Array 1 210-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLHE01000337.1 Acinetobacter baumannii strain AS012671 AS012671_337, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 209 30 100.0 30 .............................. ATCCGCCTCTTGAATGTCCAGATATTGGCT 149 30 93.3 30 ............................AC CACCTGCATGACGATCTACATCGGCATACA 89 30 96.7 30 ............................A. ACTGAAATTGTTGTGAAGCGTTACCAACGT 29 29 96.7 0 .............................- | ========== ====== ====== ====== ============================== ============================== ================== 4 30 96.7 30 GTTCATGGCGGCATACGCCATTTAGAAATG # Left flank : AAA # Right flank : T # Questionable array : NO Score: 5.39 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 5233-5561 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLHE01000026.1 Acinetobacter baumannii strain AS012671 AS012671_26, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 5233 27 85.7 32 TAA...-..................... TGCTCCTGACGAGCTAAGACGGCGCGGCCACT CC [5238] 5294 28 100.0 32 ............................ ATTGAAGAAATCAGGAAGAATGCTCCAGAGGG 5354 28 100.0 32 ............................ AAACTAAAAATACAAATCAGTTGTTTTGATAT 5414 28 100.0 32 ............................ TCATAGATAAATAGACAAAAGGGGCCGTTAAG 5474 28 100.0 32 ............................ ATTGGATGCCATTACCCAATCCACCAAAAGCA 5534 28 89.3 0 ..........A.G..............G | ========== ====== ====== ====== ============================ ================================ ================== 6 28 95.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : AGCGTTTCAGTCTGGACAAGTGCCGGTATTTTTAATCAGTCTGAAAGCAGGAGGGGTCGGTCTGAATCTAACTGCCGCAGATACGGTCATTCACTATGATCCATGGTGGAACCCTGCTGCTGAAGATCAAGCTTCAGATCGTGCATGGCGGATTGGACAGGACAAGCCGGTATTTGTCTATAAGCTGATTACTAATAAAAGCATAGAAGAAAAAATTCTTGCCTTACAGCAAAATAAAGCAGAACTGGCACACTCTATTCTAAGTACAGATCATGAAGGCGAAGTGAAACTGACGGAAAATGACGTGATGAACTTGTTTGAGAAATTTTAGTTTGGTTTCAGATTACCCTAATCATCTGTAAGTATCTGAAAGTCTGGATGCAATTTTTTCCAATGTTCTCTTAATTTTTCTTTATGAACAGAAATCATAGGTAAGTCTAGTAATAGCACTGGCCATACTGACCGTGCTTTGTCCATGATCGCGTGAAGTTGTTTTTCAA # Right flank : GTATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTAATTCGTCGGTCATCCCAATAACACGGCACTACAATCAAATGGTTCTCATGTAACCGTGACCATAATCGGACACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATCAGTAAGGTAGATTTCATATTGTCATAACGACTATATAGAACCTTATGTACCATCTCTAAGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACCAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTCTACTGTTATGCAGAATGTTGCGAATAATTGATGCACTCAGATGGGTTTTAC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 577-66 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLHE01000064.1 Acinetobacter baumannii strain AS012671 AS012671_64, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 576 30 93.3 30 ............................AC GACGTTTGATGCAGTACGACAATGCAGTAA 516 30 93.3 30 ............................GC CTATTCAATCTGGTTGTTCTAACAATGCAA 456 30 93.3 30 ............................CG TCAAGACAATCAAAAAAGCAATGAGTACAA 396 30 96.7 30 ............................A. ACATCTTTATCAGTATGACGAACCTTAGAC 336 30 100.0 31 .............................. TGGCTGCAAGCGGGACCATAATCCATGCAGC 275 30 100.0 30 .............................. TCTGGGAGATTTTGAGAGAGGGCACACTGC 215 30 100.0 30 .............................. CAGGACATTGATCAGGTACTGATTTGATAA 155 30 96.7 30 ............................A. TATCGCTTTCATTTTAAAGACGAATATCAA 95 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== =============================== ================== 9 30 97.0 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATT # Right flank : TCATGAACTAATTTAAAAGCAACATTAGTAAGTGAACCGTACCGGGTTTGTCGGAGACTTTTTTAT # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.81, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 6-815 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLHE01000066.1 Acinetobacter baumannii strain AS012671 AS012671_66, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================== ================== 6 30 93.3 30 ............................TA AACGTTCAAAAGCTAAAACAACAGCTGAAG 66 30 93.3 30 ............................TA CAAACACAGCTTTAGCAGCAACAGAGTTAC 126 30 93.3 30 ............................GT TGGCAGTAAATCGCATGACATTGCGTTATG 186 30 96.7 30 .............................G CAAATGGCAACCAACTACCTGCTTCATCAT 246 30 96.7 30 .............................G ATGTTGAATTGTATAACATGGATGCGTTTA 306 30 100.0 30 .............................. TTTGGAATTCGTTTATGCAATTCGCGCATT 366 30 93.3 30 ............................CG CAAGGGGCTTTTTAGTGCCTAGCTGCTCGA 426 30 93.3 30 ............................TT CGGCACCACCCAGAGTAACTTTACCTTTAG 486 30 100.0 30 .............................. AGGAAGTTAAGGACATTGAACAGGCAATGG 546 30 96.7 30 ............................T. AAGGCGATCCACCTCCCGTCACAGTCATTT 606 30 86.7 30 ...........T.C..............TT TGCTAAAAGGATTTATGCTTTAAAATACTT 666 30 83.3 30 .......A.....C...T..........GT TGGCGTACGGATAACGGAAGAAAGCATAAG 726 30 90.0 30 .......A.........T...........A ATAACCACGGTTGTGGTAAGTCACTTTTAC 786 30 83.3 0 .......A.A.....T.T..........G. | ========== ====== ====== ====== ============================== ============================== ================== 14 30 92.8 30 GTTCATGGCGGCATACGCCATTTAGAAAAC # Left flank : AACGTG # Right flank : CGTTCAGGTTGAGGAGATGAAGTGATGTGATGTTTATGACGGTTTACGTCACTTAAGCGTTAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAA # Questionable array : NO Score: 5.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.24, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [5.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 36-3609 **** Predicted by CRISPRDetect 2.4 *** >NZ_VLHE01000075.1 Acinetobacter baumannii strain AS012671 AS012671_75, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 36 30 96.7 30 ............................G. GCCTGTAGCAAAAGCAAAAGATTTAGCATT 96 30 96.7 31 ............................G. AGCAGTAACCAAAAAAAACCGTTCAGGGGAA 157 30 100.0 30 .............................. CTTAGCTGATCTGCGGATAGTTGCCACAGT 217 30 93.3 30 ............................AG TTATAGGCATAGAGTGCATGGGGCATGTTG 277 30 96.7 30 ............................A. AAGGAAAGGGTAGGCGTTCAGACCGTAAAG 337 30 96.7 29 ............................G. ATGAAACTAAAAGCTATGCTCAATTAAAG 397 30 93.3 30 ............................AA GATCAGGGGCAACGAAAACAAGGATACCCG 457 30 100.0 29 .............................. TACCCGATGCAGGCTGACCGCCAGTAATG 517 30 100.0 30 .............................. TCTTAGCAAATAAACTTGCGTAAGTTCCGT 577 30 93.3 30 ............................AG TAAAGAACAACTTTCTTTAGAGTTGCCTAT 637 30 100.0 30 .............................. AACTGAACTTTGCTATCAAAAAGTTTTAGT 697 30 100.0 30 .............................. TAACTTTCAGGTCTGCCAACTCTGCTTTTC 757 30 96.7 29 .............................A ACCCGATTAATCCCTATGACTGGCGAAAG 817 30 93.3 30 ............................AG TACGCAAAGCTTTAAATCATGGTTTGGTAA 877 30 100.0 30 .............................. AATACTTCAATTGCACCGAAAGCTTTTTCA 937 30 93.3 30 ............................AC TAAGCGTTCCATCTCGTACCGCAACTTAGC 997 30 93.3 30 ............................AG ACGAAGGACATTTAGTCGGAGGATCAGGAA 1057 30 96.7 31 .............................G AAAGAAGGTCCTGACAAGTTAGAAAATGAGA 1118 30 100.0 30 .............................. GTAGTTCATCTGCCTAGCTCCACCATGTTC 1178 30 93.3 30 ............................CA ACATACCACTACATAAGCCCTTGTATATAT 1238 30 100.0 30 .............................. TGATTTACACAGCGGGCTGATGCGGTTTTC 1298 30 93.3 30 ............................AG TTATTAATATCTTTGCGTGCAAGATTACGC 1358 30 93.3 30 ............................GA AACGACATTCAGTTCTATCCCTTTTAATTC 1418 30 93.3 30 ............................AA ATGGTGGTTCATTGTGTCAGTTCTCTATAG 1478 30 100.0 30 .............................. TTATCGATGCGGAGACAAAACCATGCGCGG 1538 30 96.7 30 .............................G GAATGAACTTGATGTACAAGATCGTGAATT 1598 30 100.0 30 .............................. TTGCGTCATATCACGTTGAAGTTGATGAAA 1658 30 96.7 30 .............................G TCATGGCAATCGCGATACTTAAGTTGTTTT 1718 30 93.3 30 ............................AA TAACTCAGGCTTTAAGTCATTAGCCATATT 1778 30 96.7 30 ............................A. CTTCCATAAGTTTACGGCAATCAGATTGGC 1838 30 100.0 30 .............................. GTTATTCATATTTTTGTAGCTGGTGCAATA 1898 30 96.7 30 ............................A. CAAAGTGCAGAGATGAAGAAGTATTTTTAC 1958 30 93.3 30 ............................AC CAAACGCTTTAGCCTTGATATGGTCAACGT 2018 30 96.7 29 .............................A CGCGATCCGACAAAAAGAAATGCTGAATT 2078 30 93.3 30 ............................GA GCCAAAAATGTTATGACCCTGCATAATCTT 2138 30 96.7 30 .............................G CTCCAGACGATTGGCGTGATACTCCGGATG 2198 30 93.3 30 ............................AA TCGTCTGGAGCAGGTTCAACTTCAGGTATT 2258 30 100.0 30 .............................. AGCAAAGCGTGATTCAGGTTCTTGATACCA 2318 30 100.0 30 .............................. TGGATTGTTTAAAAAACCTAAATGAGTTAT 2378 30 93.3 31 ............................CG CGAAAACAAGAACAGTTACTAAGATTGCTAT 2439 30 100.0 30 .............................. GATCAATCAACTTCTTACAGTCTGATTGGC 2499 30 93.3 30 ............................AG ACGTATATATGGACGTTCTGCAAAGTCTTT 2559 30 96.7 30 .............................A ACGGAATCAAAATTGCAGCAGCAGCTACAG 2619 30 93.3 30 ............................AG AAACGGGCAGAAGTTTCAGGACCTGTGGAA 2679 30 100.0 30 .............................. AAAAATGTAAATAAACTGATGGCTGGCTTA 2739 30 96.7 30 ............................C. TGTCGCTTCACGCGCACCTGTGCCCTGTAT 2799 30 96.7 30 .............................G CTTCAGCAGCGCAGACTCTCAGGAACTGAT 2859 30 93.3 30 ............................CA TTGGTGGCAATTGATCTTTTAAGCTGATCA 2919 30 96.7 30 ............................A. TCTAACAAGTGAATATAAAGAACTCACAAA 2979 30 96.7 30 .............................G AGCTGTGCATTTACGTTCAAACTGATAATT 3039 30 100.0 30 .............................. TAAGAACAATTCCAACAAGAGACAGATTTG 3099 30 93.3 30 ............................AC AAAATCCAATCGATCACGACGGCTTTTCAA 3159 30 96.7 30 ............................A. GAAGGTCGTACTTATCCTTATGTTGAACTT 3219 30 100.0 31 .............................. ACAAAATTTAAGCAACTTTTGCTTATCTTCA 3280 30 100.0 30 .............................. GTTGTCATGCAAGTTCTGCAAAAATGCCTT 3340 30 96.7 30 .............................A CGTTTTATAGACATTTATCTGAACTTTGCG 3400 30 93.3 30 ............................AA TGTATGTTTATTTTGATGCAGGCGGTAAAA 3460 30 93.3 30 ............................AA CGAGAAATTGGAACTACAAAAGAACCAAAA 3520 30 96.7 30 ............................C. ACAAGTTACCCTTAGAAGATGAGGGTAAAA 3580 30 96.7 0 .............................G | ========== ====== ====== ====== ============================== =============================== ================== 60 30 96.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : ATATTGACTCTCCGACAAACCCGGTACGGTTCAAAG # Right flank : A # Questionable array : NO Score: 5.46 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.38, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [31.7-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //