Array 1 1848007-1851336 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP016873.1 Legionella pneumophila subsp. pneumophila strain FFI105 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1848007 28 100.0 32 ............................ TGCCACCAGGATTATGCCCAAAAGCAAACAGG 1848067 28 100.0 32 ............................ ATGATGCCCGACACATCATCATATAAATGATA 1848127 28 100.0 32 ............................ ATCAGGTGGCTTGATTACCTTGGTCACTCCTG 1848187 28 100.0 32 ............................ AGATAAATGTCTCTCAACGGCTCAGAGTCTAA 1848247 28 100.0 32 ............................ TCTTCAAATCCTTCATCATCAATCCCAGTTTT 1848307 28 100.0 32 ............................ AGTCTGGAACACCAAGTGCTACTGAAGCAAGA 1848367 28 100.0 32 ............................ TAATTGAAATAACTTCTGTCCTATGTTGATTC 1848427 28 100.0 32 ............................ AGTAGAGGCAGCATTCACTGGATTAATAAATG 1848487 28 100.0 32 ............................ AAAGGCATTCAATATCGACATGATGCTTTTTA 1848547 28 100.0 32 ............................ TATTCATTCCGTGTTCTCTAAGAGCATAATAA 1848607 28 100.0 32 ............................ TTTTACCGAGCAAATAAAACAATATATCCAAT 1848667 28 100.0 32 ............................ AGCAAAAATAGCTATAGATAAATGCGTCAAGG 1848727 28 100.0 32 ............................ ATATCGCATATGATATCCGCTATTTCTTGATT 1848787 28 100.0 32 ............................ TTTCCAGTAGCTTTCTTTCTATCTTTTTTATT 1848847 28 100.0 32 ............................ ATCGCCTGATATAGCGGACGCTCTTGCAAATA 1848907 28 100.0 32 ............................ GTCCATTCTTGCGTTTCCGTCCTTGTCGTATG 1848967 28 100.0 32 ............................ AACGATGAAATTCATTTAAACGAAGACGAAGT 1849027 28 100.0 32 ............................ TACCGCTACAGTTCGAGAGCTTGTACTTCGAA 1849087 28 100.0 32 ............................ TACAGTTAGAGCAGCGTATTAACATAATTTAC 1849147 28 100.0 32 ............................ CTGAGTCCTCAGCAAAAACATTAACATTTTCT 1849207 28 100.0 32 ............................ AGTGTCATAACCTGCTTAGTTCCCCTACAGTT 1849267 28 100.0 32 ............................ CAAGGACTATTTCAAGCAGTCGGGGAGCAGGA 1849327 28 100.0 32 ............................ TATTACCAGTCACGATACTAGGTTCCCTAGTC 1849387 28 100.0 32 ............................ ATGAACTGCCAATGGAAGCCCAAGAAAAAATC 1849447 28 100.0 32 ............................ TTAATTATAGTGCTGTTATCGGCCACTGTTTC 1849507 28 100.0 32 ............................ ATTCGAAGTACAAGCTCTCGAACTGTAGCAGT 1849567 28 100.0 32 ............................ TTGTCTCTCAGCAAATAATCTTTTTAGTAGAT 1849627 28 100.0 32 ............................ CAATATTGGCATAAGCAACAACAAAAAGACGA 1849687 28 100.0 32 ............................ ATGCATCTGGGCGTTTGGATAAGCTTCTTGAT 1849747 28 100.0 32 ............................ GAGCGAAACTTCTAAATTTTCGACATCTAATA 1849807 28 100.0 32 ............................ ATTGCAAAAACTGAAAAAACCTATACCCAGGA 1849867 28 100.0 32 ............................ GATAGCATAACCTGAATCAATTGATTCAAATT 1849927 28 100.0 32 ............................ TCTTTCGTTGCGTCTTTCAACAGCCACGCCAG 1849987 28 100.0 32 ............................ TATAGAGGTTAAGCCTGAGCATTTACCTTCAG 1850047 28 100.0 32 ............................ TTTAGAAGGAGAAGCAAAAACAGACGAACCGG 1850107 28 100.0 32 ............................ ATAGGCGAGAATGACCGATGTGTAATTATAAG 1850167 28 96.4 32 A........................... AACCGAGATAGCCAAAAAGAACTTAAATTTGA 1850227 28 100.0 32 ............................ TAAGTCTGTTTGCAAAGTCACTATTTGACATG 1850287 28 100.0 32 ............................ ACAATAGTGTCATAGTCAAAAAATTTCTTAAT 1850347 28 100.0 32 ............................ TTCAGCTAAGGCTTTTTTATTAAAACTTAAAT 1850407 28 100.0 32 ............................ ATGATATCGCCAAGGCTTATTGAGTGGACAGA 1850467 28 100.0 32 ............................ ATCCTTCGAGAGGAAGGAATCCCTCCGTATGC 1850527 28 100.0 32 ............................ AAAGGAGGCAATCAAAGCGCTACCCATATGAG 1850587 28 100.0 32 ............................ TTTTCTCAAGTAAGCCGCAGGATACTTTATGT 1850647 28 100.0 32 ............................ TTCAAACGGCGGTGACATTTCTTCTGGTTTTA 1850707 28 100.0 32 ............................ TAAAATCGAAGCAAGGTGATGTTATTGGTGTT 1850767 28 100.0 32 ............................ CGCCCCAGGGCCAGCAAATAAATTAATTATCT 1850827 28 100.0 32 ............................ TAAAGACGTGTTGGCTCTAATTCTACCGAATA 1850887 28 100.0 32 ............................ TAAACAAGGATGTGAAGTTAGATTTTTTTCTA 1850947 28 100.0 32 ............................ ATATGGCCAAAGTTGTTCCAAAACATCAGAAC 1851007 28 100.0 32 ............................ AGACAACCAGGCCAAAACCCAAATTTCCAATT 1851067 28 100.0 33 ............................ GAAGGCGCAAAGATTAGATACGGATCGCAGCAT 1851128 28 100.0 32 ............................ AATGACAAAAATCATATCAATAAATAAAAACA 1851188 28 100.0 32 ............................ ATTCATCGCTTGACCAATAGAAAGGTTCATCT 1851248 28 100.0 33 ............................ GATTCGATACATTTTTTAACTCGTCGCCCCAGT 1851309 28 96.4 0 ...........................G | ========== ====== ====== ====== ============================ ================================= ================== 56 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACACCTTGACAGAGGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAGGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAATGGGCAAAGACACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAAGTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAAAACAAGGTAAATTCCTTGAATTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : GTTATTATGTTAAAGGTATTGGCACGCTACGTAGCAAGGTCAGGCCTTGGTACGACCTTGTTTTGATTAGGAAAGTCTAATTATGACTATAATCTCCATTTCTCTTTATGGAGTATAGCAACCGTTAGTCAAATCTATACATAACCTAAACACATAAAAATAAACTCCCTAATTCCATGGAAATGAGTGTAATTGGATCGCAGTCAAAATAAATTGTGAAGTATGATTACTGAGAAAATTAAATTTAGTTGATGAGTATCTATTGGATCATGAGAATAGTCTAATGATGTGCGTTAATTATGCATATATGCTAAAAATTACTACCTGATAAGCTAGACAGTGTCGTCAAATTAACTTCCCCATAGTTCAATACACCTGATTTGTACTGCAGCAAGAAAAGAAGAGGTGTTTTTTGCATATCTTGTGGCAATCCCCTCCAACGTTTGAGATGGGGGAAGGCATTCTCCACCAGATGACGAAGTTTATAGATCGCTTTATCA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //