Array 1 823154-820676 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP069278.1 Bifidobacterium longum strain HN001 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 823153 36 100.0 29 .................................... GTTGGGGAACAGGTGATGGAACAGCTCTG 823088 36 100.0 28 .................................... GCGTGCGGATTGTTGCCCTCCCTGTCCT 823024 36 100.0 29 .................................... CCAAAGGGGAAACATGTCGATGAAGGAGT 822959 36 100.0 28 .................................... ACGGTCATGGTGTCAAGCCCCGTGGCCT 822895 36 100.0 28 .................................... TTAAGCCGATTGAGGAGGAGTTGGGACC 822831 36 100.0 28 .................................... CCGCCCTGACGCTCATCCTCGCGGTCAT 822767 36 100.0 29 .................................... GTTCAGTCAAACTGTACGCTATAGTGAAG 822702 36 100.0 28 .................................... AGACCCTGAAGGGCATGAGGAAGGGCCT 822638 36 100.0 28 .................................... AGGAACTGGACGTACCCGGCGAGCCGTT 822574 36 100.0 28 .................................... TCGGACGGCTGGCCTCGTTTCTCCATCT 822510 36 100.0 28 .................................... GAGGCCCGCGACCTGATTTCCAGCGGCG 822446 36 100.0 28 .................................... GCCTCATGATGAAGAGTCGCAAATCATC 822382 36 100.0 29 .................................... GTGAGCTTGTCCGTGTCTTTCATCAGTGG 822317 36 100.0 28 .................................... TGTTTACGCTCAAAAAGCACATTAGATT 822253 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 822189 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 822125 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 822061 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 821997 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 821933 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 821869 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 821805 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 821741 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 821676 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 821612 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 821548 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 821483 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 821419 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 821355 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 821291 36 100.0 29 .................................... ACGCGGCGAAGAATCTTGTTATCGCGGCT 821226 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 821161 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 821096 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 821032 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 820967 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 820903 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 820839 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 820775 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 820711 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 39 36 99.6 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTACGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCAGGCTTGTCGGTTCAACTGAATATCTTTAAACTATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //