Array 1 1542992-1541012 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054559.1 Lactobacillus acidophilus strain LA-G80-111 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================== =================================== ================== 1542991 27 100.0 34 ........................... TAAGAGAAAACGGTGGTTTCCTCTTATTTTTATG 1542930 27 100.0 34 ........................... TAAATCCGGACAACGCTTGCCACCTACGTATTAG 1542869 27 100.0 34 ........................... TCATTGAGACACACATTGCGACGACTAAACTCTG 1542808 27 100.0 34 ........................... TTTTAATGAAAGGTGCTAGTTTTGTGACACTTTG 1542747 27 100.0 34 ........................... TGATTTTCCAGATTCGGCTACTATTTTGGCAGAG 1542686 27 100.0 34 ........................... CTTAGGCTATTCCGCACACAATATGTGGCGTGGG 1542625 27 96.3 34 ..............A............ TGACTGCAATGCAAGCAAGAGCGGACATAGCAAG 1542564 27 100.0 34 ........................... CGTCATAAATTAGCTTTCTGCCCTTTTGCGTCCG 1542503 27 100.0 34 ........................... TGCTGCTACGAGCGCTTTTGGTCACATTAAAGAG 1542442 27 100.0 34 ........................... TCATTGATGCACCGGTACTTAACTCAAATCAAAG 1542381 27 100.0 34 ........................... TGACTACGATATTTTCTTTTAATTATATCTTGGG 1542320 27 100.0 34 ........................... CAATATCATCAGCATTTTTCACACCAGAAAATAA 1542259 27 100.0 34 ........................... CGATTTGCGTGGCAAATGAATGGTTGATCTTGAA 1542198 27 100.0 34 ........................... TATTCTTTTTCACTATCAAAATCAAATATTTCTA 1542137 27 100.0 34 ........................... CACAAAAAAGCCACCTAGAAGATAAAATTCTTCA 1542076 27 100.0 35 ........................... CCTTAACTAGTGCAAATTTAATATTTGGATAGCTA 1542014 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1541953 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1541892 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1541831 27 100.0 34 ........................... CTTTGGCCATCTTCGGTCTTAAACTTAGCTAAAA 1541770 27 100.0 34 ........................... CGGGTAAACAAGTCAGAGTTACTCGCAGCAAATA 1541709 27 100.0 34 ........................... TTAGGCGAAACCCCGAGAGCAATTTCAAGCACGA 1541648 27 100.0 34 ........................... TAAAACGTTGAAGCTTATTGTCCGCTTTAACGTA 1541587 27 100.0 34 ........................... TGTTTACAACATCATGGTTAGAGCAAAACTTGTA 1541526 27 100.0 34 ........................... TGGGTACCGAGGGTGGCAATATCTTCCTTATTTA 1541465 27 100.0 34 ........................... TATATACATAGTTGTTTGTTTCAAAAATTGCCGA 1541404 27 100.0 34 ........................... CGGAATGTATGATAAAAATTGGCTATTTGCCTAA 1541343 27 100.0 34 ........................... TATTGATGCAACACCTAGCGCAAGTCAACCTGGA 1541282 27 100.0 34 ........................... CAGGGTGGTTTTAAGTACGAGATTGACTACGATA 1541221 27 100.0 34 ........................... TGGCGAGAAGCTTATGAAGATCCTAGGAAAAGGA 1541160 27 100.0 34 ........................... TATATGCGACTTATTTCTTACGATGAGATTCCAA 1541099 27 92.6 34 ...........A.A............. TCGATGGTAACTCTGTAGCTTTTAGAGCCTTTTA 1541038 27 74.1 0 ....T..T.T.A.A........A.C.. | ========== ====== ====== ====== =========================== =================================== ================== 33 27 98.9 34 TTTTCTCCACGTATGTGGAGGTGATCC # Left flank : CGTGGTTGTCTGCAGCAAAGGCTATCCAACGCACCCAGCACCTAATGTTAAGATCGGCAAGCTGCCTGAAGGTGCTAATACCTATATCGATTACGCCAATGTTAAAGGTGATTTGGAAAACTTGACGGGTGATGGTGGCCGCTTGTTCATGGTGATTTCGGAAGCTGACAATTTAGTTCAGGCACAAGACAATGTTTATTCTTATTTAAGTAAGCTTGATCTGCTGGATTGCTTCTACCGGCATGATATTGGTAATCGTGCTTTGGGAGATTTTAATATTATATAATGTCTTAACTTAATGACATTGATAAGGCTACCCATATTTTGTTTATTTGTAATCCTGTGAATATAATAGCAATTTAAAATTATTATATGAGCTAGATATATGTAGAAGAATATTTGATATAATTGTGTCGATGATTTGGTTGGGGAAATGCAAACTAAAGAAATTTTGCTTTTTAGTAAATTTAAAATAGCTTAACGATGGGATTCCTTTAGTG # Right flank : TGAAGCACAATATTTTTAAAATAATTGGGCAAGATTTTCTCCAAAAAAGTGGAGCTACATTAACGCAGTGAAGGAAAGATCACAAGAAAAAGTCCCTAATCAGGGCTTTTTTCTTTTCCAAAAACAACATGCTGAAATAGTGTACCGTAAACTGGTAAAATAGATAAGTAAACATAGATCAATTAATAAATAAGGGGGAATAAAATGGCAGATAAAAAATTACTTCTAATAGATGGAAATTCAGTTGCTTTTCGTGCCTTTTATGCTTTGTATCGGCAACTTGATCGCTTTACTAGTCCAGATGGGTTGCACACTAATGCGATTTTTACCTTTAAAAACATGTTGGATGCCATTCTTAAACAAGTAGATCCAACTAATATCTTAGTTGCTTTTGATGCGGGCAAAGTTACTTTCAGAACTGCCATGTATAAAGACTACAAGGGCGGCAGACAGAAGACACCTAGTGAATTGCTTGAACAAATGCCTGTTATTCGTGAAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTTCTCCACGTATGTGGAGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.85%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.10,-6.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //