Array 1 120076-119118 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FBLH01000040.1 Campylobacter coli isolate SWAN361, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    120075	    36	 100.0	    30	....................................	TTATGATATTTAACTATATCGCTCATTTGC	
    120009	    36	 100.0	    30	....................................	TGCGATAATCGGGGTGCGGGGGCGTGAAGT	
    119943	    36	 100.0	    30	....................................	CAAGCTCATGCAAACGAAGATGAAAGCGAA	
    119877	    36	 100.0	    30	....................................	ATTGCAGGCTGACTTAACCTTTTTTGCTTA	
    119811	    36	 100.0	    29	....................................	TGTGTATTCTGTAATGTAATGTGCCTCAT 	
    119746	    36	 100.0	    30	....................................	CTCGTATTCGTGTCGTGGCAATCTTTTTTC	
    119680	    36	 100.0	    30	....................................	TTTGATATATTGATTTGCAACTTCTGCTTT	
    119614	    36	 100.0	    30	....................................	AATGAAAATACTCTATCATCAACCCAGGAA	
    119548	    36	 100.0	    29	....................................	AGAAAATCTACGCTTGAAAGTTTTTCCCT 	
    119483	    36	 100.0	    30	....................................	AGAATCATTCAAAATTCTTTTTATATTAGT	
    119417	    36	 100.0	    30	....................................	CTTTTCTACTTGGATAAACAAAAAGTTTTA	
    119351	    36	 100.0	    30	....................................	TCTTCCAAAACTATTAACACTGTTGCTAAA	
    119285	    36	 100.0	    30	....................................	TTAATAAAATCATCATCCACAGTCTTTTTT	
    119219	    36	 100.0	    30	....................................	CTGTTACTGATATATTACTTGCCATTTTAA	
    119153	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        15	    36	 100.0	    30	GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT	                              	       

# Left flank :   AAGACCATTACAAGCTTCTTTTATATCTAATTCACAAGCTTTTTCATAGTATTGTTTAGCTTTAGAATAATTACCTTGTTTATGTTGTTCTTTTCCAAGATCAAAATAATTATCATTTGAATAAACGCAAACAGGTATTAAAGTAAATACAAATATGAAATATTTCATCACCATCAATTTTCCTTTTAAAGCTATATTATTTGAAATTTTTATATTCTTTACAATCATATTCATCTCCTAATTCACAAGATTTTTCATAATTAATTCTTGCTGTATGGCAATCTCTTTCGATGTACTTACACTTCTTTAATAAAATAACCATCGTTCGAAAATACATTTGTTGTTAATAAAATTAAGAACTAATATATTTAATTTTATTTGTTGCCTTTTATAATTAATTGTTAATTATAGCATAAATTATAATTTACAATTGATAATATGTTATGTAAAAATTAAAGTTTGAAAAAATTTATTTTTTCAAATTCCAAAAGCGACATATT
# Right flank :  AGACTTTGAACAAATAAAGAAAAATAGAGCTTTTTGTATACAAAAATGTATAAAAATATGCTATCATTTTAAAAGAGAAATTTAAAAAGAGACTAAAATAAGTGGTTTTCGGTTAGCCACGCAGGGTTACAATCCCTTTAAAACCGTTAAAATTCAAACAAACTAGCCTGTCTAATTTTATTAGACTTAGTTTTATTTTCTTTACATATCTTGTCATTGCTGTATTTAAAATCTTGTGTTTTTTCATCGTATTCAAAAAGAACTAAATTTTTATCATCATTCATTTTTTCATTAAAAGTAACTCCACCTAAAAGTATTTGCATATTGTCAAATTGTTTTTCGGTTATGGTTAATACTCTTATATTGCCACAAGGAGGTAAAATTCTTTCTACGGATTTGATTGCTGTTTTAGCCGAAGTCATTCCTTTACAAATTTTAACATATACGCTAAATTGCATCATAAAAAAGCCAAGTTTTACAAGCGAAACTCTAAATTTATT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTCTCTTTTTAAATTTCTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:80.56%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTCCCTTTTTAAATTTCTTTATGGTAAAAT with 98% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.5   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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