Array 1 318755-319253 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAGHQY010000003.1 Shimia sp. R11_0 NODE_3_length_491885_cov_71.816145, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    318755	    36	 100.0	    30	....................................	GGGCCGCAGTAGCGAACACCCCTCGTGACC 	
    318821	    36	 100.0	    30	....................................	TTATTCGGAACCCATACGGCAAGACGATCC 	
    318887	    36	 100.0	    30	....................................	CAAAAACGGACACCGCCGCGTAATCATTGT 	
    318953	    36	 100.0	    30	....................................	TGAGAAAAACGGCACTTGTTGTCCTGCCAC 	
    319019	    36	 100.0	    30	....................................	AGACATCACAGGCATTCTCAAAGCCACACG 	
    319085	    36	 100.0	    31	....................................	AAAGAGGTTAGCGCCGAATGGCCCCCATGCC	
    319152	    36	 100.0	    30	....................................	CTTCGTCGCCCACCGTCCATTGATCTGACA 	
    319218	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
         8	    36	 100.0	    30	GTTGCGGCTGGACCTCGGATTTTGAACAGCTACAAT	                               	       

# Left flank :   CAGATTTCTAGCAGCTCTGCGTTCACGGTTCGGCGATTGACTTCTGGAGCCAATAATGACGAATTCTGCATCTGGAGCGCATAAAACTTGAGTGCAGTATCGAGCTTTGCAGTGCGCCACGAACGGCCCGTTGCCGACACTGGCTCATCTTCGGGCATGCTGCGGAGAGGCTCTTTGACGGAAAAATTCGCCAAGTATGCGAGACGCTGAGTTGTGAAACCTCCAATTTTGTCTAGGCTCAATTCATCTAGATAATCAGATTGACCATTCCTGCCACGCTTGCCGGTTGGCGGCGATGTCTAGTCATCTCAGGATCAAACCAAATCGACAACGATCTACGCCGCTTCAACGCATCATTGTAAGCCAACTAGTTCGTGGTCTGGTACTTCGTGTGGGCCCAATTACTCATGTCACCCAGCTATCACACTGGACTCAAGCAGTGAATCCTTGAAATGATTTGTGCAGCAAAGCCTTGCAGCCGCAAACCTAGGACGTCGCTA
# Right flank :  TAGATCTCGGGTCAAATATCTGAAAAAACAGGGATTTATTCGAGATCTATTGTAAGTTTCCAACATGAATTACCTCAGAACATTACAAGTTGCTGCGGATTTTCCCGGGCCGCATGGCGTCCTTGATCCGAGAAATGAATAATATCACGATATTGCCGGTCAGTGAAGTTAAGGATCTGCACGTCACCTGAATCGGGCAAATGGCGTTCGATCCGGTTGACGCGCGTTGCAAAGGCTTCTTTGCCATTGACAAAACGAGCATAGACCGAAAACTGACTGCGTTCGAACCCCTCATCCAGCAGGAAGTTGCGAAATGCCGCTGCTTTTTTTCGCTGAAGTTTCGTGTCGGTGGGCAAATCGAACATCACAAGAATCCACATCAACCGGTATCCTGACAGTTGCTTGAAGGTTATGCGCATGCACCCAAACCTGTGAGCGTATCCGACGTTGGCGGGACAGGCAAAGCGAGGGCCAGCTTGCCGCTCTCGAAGCTCTGCCCG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGCGGCTGGACCTCGGATTTTGAACAGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [8,10] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTGCGGCTGGACCGCGAATTTTGAACAGCTACAAT with 95% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-5.20,-3.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.64   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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