Array 1 123318-122110 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMRZ010000002.1 Enterococcus durans strain 8L1-82 contig00002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================================================================ ================== 123317 36 100.0 30 .................................... TGTTCCATTCATGAAACTTTGTAGTGACGA 123251 36 100.0 30 .................................... AAAAAAAGGAATCAATCTCCCGCCAAAATA 123185 36 100.0 30 .................................... GATGAGTTGATTACAGTCAAAGTATCAGAT 123119 36 100.0 30 .................................... AAAAAACAGAGTCAAATACTCGAAATATCG 123053 36 100.0 30 .................................... AATATTTATTGAAACATCCATTTAATAGTT 122987 36 100.0 30 .................................... CTACTTTAGTCGCTTGGCAATCTAATAAAA 122921 36 100.0 30 .................................... TGAAGTTTTCTTCAATACGACAACGGCTCG 122855 36 100.0 30 .................................... ATCATGGAATGACATGGTACAAACTTATAT 122789 36 100.0 30 .................................... TAACGGTTCAACTTCTGCCGCCGCTGATAT 122723 36 100.0 30 .................................... TTTCAAGTGCTAATACAATGATAGCAGATT 122657 36 100.0 29 .................................... CTCGTAGACTATACTCTAACTCGTAAACA 122592 36 100.0 30 .................................... ATGTGTTTGCTACAATTCCTCGTGTGCTTG 122526 36 100.0 30 .................................... AGCAACACAAGATGAAATGGACCGTATGGC 122460 36 100.0 30 .................................... TAAACGGTGGCTTTTGGTTGTTCACTAACA 122394 36 100.0 30 .................................... CTTTGACCGCTTGTGATCCAAAAAATACAA 122328 36 100.0 29 .................................... AACTGATGATAGTTCTCAAACGTTTTTAG 122263 36 94.4 80 AG.................................. ATTGTTGACCCTCGCATCGACCACTTCATTGTTTTGAATGCTTCCAAAACTAAAGACGTAATCACTGTCCTTGGGATTCT 122147 36 91.7 0 ..........................T......C.T | TG [122113] ========== ====== ====== ====== ==================================== ================================================================================ ================== 18 36 99.2 33 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : AAGCAAACCGAAAGATCATGGTAAAGGAAACCAAATCGAAGGACGTATTTTTGAAGGGCAAAAAATGGTCGTGATCGAAGATCTGATTTCAACTGGCGGAAGTGTACTAGAAGCAGCAGAAGCTGCTAAACGTGAAGGGGCGAATGTTTTAGGTGTGGCTGCTATCTTCACGTATGAATTACCAAAAGGAAAAGCAAACTTTGCTAATGCGGAAATGCCATTATTGACCCTTACGAATTATTCCGTGCTGATTGAAGCAGCACTTGAAGAAAAATACATTGATGAAACAGAATTAAACCTATTGAAGGAATGGAAACAAGATCCTGAAAACTGGAAGAAAAACTGATTGCTTAACATCTGTAAAAAATATTTTTAGCATCAGAAATAAAATGGTATACTAGTGTTAAATAAACAACAAATAAAGAAGTATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCTCGGTGATAAATCACGTAGAAAAATTTTTTTCTACGAG # Right flank : CAACTGTTTTTGAGTAGTGTTATTTGAAAATACGATATACGAGTGGTAGAGACTAGAATGCTTTCTTCTGGTTTCTATTTTTTTATATAAATCGGGAATGATTTTGTTAAAATTATAAAAAAATCAATGAAAATAAAACGTGTTATTTGCAAATTTTAGTTATTTAATGGTAGGATTATCGGAAAAAGTATTCCATTAAGGGAGGTCTATTTATGGGATTGAATGAATTTATTTTAGGATTGAACAACTTAGAAAAAATCACTCGGGCTCCTGGTTTCTTTAAATTCACCGAGCATACGGTAGCGGCACACTCGTATCGAGTGGCTTCGATTGCTCAAGTTTTAGGGGATATCGAAGAAGTAAATGGTCAAAAGATCGACTGGAAACTGCTCTATGAAAAGGCACTGAACCATGATTATACCGAGCGCTTCATTGGTGACATCAAAACTCCAGTAAAATATGCAAGTAAAGAGTTGCGGGGGATGTTGCAAACGGTAGAA # Questionable array : NO Score: 6.02 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.19, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 77994-77630 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAMRZ010000008.1 Enterococcus durans strain 8L1-82 contig00008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 77993 36 100.0 30 .................................... AAGAATATGAAGCGACTGTCCAACGTCCAG 77927 36 100.0 30 .................................... CTTGAACTTTCAATTGATCCTGCTTTGGCT 77861 36 100.0 30 .................................... ACAAGACCAAGTAAATGAAGCTTTAGACTA 77795 36 100.0 30 .................................... ACTTTCCAAAACAAGATAACCGCTTTGCAC 77729 36 100.0 30 .................................... GAAGCATCTGGTATGTTTAAAATCCTCATT 77663 34 86.1 0 ..........................--..T...TA | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 97.7 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GTTGAAGTAAAATCAATGATCGACAAATTGACCACTACGATCAGCGAATTGATCGACTACGAGCTATTGGATCATGAATTGGATTTGGAAAGTGATGAAATCACGGTATTAGAGCTGTTTAAAGCACTTGGTGTAAAAATTGAAACGCACAGTGATACCATCTTTGAGAAAATGTTGGAGATATTGCAAGTATACAAATATCTCTCTAAAAAGAAATTACTAGTTTTCGTCAATACATGCGCTTATTTTACGTTAAAGGAGCTATTGGAGATACAAAATTACATCTCTTTGTACAACATGGATGTTTTATTTCTTGAACCACGTAAAATTGAGGGAGTCCCTCAAAGAGTTTTAGATAAAGACTATTTTTTGACATAAAAACTATGCTAAAATGAACTTAAGAACGAATGACTTGAAGCAGTCATTCAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGTTCGGTGATAAATCACGTAGAAAAAATTTTCTGCGAG # Right flank : ATGAAGAATAGATGACCGAGGGGTTGTTTATTCTTTTTTTCATATAATTGGACGGCGATGCTTTCTGTTAGTAACATAAAGGAGAAGGGTGGTTGGGGATATGTTTGATTCAACGTTGATGGTTTGCTTGGATTGGCTGATGACGATTTTAAATCTTGCTTCGATCATTATTTTAGTGGTCGGTGTTTTTTTAGTATTAAAAACGTTGTTTGATTGGCGGACTTTGAAGAAAGATTATGGACAGCGAAATAGTCGCAATGCAGAGATTCGCAAATTGTTGGCTAGTTATATTTTATTAAGTTTAGAAGTTTTAGTGGTGGCAGATATCATTGAATCTGTCATCAAACCAACTTGGACAGATATTTTAAAACTTGCTTTGATTATTTTGATCCGTACGATCATTTCGTATTTCTTGAATTTAGAGATTGAAGAACAACAACGAGCGAAGGCGGGGATGACAGATGAAAGCTGAGATGATCGATGGATTGGCTCCTTATTTG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //