Array 1 45-961 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRG01000019.1 Acinetobacter bereziniae strain L98 NODE_19_length_64961_cov_34.3007_ID_37, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 45 28 100.0 32 ............................ ACCTACATGTAATTCTCGGTAATTTAACCATT 105 28 100.0 32 ............................ TAAGCCAATATCACAAATGACAGTAGGGGAAA 165 28 100.0 32 ............................ AAACGGAATATTCATGGTCCTCAGTGAAAATT 225 28 100.0 32 ............................ TGAACCAAAAATACAAGTCCGTGATTATCCTA 285 28 96.4 32 ...........T................ CCCCGATATTGACAGCGGACAGACATTCAAAA 345 28 96.4 32 ...........T................ AAAGTGAGGGCATATTTTCTTACATTGCTGAT 405 28 96.4 29 ...........T................ CAGTCACGAAGCCATCTTCAAATTCATAG 462 28 92.9 32 ..........AT................ ATCGGAGAAAAAGTACAAGAGGCACATAGTAA 522 28 96.4 32 ...........T................ GAAATTTCGGAATTTTCACCTTAATTATTGTT 582 28 100.0 31 ............................ TCCATTATTAACAACAGTTTTAGTTGTGATT 641 28 100.0 32 ............................ GTGGTGAGTAAGTTTAAACATGCCGAAAGTGT 701 28 96.4 33 ..................T......... AATAAATTTGGATACTGGGGGAGTGATTTGGTC 762 28 100.0 32 ............................ TGCAGAAGTTGAGAGCAAAGCCAAAGGCAAAT 822 28 100.0 32 ............................ GCTAGCAAACGCATGGCAATATGCCGCTGAAT 882 28 100.0 24 ............................ TCATTGATGTTAAAGAGGATTACA Deletion [934] 934 28 89.3 0 ..C......T...........C...... | ========== ====== ====== ====== ============================ ================================= ================== 16 28 97.8 31 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : GTAGCTTAGAAACAAGCCTTACGCGCCATCGTATGCGTAATAAGG # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGATTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 68858-69428 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRG01000007.1 Acinetobacter bereziniae strain L98 NODE_7_length_143942_cov_31.4859_ID_13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 68858 28 100.0 32 ............................ ATTCTAATCATTGCTGCAACGGTTGAACCAGT 68918 28 100.0 32 ............................ CAGGATCTCGTGCTTCAGCTCAACGACCGATG 68978 28 100.0 32 ............................ CATGACCGAACATGTCCCACCATTTGCGTGTT 69038 28 100.0 33 ............................ AACGTCCGCCTTTGTCTTTGTGCATGACTATGA 69099 28 100.0 32 ............................ TACTGGATTTTCGATACTAATGGTTTTTGTTT 69159 28 100.0 32 ............................ AAAGTGGACCAAAGCTGGTGGACGTGTCTTGG 69219 28 96.4 32 .........T.................. TGAAGCATGTGTGGCAGGTAACTTACCAGCAA 69279 28 96.4 32 ...........C................ GCAAGACACAGTTAGAAGACCGTGGCAGTTGG 69339 28 92.9 32 ...G.......C................ TGGTAATGCAACAGCACAAGATGATTGGAGAA 69399 28 89.3 0 .........T.........A.......C | AC [69423] ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.5 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : GTCTGGATATACCTACCAAGATTTTTAAAGGGTTTACAAGTATTTTCAAAGACTTGTAAGCCTTTTTTTATGGTTAGAATTTTGTTGTTTTGACTAGATTTATCAAAAATCATAGAAATAATTACTAGACTTCACCAAGAATGCACCAAGATGAGGATGAATGAAGTTACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAGGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : CTTAAAATTAATTGGATATAGGTTTAGTGTGACTGGAAAAGTCTAATCAATTGAAAAATTTCAATATTATATTTAAAACAAAATTTGACAAAATGAGCGACATAATCTTTGACATTATTACAATTAAAATTTGACTAAATTTATGATTTATAATAATAATGTTTTGACATTTTATTTGACAAAAAAATTGAAAAAATGCCTGATCAAAGTAAAGTTTGGCTAGATGACACAACTTTAAGAGTCATGACGTACAAGTCCGGCTCTTTTACCTTTCAGCTTGGGTTTGACTTAGAGCAGGTTACGCCTATGCTTGATCGTGTAAACGATGCACAGAATAGATTTAATAAAATGCCAAGTTTGCCTCAAATTATAGATCAAGTACAAGAAAAGGTTTTAGCAAGTAGTATTTATAGTACAAATACCATTGAAGGTGGTCAATTTACAGAGCAAGAGACGAAGGAAATTTTAAGATTAGATCCTAAGACAATACAAAAGACCGA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [86.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 10-218 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIRG01000091.1 Acinetobacter bereziniae strain L98 NODE_91_length_10822_cov_51.1819_ID_181, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 ............................ TTAGCAAAAAAACGGATGGTATTAGGTCAATG 70 28 100.0 32 ............................ CTAGTAAAATCACTTCTTCAAGTTGCTCAGTT 130 28 100.0 32 ............................ CAAAGGTGCATGTATGCATCTAATTGCCATTC 190 28 85.7 0 .......................CCT.T | A [212] ========== ====== ====== ====== ============================ ================================ ================== 4 28 96.4 32 GTTCGTCATCGCATAGATGATTTAGAAA # Left flank : TTACGAATGG # Right flank : TCTAGAAACAGTCAAAACATTGTAATGAAAATTAACTCATCACATCATCCAATACTTTTACCATTAAAATTCTCTTGTATTTATTTTTAAGAGTCAATTTAGACTCCACTCAACTATCAAAAAAATCCCCGCACAATGGCGGGGATTTTTTTATGATATGAGATCAGAATGATTTACATCACGATGATCATATCGACCATGCCCACCACGATGATCATCATCGTATGGCGCAACAATACAGCCTGTGAGTGAAACACCTAAAACACCGAGTAAAATAATTTTCTTCATCATGACAGTAGCGTCCTATTCATCTTATTTTTTTAAGCTTAACTGTGTAATGTGAAGTTCAACGCAAGCTTGTGTTTCAACGTGTAGTTATTTCAACATGATTTATTCACACTACTTATTTTTAGATAAAAAGCTATTTTAAATTAATAGGTTAATGTATGAATCCAAAATAGTCGTATGAGTTGTCCTCGATCATAGGGAAAACTGGAGAT # Questionable array : NO Score: 5.68 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.52%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [10.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //