Array 1 165364-170548 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMJZ01000023.1 Sphingomonas sp. Leaf5 contig_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 165364 29 100.0 32 ............................. AAGGCGTCGGACTGAGCTTCCCTTGCGCGCGC 165425 29 100.0 32 ............................. AAATCAGGCGGCGGCGATCTTGCGAAGGTCGG 165486 29 100.0 32 ............................. GCAGCCTTCTTCGCGCCCTTCAGCGCCCGAGC 165547 29 100.0 3 ............................. TCG Deletion [165579] 165579 29 100.0 32 ............................. GCAGCCTTCTTCGCGCCCTTCAGCGCCCGAGC 165640 29 100.0 32 ............................. GGATGGCATGACCGTCACGCTCGACTGCCGGC 165701 29 100.0 32 ............................. GGGTCTGCGGACCGAGAACGCCCGCCCGCCCG 165762 29 100.0 32 ............................. GACGGCGATATCGTCGTGCCGGTCGATGCGCG 165823 29 100.0 32 ............................. CAGGTGCGCAAAGCGGCCCGGTCGTCACGCCA 165884 29 100.0 32 ............................. CACCCTGTCCCGGCGCAATACCGGCACCGGGC 165945 29 100.0 32 ............................. CATGCGCAGGGGATGCAGCCGGCGACTGGTGC 166006 29 100.0 32 ............................. TTCGGGCAGTTCATGGCGAAGCTGACCGGCGT 166067 29 100.0 32 ............................. GGCTCAAGCTGGACCAGAAGGGTAAGGCACCC 166128 29 100.0 32 ............................. TTCGATCAGTTCGTCGCGATGCTTGTCCGAAG 166189 29 100.0 32 ............................. CTGACGAACAGACAGACGCACAAGCCGTCGCG 166250 29 100.0 32 ............................. CAGTCGTCGACCCTCATTACCAACGTCACGGA 166311 29 100.0 32 ............................. TTCCTCGACAGCGTCTGGCAGCGGCAGGAGGC 166372 29 100.0 32 ............................. TTGCGTACCCACGCGCGGCGGCTGCGCCACAC 166433 29 100.0 32 ............................. CGGGTTGGGGCGCTCCCCAAGCGTGATCTATC 166494 29 100.0 32 ............................. TCTTTTCTTGCCGCGCGTAATAACAGGATTGA 166555 29 100.0 32 ............................. GTCGTCGGCCGAGTGATCTTCATCGGGCGGGT 166616 29 100.0 32 ............................. TTCGACGCTGCCTTCATCGATGAGGGTGAGAG 166677 29 100.0 32 ............................. TCGACCGGCTGCTTGTCACACAGCGCATTGTA 166738 29 100.0 32 ............................. TTTAGCGTTTGTCTGCAAGGCGGCGCTTCGGG 166799 29 100.0 32 ............................. TGCCAACAGCATCTCAGGCGTCGCACCATTGG 166860 29 100.0 32 ............................. AACGCCCCGCTCAAAGGCTTCCGCAGCGACAC 166921 29 100.0 32 ............................. ATTGTCAAAATCGATCGCATCCCCGACTGCGA 166982 29 100.0 32 ............................. GATCTTGACGATACGCATTTGCTATTCGATCA 167043 29 100.0 32 ............................. TTGTCCGCCGCTAATGATATCTTTGTCGGTAA 167104 29 100.0 32 ............................. AACAAGCCGGATCATTGGAACGATGACGTTCC 167165 29 100.0 32 ............................. GCCGCGACGTGCAAGCGGCCGAGGCCCGGTCC 167226 29 100.0 32 ............................. CGTGTTGGTTCCCAGCGCCGTAATTTCTAAGC 167287 29 100.0 32 ............................. GGTTTCAAGCGGCTCGGCATCTTCGTGAAACA 167348 29 100.0 32 ............................. GAGACGCTGAACGGTTGGCACCAGATTCCCGG 167409 29 100.0 32 ............................. GCGCCACATACCGCAGATCTTCATCTGTGGCG 167470 29 96.6 32 ............................T TTGGCTGCAGGTATCGCGGGAGGCGCGAAGAT 167531 29 100.0 32 ............................. AACGACGGCGTGGTGAAGGTATCAGCCGCCGG 167592 29 100.0 32 ............................. ACGCCAGCGAATTTGCTGCGAAGCTGTGGAAG 167653 29 100.0 32 ............................. TTCTCCCTTCCCGACCAGCGCGAAGGGCAGAT 167714 29 100.0 32 ............................. TTTGCCAAGGATCGAAGCCTTTTCCGCGTCGT 167775 29 100.0 32 ............................. TGGCCGACACCTACGTCTTCGACACCGATCTT 167836 29 100.0 32 ............................. GACGCGACGGTGACGTTGACGGTGGAGCAATG 167897 29 100.0 32 ............................. GCGGTGCTTGCCGGGACGTCGTCGATGTTCGC 167958 29 100.0 32 ............................. GTTGATAAGCTGTTGGCGGTCTCCCGGATCGG 168019 29 100.0 32 ............................. ATTCGACAGACTTCCTCGACGCTCATCCCGCG 168080 29 100.0 32 ............................. AAGCCAAGCCGCCGTTGCTAGGCAGCAAGAGT 168141 29 100.0 32 ............................. CAATACCCGGATGGAATGTAGAAGAGCATCCC 168202 29 100.0 32 ............................. TCTCCTGCCATGTGTATGCTCCTCAGGCTTGG 168263 29 100.0 32 ............................. ACGACATGGATCGAGTCATCGCCCTTGCGCTT 168324 29 100.0 32 ............................. GCGGTCTAATGTCGAAAATCGAAAACGTGCCG 168385 29 96.6 32 ............................G ACGACCGGCCCTTCAAGGATGGTGCCGCCGAC 168446 29 100.0 32 ............................. TATGCCACGTCGATCATCTGCTGGAGCTGGCG 168507 29 100.0 32 ............................. GCCAGCAATGTCGTTCGCCGCACCTTCAATGT 168568 29 100.0 32 ............................. ATCACCCTGGGCGGGCGCGGCGATCGGATCAT 168629 29 100.0 32 ............................. CAGACGCCCGGCTTAAAGACCTGCTCGGCCCA 168690 29 100.0 32 ............................. CCGGCAGCGGTGTTCGGCACCGGACGCTTTCC 168751 29 100.0 32 ............................. AACATTCGCGGCGGGTATATTCAGGGTGGCCC 168812 29 100.0 32 ............................. TGCCTTGCGAGCGGACATGTCAGGCAGGGCAA 168873 29 96.6 32 ............................G GCGACGCGCGCGAGCGTGCGCTGCTCGACTGG 168934 29 100.0 32 ............................. GTCGCGTCCTGTAGCGCCTGTGTGTCGGCGAT 168995 29 100.0 32 ............................. GATATATACGGAAATATCATGTCGCGCACAGG 169056 29 100.0 32 ............................. GACCGGAAGAACCCTTTGCCTTGCTCCAATCC 169117 29 100.0 32 ............................. CGCCTCGTGGATATCCTCGAAACGCGCATAGG 169178 29 100.0 32 ............................. CCTGTTGGCTGTAGTATGCGCCATCTCCCGTC 169239 29 100.0 32 ............................. TGGATCAGCGGACAAAGCTGGCGCTCGAAGCG 169300 29 100.0 32 ............................. TTCGCCAGCGCCATTTCCTGCGCCTTCTCGAC 169361 29 100.0 32 ............................. CGGTCCGCAACGCGAAGAAGCCGAACGGCTGC 169422 29 100.0 32 ............................. TTCCGTGAAGAGACTTCCGGGAGCATACTTCC 169483 29 100.0 32 ............................. GCGGCCGGCATGGTCGCGGAAGGCACGGCCAA 169544 29 100.0 32 ............................. TTCCGTGAAGAGACTTCCGGGAGCATACTTCC 169605 29 100.0 32 ............................. GCGCCTGAACCAAAGCCGCGTGGCCCGCGAGC 169666 29 100.0 32 ............................. CCCGCCCATTGCTCGCTTGTCAGCCCTGCCGG 169727 29 100.0 32 ............................. CATGATCCTTGTCCCCGTCCGGCTTTCGCCCC 169788 29 100.0 32 ............................. AGAATGCGACGATCGTCCGCAAGCAGGCGGAG 169849 29 100.0 32 ............................. CACGGCAAGAGCGACCGCGCGCTTATCCCTAG 169910 29 100.0 32 ............................. GTTCTGCGGTAGGTCGAAGGTGGTCGCGATGA 169971 29 100.0 32 ............................. TGGCGCTGTGCTGTCGGCGTCTGGCCCTGTGA 170032 29 100.0 32 ............................. GGCGTTCGTATCGCCGGCGTCGGGATCGATAT 170093 29 100.0 32 ............................. CACGATGAGTAACGAAACCGGGAACCATAACC 170154 29 100.0 32 ............................. GTTGACGGTCTGCGTCATGCGGTCGCCGATCG 170215 29 100.0 32 ............................. TTGCGCGCACGCACCGCCGATTCCAGACCCAG 170276 29 100.0 32 ............................. GCGACAGCTCGGCGCAGACCGTCAATCGCGTC 170337 29 100.0 32 ............................. CTCCTCAATGCGTCGCTTGGTCCCGGCCTCGA 170398 29 100.0 32 ............................. ATGTTCTGCTGGAGGTCGAGCGCAACGCGCTG 170459 29 96.6 32 ............................T TGCGTGAACAAGACGCCGTTCAAAGTCCCGCC 170520 29 96.6 0 ........................T.... | ========== ====== ====== ====== ============================= ================================ ================== 86 29 99.8 32 GTCTCCCCCGCACCCGCGGGGATCGACCC # Left flank : CCCGGCATGATCGACCGGATAAAGGCATTGTTGATGCCGGCCAGCGCGACGGAACCGCCCGGTTCATCTGCCGTGACGCCGCTCCCGTCCGATCCGGGCTGACGCCGTGCCGCTGACCGTCGTCATCACCCGCGACGTCGAGGATCGCTATCGCGGCTTCCTCGGCTCGGCGATGCTCGAACTCGCCCCCGGCGTCTATGCCCAGCCCCGCATGAGCGCCGGCGTGCGCGGCCGCATCTGGACCGTCGTCGAGGAATGGCACACCCGCCTGCGCCGTGGCAGCATCGTCATGTGCTGGGCCGAACCGGCATCGGCGGGTGGTCTCGGCCTGTCGGTCCTTGGCGAACCGCCCAAGGACGTGGTCGCGCATGACGGCATCCTCCTCGTCCGCCGCGCATTGTCGGGACGCCAGATGCCAGAACCGCCGGGGTGAGGCTTTGAAGGGTGCGCGACAGGCGATCTTTGACATCGTGAACGAAACGAGGCAGTTGACCGGCAGA # Right flank : CGGCCCGTCGTTCTTCCAGGTTACCATGCTCGGTTTCCCCCGCACCCAGGGACTGTTTACACGAGGCGCGTTTTGGATTCTTCTGTGTTCCTTTGATTTGGGACGGGGAGGACAGGATGCGTTGTCCAGCGTGCGAGGGACCGACCTGATCAAGCGGGGCCGCAAGTCGGGCAATCAGCGCTATGTGTGCCGGGCCTGCGGTCGATACTGCACCGACAGCCAGCCCAGGTTCAGTGCCGAGACGAAAGCCCTGGCGATCGAGATGTACATGAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCCCCGCACCCGCGGGGATCGACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //