGTCCAGGCTGCCGAGCGCGTCATCAC 125320 29 100.0 33 ............................. AACTACGGCTTGGCGTTCAGCGTGGCAAATGGG 125382 29 100.0 32 ............................. GGTATGAGTCATGGGTGGAAAGCGGAGCGGGG 125443 29 100.0 32 ............................. TTTGCCGAGCTGCTGGACGAGCCTGTCGAATA 125504 29 100.0 32 ............................. ATATCGACCTGACCACGCAGGCCGGGCAGGAA 125565 29 100.0 32 ............................. GAACCCCCGGCGACTGACCCGAAGTGGTTGGA 125626 29 100.0 32 ............................. GCTTGGACCGCAGCGGATGACGCGCAACTGGT 125687 29 100.0 32 ............................. CGGGAGGCAGCATGAGTTTCGCAGAGAGCAAG 125748 29 100.0 32 ............................. GCAGCCATTCGGTTGCACGCCCTCGGCATCAG 125809 29 100.0 32 ............................. CCGAACGCCGCGAACATGGCGCGATTGCCGCC 125870 29 100.0 33 ............................. CCGTGGGGCGTCTACGCGCTTGCCCAATACCAC 125932 29 100.0 32 ............................. GCGAGGCTCGCGCTCACCTTCGTAGAAGCCGA 125993 29 100.0 32 ............................. GCTAGTATCGGACCGACCGGGTGTTCCCTCTA 126054 29 100.0 32 ............................. GCGCGACCAGATCAAAGGGAAGGTCGCGCACC 126115 29 96.6 32 ......................G...... GCTGACGAAGAGCTAGAGGCGCGCTTCCATGA 126176 29 100.0 32 ............................. AACACCGAGACCCCGCAATGCGGGGTTTTTTT 126237 29 100.0 32 ............................. CTACCAAACATCCGCGCCGTGTCGGGTAAACG 126298 29 100.0 32 ............................. AACACCGAGACCCCGCAATGCGGGGTTTTTTT 126359 29 100.0 32 ............................. GCAGAGGACGAGATCGACCCGTTCACGAAAGA 126420 29 100.0 32 ............................. GTTGCGCGCCTCTATCGGGGTGCGACTGGGCA 126481 29 100.0 32 ............................. TAGGAAAGAAGTTGATCGGCGGCATTCAGGAC 126542 29 100.0 32 ............................. CCGCGCAGCTTCTCGGCGATGGCCACCAGCTC 126603 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 70 29 100.0 32 GCGTTCCCCGCGCCCGCGGGGATGAACCG # Left flank : GGCGTATCATCCCGTTGATCGAAGAAGTTTTGTCAGCCGGTGGGATCGCCCCGCCGCAGGCCCCAGCCGAATCGGTACCGCCCGCCATTCCCAACCCGCAAGGTCACGGCGATGCCGGACACAGGACCAAGTAGATGAGCTTTCTTGTGGTGGTCACCGAGGATGTTCCGCCACGGCTGCGGGGGCGGCTGGCCATCTGGCTGCTGGAAGTGCGGGCCGGTGTCTACATTGGCGACGTGTCCCGACGCACCCGGGAAATGATCTGGCAGCAACTGGAGGCAGGCTACGAGGACGGCAGCGTGGTGATGGCCTGGGCCAGCGCGAGCGAATCCGGTTACGACTTCCAGACCCTTGGCGCCAACCGCCGAGAACCTATCGACTATGACGGACTTCGTCTGGTCGCTTTTCTCCCTCCAACAGAACGCGCTCTTTAACAAAGAAAAATCGGTAGCTTTTTCGTAGCCGATTTTCTCTTTTCGGAACAATCGGTTACGTTTAGT # Right flank : GCCGAACATGTCCGCAACACCGGGATCGCCACGGCTCCCCTGTAATACGCGGGCAATCGTGCCCGTGGAGGCTGCAAACGGATTGCTGATGCGGACGGGGCGCTACAAGCGACACTGTTTGAATACTGCATGCAGAACTCTGCGGTTCAAGTTTGTCGTGCTCCAGGCGACAACCTGGCATTGCCCAGAGGTTCTCCATGACGCTGCCCATAGTCGCCTCCGCCGCTTCCGTCGCAGCCGCACGTCAGACCGTGCGTACCGCGGTGCCAGCCCGATCTGCGGCACAAGCGGAGCAGGCCTCCGAGTCACCTGCCCGGATGTCCCTCAGTGAGCGCTCACGGGAGCGACTGCTTTCGGCCGCCAAGGCCACTCGCTCGTTTTCCGCTGCGCTGCGCGAGGCCGATAGCGCGAAGAAGGAAGCGGCGCGGCGACGCATCGAGGACATCAAAGAGCGCATCAAGATGCTGCGGATGCTGGTCAGCGGCGGGCTGGCATCGAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCGCCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCGCCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //