Array 1 48121-52382 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXLL01000012.1 Caloranaerobacter sp. TR13 contig12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 48121 29 100.0 36 ............................. GTATAACTATTGGAAATTCCATGACATCATCATCAC 48186 29 100.0 36 ............................. GACACAACCGATAAATATATAGCTGGTGATGATGAT 48251 29 100.0 38 ............................. TTATTCTTTTTAAACTTTTCATATTCTTTCTCTCTTTC 48318 29 100.0 36 ............................. AAGCGTTTCTGTTCTGTATTCTGCTAAAATCTTAAG 48383 29 100.0 38 ............................. GTATTTGTCCATACTGCCATACATAGTTCATCATCTAA 48450 29 100.0 37 ............................. TTCTATAATATTCATCTTGCAATTCAAATATCAAATT 48516 29 100.0 37 ............................. CTTTTCTTTTAGGAATTGCAGAATACCAACTACAATA 48582 29 100.0 37 ............................. GTAGAAATTGTTGAGGGACAAGCACCGTTACAAGTAG 48648 29 100.0 37 ............................. AATTCAACGTCTTACTAGTCAAAGTAACATCAATCAA 48714 29 100.0 35 ............................. AACTGCTTAATACTCCAATTGTGCTTATATGAATT 48778 29 100.0 36 ............................. CCCAACCGACGCTATTAACATTGTTCGTATCTCATA 48843 29 100.0 38 ............................. GCATAATAGTCGACAATAACATCTACATTTAAAGTATA 48910 29 100.0 36 ............................. CATAATGCGAAAGTATAAAGTGGTCCATGATTAAGG 48975 29 100.0 36 ............................. GGAGCTAGCGTGTCGGCAATTCTTACAACTTCCCTA 49040 29 100.0 38 ............................. TATAATGCATAGGTGGTGATATAATGCCGGTATTCTAT 49107 29 100.0 36 ............................. GGAATTACGTTAGAGCAAGAAGTACAAGCGAAATTA 49172 29 100.0 38 ............................. CGTTGTTGCAATTCTGGTACTGCTATATATTTAAGGAC 49239 29 100.0 37 ............................. GATGTGTATTATGTAGAAGTAGATAATGAAGAAATGG 49305 29 100.0 39 ............................. AATTGTTTTTCTACTTCTTCCGCATAAGGTAACATTTTA 49373 29 100.0 37 ............................. CCGCTAAAATCAATCATTCTTACCCCTCTTTTCCTTT 49439 29 100.0 36 ............................. TTCTAGTTGTTCCTTTTTCTTCGTCTATTTCTATTC 49504 29 100.0 37 ............................. TTTGGCGGCTCAAACATTTTAATTCTTTCAATAGCAA 49570 29 100.0 38 ............................. AGCGAATATTGACAATACGCTTATGACTCAATCTAATC 49637 29 100.0 38 ............................. CAGCCTTTTCGTGAAGATCATCTCTCATTACTCCAGTT 49704 29 100.0 36 ............................. GGGTAAAATCTTATCCTTATTCCTTCTATTGTCCCG 49769 29 100.0 38 ............................. TTGCATTTTTTACACTCTTTAAATTTTGAATATTTAAG 49836 29 100.0 39 ............................. AAACTTCTCGCAATTCTTGCTATACTAACATTTTGATAA 49904 29 100.0 37 ............................. TACGCTGAACAAGACTATGATGTAAATACAATAGTTC 49970 29 100.0 37 ............................. TTACAACTATAAGAAGCAATTGCTAGAATTTTTTTGC 50036 29 100.0 38 ............................. ATTATTGCATCATGGAAATAGTTGAAAGAAGAATAGAC 50103 29 100.0 36 ............................. CATTATATTAAGAATGTTTATAATGGAAAAGAATAC 50168 29 100.0 37 ............................. GCGAAGCCTCTAAACGTGGCAAAAGGGCAAAGAAAAA 50234 29 100.0 39 ............................. AGGGCAAGCTGTGGAAATATATAATATAACGAATAAAGC 50302 29 100.0 38 ............................. CTAAAAAGAATTGACAATTGTACGAACAAATGTTATAA 50369 29 100.0 37 ............................. TGAAGATTTTTTGAAATTCACTTGTATGAGCAAGAGC 50435 29 100.0 37 ............................. TCGTTATTTATCATGTATTTTATATACTTATTTCTTT 50501 29 100.0 36 ............................. TCATAATTTTCACTCATAGTTTCTTTGTCTTGTGCT 50566 29 100.0 39 ............................. TATCATTGGGGTGCAGGAAAAACAATGCCTTTAGACCCA 50634 29 100.0 36 ............................. GTTCTATGCTCAAGCTATTTTTTAAATTATCCCTTT 50699 29 100.0 37 ............................. GGACAAGCTATAGAAATATATAATATAACGAATAAAG 50765 29 100.0 39 ............................. TACCATATCAACACTATACAAAGTAATACGCCCCCCAGA 50833 29 100.0 37 ............................. GATGTAAGTGTGGTAAGTAATTATTATGATGATTATA 50899 29 100.0 37 ............................. ATGTTTCCTGTATTACCCGCTAAGTCTTTAATACCTT 50965 29 100.0 35 ............................. GAAGAATTATTGGAAGAATTAGAAGAATTGGAAGG 51029 29 100.0 38 ............................. TCAAAAAATACACAGGTTATTTTCACACGACCCCCACC 51096 29 100.0 39 ............................. TTAGAAAATCCGGAGGAACTAAAAGTTAAGGTATCTGTC 51164 29 100.0 36 ............................. GTCGAAATTGTTGAGGGACAAGCACCTGTTACAGTA 51229 29 100.0 36 ............................. CATGACTTTGTCAGGTTTTTTCTCAAGATATTCAAA 51294 29 100.0 36 ............................. CATGACTTTGTCAGGTTTTTTCTCAAGATATTCAAA 51359 29 100.0 39 ............................. GCTGATCTTATTGGTTTATTACTCCAGGTGCGTAAAGAA 51427 29 100.0 36 ............................. CATGACTTTGTCAGGTTTTTTCTCAAGATATTCAAA 51492 29 100.0 39 ............................. GCTGATCTTATTGGTTTATTACTCCAGGTGCGTAAAGAA 51560 29 100.0 36 ............................. AGTATCGGATTTATATTGCTAAAAGTGTAGGAGATA 51625 29 100.0 36 ............................. AGATGGGAAAGACATGAAGAATTAAAGGTGATAGAA 51690 29 100.0 36 ............................. AGTATCGGATTTATATTGCTAAAAGTGTAGGAGATA 51755 29 100.0 36 ............................. AGATGGGAAAGACATGAAGAATTAAAGGTGATAGAA 51820 29 100.0 37 ............................. TAAATTCTTCGTTTAGTTTTTCAATATCTTCTTGTGT 51886 29 100.0 37 ............................. CTACTTCTAAAAAACTATCTGTCAAATGAAGTTCATC 51952 29 100.0 40 ............................. GGGTAAAAAAAAGGTTTATAAGTAGTACAAATTATGGCCA 52021 29 100.0 37 ............................. GAAATTCTTCGTTTAGTTTTTCAATATCTTCTTGTGT 52087 29 100.0 37 ............................. CTACTTCTAAAAAACTATCTGTCAAATGAAGTTCATC 52153 29 100.0 40 ............................. GGGTAAAAAAAAGGTTTATAAGTAGTACAAATTATGGCCA 52222 29 100.0 36 ............................. GGCGCTCCTGCTTCTTCTTCAAGTATATCTGGGTCA 52287 29 100.0 38 ............................. GAATTTTTATGATGTTTTACAGAGCTTAACCAACCTGC 52354 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================== ================== 65 29 100.0 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : AGAAGACTCTCTTTATATTTATGAAATTAAAGCATCTAGTCATATAAAGAAAAAAATAATTGGTATTGATAAAAGCTTTGATGATATTTTTTTATAATCCATAGGGAATTATATACTTTGTTAAATTGTGAATGATTTAAAATATAATTTCCGTTTATGGATATGGGCAAAATCTACCTTATAATTTATTTAAATCGAAAATTTTGTTTTAACCATAATTTTTAGTATAATGGTATGATAGATGATGAGATTTATTAAATAAGTTTTTGAAAAGTACTTTAGGATTTTGCTTTAAATCATAATTGAGAAATTCTAAAGTTGCAGTAAAGTAATTTTAATTAAAAAAGTTATGAAACTCAAGAAATATCTTAATCAAAAGGCAATTAATTTATATTACATAAAACACTACTACAGCTTTACTGCAAAAATACTAATTATAATTAAATTAAAATAAGCTGTAAACTTTTAAAATTCTTATAAGTAGCTATTATAAAAATGGG # Right flank : GTGGTCTATTGTAGAATCTTCTTGATATTTCTCTGGGTCGTTTTATATTAACTATGTGGAATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [81.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 63-1358 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXLL01000004.1 Caloranaerobacter sp. TR13 contig4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ========================================= ================== 63 29 100.0 40 ............................. TTTTTATTATTTTCTCAATGATTCTTTTCATTTCTTCTTG 132 29 100.0 38 ............................. TCTATATAGATAACTGCATATGTACTGAATTTCGCTCT 199 29 100.0 36 ............................. TGCTACAAATTCGTTTTTTCTAACTAGATTGATAAA 264 29 100.0 36 ............................. TTTTCTTTAAGTATCTTACTAGCTCTATCAAACTGT 329 29 100.0 35 ............................. ATGGGAAATATAATTCCATTATGGCTAGTTATAAA 393 29 100.0 39 ............................. AAGAAAAAACTCAAATTTTAAAATAAGTTCTCCCCCAAA 461 29 100.0 35 ............................. GTCATGGTTTGGATATGTTAGTTGATCAGTATCCA 525 29 100.0 37 ............................. ACACTGAACGTTTAGCTTTTCTAAAGATACCAAAGCC 591 29 100.0 37 ............................. TGATGGAAAGATAGTTGGATTCAAAAGTGAGAAAAGG 657 29 100.0 39 ............................. GCCGGTTATGAGTGGTTAACATATGTCATAGCAACAATA 725 29 100.0 39 ............................. TTTTATTTGGATTAGTGATACACCGGTTGGAATTAGGAG 793 29 100.0 39 ............................. TCAAGTGACCTGGTGTATGTATTTAAAGCTATGTTAGTA 861 29 100.0 39 ............................. CTTACAAATTATAAGCAAATTGTTGAAGTTGAAGGAAAT 929 29 100.0 38 ............................. TTTTAACGACTTCGTCGCTACAATTGCCTTTTCTGTGT 996 29 100.0 36 ............................. TTTATTACATAGGTGTGTATCTGATACTACTCCAAA 1061 29 100.0 38 ............................. AAAAAACCAAACGAAGGATATACTTGGCTAACTTTAAT 1128 29 100.0 38 ............................. TTTTAACGACTTCGTCGCTACAATTGCCTTTTCTGTGT 1195 29 100.0 36 ............................. TTTATTACATAGGTGTGTATCTGATACTACTCCAAA 1260 29 100.0 41 ............................. TGAAAAAGTAGGAGATTTAATGGATGAAGCTATTACAGAAA 1330 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ========================================= ================== 20 29 100.0 38 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : ATATTAACTATGTGGAATGTAAATTTAAAATTAATTTAATTTTATATTAATTTACTATTGACG # Right flank : ACAGCAGCTAGTACAGTAAGCAAGTAATTAATAATTAGTTTTATATTAACTATGTGGAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 38-2782 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXLL01000005.1 Caloranaerobacter sp. TR13 contig5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 38 29 100.0 37 ............................. ACAGCAGCTAGTACAGTAAGCAAGTAATTAATAATTA 104 29 100.0 36 ............................. GACAGTCAAGAAGTAGCAAGCGGGAATGTTGACATA 169 29 100.0 36 ............................. TGTTGATACAGGTAATTTGAGAAGCTCGATAGATAA 234 29 100.0 38 ............................. AAAAAACCAAACGAAGGATATACTTGGCTAACTTTAGA 301 29 100.0 36 ............................. TGTTGATACAGGTAATTTGAGAAGCTCGATAGATAA 366 29 100.0 38 ............................. AAAAAACCAAACGAAGGATATACTTGGCTAACTTTAGA 433 29 100.0 39 ............................. GACATGGGGGATTATGAAAATGTTGATTTAACAGATACA 501 29 100.0 36 ............................. ATATCTTTGATGAGAAGTTCATTTATACAAACAGAT 566 29 100.0 37 ............................. ATATCAATATTAAACTATTTGTCATTTTTAATACATC 632 29 100.0 38 ............................. GACGATTCAGTTGTCTGTGTATTGTCAAAATTCTGTAA 699 29 100.0 39 ............................. GTTGAAATAATAGAGGGTCAAGCACCAGTACAAGTTGAG 767 29 100.0 36 ............................. GATAATAACTAAAATCATTTTGCCCCTTAAACAACC 832 29 100.0 36 ............................. AATGTTAAAGTGTTAACTAACATTAAGTTAGAGAAT 897 29 100.0 38 ............................. ACTGGAGGACTTCCTAACATATCAGTTAAAGTATTTAA 964 29 100.0 39 ............................. TAAGAAAGGGGATAAATAATATGGGTAAAATTCTTTTAA 1032 29 100.0 37 ............................. CTCCAACTATTCATGTAATATACTACTGTACCATTGG 1098 29 100.0 38 ............................. GGTCTAGAACAGCATGAGTATATGAGAATATGTTATGC 1165 29 100.0 38 ............................. TCAATCAGAAAACATGGAGCATATATGACAGATGAAAT 1232 29 100.0 38 ............................. ACTGGAGGACTTCCTAACATATCAGTTAAAGTATTTAA 1299 29 100.0 39 ............................. TAAGAAAGGGGATAAATAATATGGGTAAAATTCTTTTAA 1367 29 100.0 37 ............................. CTCCAACTATTCATGTAATATACTACTGTACCATTGG 1433 29 100.0 38 ............................. GGTCTAGAACAGCATGAGTATATGAGAATATGTTATGC 1500 29 100.0 38 ............................. TCAATCAGAAAACATGGAGCATATATGACAGATGAAAT 1567 29 100.0 37 ............................. TTATTCTATCTCTTATTCCCTTTTCACTTGTATAAAT 1633 29 100.0 36 ............................. GGGGATATAGTAGACTATGAATTTGTAAAGCAGTAT 1698 29 100.0 37 ............................. TTATTCTATCTCTTATTCCCTTTTCACTTGTATAAAT 1764 29 100.0 36 ............................. GGGGATATAGTAGACTATGAATTTGTAAAGCAGTAT 1829 29 100.0 36 ............................. TATTGACAAAAAAAACAGCTGGACTAATCATCCAGG 1894 29 100.0 37 ............................. GAATATTTTAAGAGAAATAGCGTTAATAAAAGTCAAA 1960 29 100.0 36 ............................. CTATTTATAAAAACAACTAATGCAGCTGACTCTAAA 2025 29 100.0 36 ............................. TGTTCTCTTTCGTATTCTTCTTCAATTTCAGCACAT 2090 29 100.0 38 ............................. CTTGAAAGAGAAGTGGTACTTAAAAATAGTACTTGGGG 2157 29 100.0 39 ............................. TCGGCTGAACTTGATGACCAACTTAATAATAGTAAAAAT 2225 29 100.0 38 ............................. GGAAGAATCATATTAGGAAACAAAGGTCAAAGAATAAA 2292 29 100.0 35 ............................. GGAGCAGAGAAAATATTGATGCTGATGGGTTTGAC 2356 29 100.0 38 ............................. CTTTATAAGTCAGGGATTATTCAGGAAAGATATTCAGG 2423 29 100.0 36 ............................. CTACTCCTTACAACTAATTCAACTACATTTTCTAAT 2488 29 100.0 38 ............................. TTTAAAATTGATGTTGCTACTTTAATAATATCTTTTAT 2555 29 100.0 39 ............................. ACAGCTATGTAAAGCTAGGTTAAGTTTATTAAAAATGAA 2623 29 100.0 37 ............................. AGGTCTGGTATTACCACTCAGGTTATCAATCATTCGT 2689 28 82.8 37 ........C........C....-A....A GGTGTAACATTTTTCATAACAAGTATAAGAGTAGTTG 2754 29 75.9 0 A..C..C..........AAA...A..... | ========== ====== ====== ====== ============================= ======================================= ================== 42 29 99.0 37 GTTTTATATTAACTATGTGGAATGTAAAT # Left flank : AAAGTAGGAGATTTAATGGATGAAGCTATTACAGAAAG # Right flank : TTTAGGTAGATGAATTGATCATCTACCTTTTTTTATTCTTTTATGTAACAAGCAACTATTTCACCGTAGTATAAAATATGATAGTTTTGATTTGGATAAAAATTCTGTTTTATATCCCCATCAACTAGTGCTGGTTCCATAGCCTGTTGATAGACCACTCTACATTCATAATGTAATTCACAATCTCCAACAATAGGAGTTGATAAAACTTTACCATTTTCACATGATAAATTACACTCTTTAAATTTATCAAAATCTCTTCCTGATTTTGTACCACAGAAAGCTAACTCTTTTTTCAAATCTTTATTTAATGGAACACTTATTGTAAACTCTTTTGCTTTTTCTAAAAGCTCATATGTATATCTTGAATAACGAACAGCTACAGTGAAAATTGGTTTATTCCAAATAAATCCGATATTTCCCCAACCTATAGTCATTGTATTAATCTTATCTTCGTGTTTAACAGTTAAAAAAGCTCCTTTTGGTAGTTGCTTAAGCAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGAATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //