Array 1 97225-97013 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB891769.1 Streptomyces sp. LaPpAH-165 B070DRAFT_scaffold_15.16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 97224 29 100.0 32 ............................. CTGCCGCCCTCCGTCAAGCCGAAAGAAGAAGG 97163 29 100.0 32 ............................. CCCGGCGCCGAGGAGATCAAGCGCCCGGAGAT 97102 29 100.0 32 ............................. GGGTTTTCGCAGCGTCACGCCGAGGGCCTGAC 97041 29 79.3 0 ......................CACCAT. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 94.8 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : GGTACGAAGTGCTCCCGCGGTACGTCGGCGAATGCCGCCAACCACCGGCTCTGACGGCCCCCTTCGCCGAGGGCCGCGGCGAACCGGGCGCGCAGGGCGGCCGTGGCGATGCCGTTCGGGTCGGTCATGTGGTGACCCCTTGCGGGTAGTTGGTGGGTGGGGCGGTGACGGTGGGCATCTGGGTGCGATTCTGCGTCCGGGGGTGGTGTGGTGGCGGGGTTGTTCTCGAAAGAGCACCCGTGTGCGTGAAGGTCCCACGGCGGAGCTGAGATTTGAGCGATAGGCGTAGCCGTGTACGAGTGCTGCGGCAGATCGTCGTGGCGCCGGGCGGGCTGTCCGGCGGGTAGGCAGGGTGGAGGACGGTGCGGTGGCGCGAGAGTGAACGGTTGGGCGGGCAGGTCGCCGAGTGGGCAGGTCGCGGAGATTCGGTCGATATGTCGGAATCAGTGAAAGTGGTCAAGAACAACGATGGCGCGGGATAAAGTCCCAGGTCACGGAGT # Right flank : ACCCACGCAGCGCCCGCCCAAGCCCCCACCCGGCTACGCTCCCCGGCATGACCGACCCTCAAGCCCGGGCCGACTTAGCCCCCGACCTCATCCGAGCCCTCCTCCGCGACCAGCACCCCGATCTCGCCGAGCTCCCTCTCAGCCTTGCCGCGCGGGGGTGGGACAATCAGTTGTGGCGGTTGGGGGACGGGCTTGCCGTGCGGTTGCCGTGGGCGACCTCGTCTGCTGATGAGTTGTTGTTGAAGGAGCATGCCTGGGTGCCCGGGCTGGCCCCCGGGTTGCCGTTGCCCGTGCCTGTGCCTCAGCGGCTGGGCGTGCCGTCCGAGCGGTTTCCGCGGCCCTGGTTGGTCACCACTTGGGTGCCGGGGGAGCCGGGCGATCGGGTTCCGGCTACGCGGGGCGAGGAAGCGGCCGATGGTTTGGCCCGGTTTCTCAGTGCTTTGCATCGGGTGGCTCCGGGTGGGGCGCCCGCCGGGCGGGGGCGGGGCGGGCCGTTGGGG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [23.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 99552-98731 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB891769.1 Streptomyces sp. LaPpAH-165 B070DRAFT_scaffold_15.16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 99551 29 100.0 32 ............................. GTCAAGGCCGTGCGCGTCGAGCCCGCCTACCT 99490 29 100.0 32 ............................. CGGATCGCGGCGGAGGAGAAGGTGCGCGCCCA 99429 29 100.0 32 ............................. GTCGACGGTGAGGTGGGCGGGTGCGCCCGGTG 99368 29 100.0 32 ............................. CAGATCCGTCCGCAGCGGGCGACGCCCAGCGT 99307 29 100.0 32 ............................. GAGTCGGGCAACTGACGGCGCGCAGCTTCCAG 99246 29 100.0 32 ............................. GTCTGCCGGTCGGACGCCTTGGCGACGAGACC 99185 29 100.0 32 ............................. AACAGGGGCGGGGTGGGTAAGAGCGATCTGAC 99124 29 100.0 32 ............................. AGCACTACCTCGTCCAGCCCCGAGCTGTAGCC 99063 29 96.6 32 ..........T.................. GCACCACTCCGCATCGAACCCGAGGTGGGCAA 99002 29 93.1 32 ..........T..............C... GCGGCGAAGGGCCTGGTCAAGGCGCTGGAGGG 98941 29 82.8 32 G.........T.......A.A....C... TTGTCGTACTGGCCGTCACGGAGGATCGCGTG 98880 29 82.8 32 .C..........T....C....A..C... GCCACGCTGCGCCGTCACGGCATCACGCCCGT 98819 28 82.8 33 .C.T........T.......A....-... GATGGCCGACACCGTCGTGATCTACAGCCAGAA 98758 28 82.8 0 ...T..........T........CC-... | ========== ====== ====== ====== ============================= ================================= ================== 14 29 94.3 32 CTGCTCCCCGCACGCGCGGGGATGGTCCC # Left flank : GGTGGTCTTCTTGTTGGTCGCCTGTACGACCTGCGAGGGCGACGAGTCGGCCCTCTTGCCCGCCCCGGAGGGCTTCGCGTCCTTCGCGGCATCGCCCTTGTCGTCCGACCCGCATCCGGCAAGCGCGGCAACGGCCAGGAGGCCCGCCACTCCGTACGCAGCCACCTTGGTCCCCCGGGTCTTCACGTTCGCCATCACTGCAGCCTCCCCAAACCGAAACCGTTACGTCAGGTATGCGCCCGGTGCCCGGAAGGTGATCCCGCATGCGAAGCAGCTGCCGTTCTACGCCAGCCGCAGTAGTTCGCGTCCAGCCGGGCTTTCCGATGCGCGCAGGCGTGGGGAGGCTGGGGGCGCACTGGGCGAACGGGCAGGCTATCCAGAGGCGTTGGCGTACCCTTGCCGCGCATGCCTGACGTGTGATTGTTGAGATGGATATGCCGGACTGTGTAAAAGTGGTCAGAAACCGCGCCTTGACTCGATAGACCCGCAGGTCAGCGAGT # Right flank : ATGCAGCGCGGAGCCCTTACGCCCTGTGGCCGTACATGCGCCCCCGCAGCCCCGCTACAGCGCCCAAGAAGGCCCATCCGCCTCCCCGTACCAGACCCGCTGCCCCGCCGACGTCACCGTAAGACCGAAGTCCTCCCGGGCGGGGACCCCGTCTGGGAATACCGTGGCCAGCTCCTCCACCGCGTCCCACAGGCGCCGCGGTCCGATCTGCCGCACCCTCCCCGACGCATGCAGCGTGGCCGTGGAGCCGTCCTCCGTCCAGAGGCCGACCCCGGTGACCTCACCCTCGTCGTTGCGCCAGGAGCACGAGCGGTATCCCGGAAGTGCCAGGGACAGTGGGAACTTCAGCCGGTCCAGTACGTCCGTCACGGGCACCGACGTGACCGTCCCTGCCTCCGTCTCCAGCCCGGCGAAGTCCGGGGACTTTGCGGGCTGGCGGCGCGGCATGAAGTACGCGGGTTCGGGAAGGAACCGCCCGGTCGCCTCCCCGGCCTCCGCGA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [22-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 101152-100820 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB891769.1 Streptomyces sp. LaPpAH-165 B070DRAFT_scaffold_15.16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================ ================== 101151 30 100.0 31 .............................. GAACGGGCCGCGAAGTCACGCTCCTCGGGTC 101090 30 93.3 31 ............................TC ATGTCCGCGATCAAGGTCCGGAAGTTCACCA 101029 30 100.0 32 .............................. TGACGACCACAGCCCAGCCCACGAGCGGGAGG 100967 30 96.7 27 .............................C CATGTCGACCGTGCCGACGAGGCGTAC 100910 30 100.0 31 .............................. TCAGCTCCCAGAACCGGGACAGCCGCCGAGG 100849 30 86.7 0 .............AC..........C...A | ========== ====== ====== ====== ============================== ================================ ================== 6 30 96.1 31 CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Left flank : ACGCGGCGCGGGCCCTGTCGGCAGCCGACCGCTTCAGCCCGCTGCCGTTCGCGTTGGGCCTCCGCGTCCCCGCGTGCACGTACATCGCCGCCGAGAAGGTGCGGGGCGCCCAACCTCACTGGTTCTACAGCCGAAACGACCGGTCCTGGGCGTGCGTCCTGGTGGAGGACGGGGAGCCGACGGCTCGCGTGTGGCAGCGGGGTGAGCGGCGGTTGTGGGATGAGGTGGAGGGTGCGTATGCGTGGTGGGTGGGGAGGGGCAGGCCGGGGTGGGAGCGGTTCGGGGTGACGGTGAGGAGGGTGGGGGAGCGGGTTTGGGTGGGTGAGGTGGGGGAGCGGGTGTGAGGGGGCGGGCTGACGGGAACGGGCCTGCTTGAGCTGGTGGTTGGCCTACACTGCGGGGTGTATGCCAGCTGTGGGGCTGTTGGGGTGGTTATGCCGGAGTCCGCGAAAGTGGTCGGAAACGCCACGCACTCGAGGTAAACCCGCAGGTCACGCGGT # Right flank : CCTCCAACTCCGCTCTTCGCTGAGGGCCCCACCGCGCCCGGACGAGGTGGGGCCTTCCGCCGGACAGCGCGTTGCTCAGGACCGCTGGCCACCCGCATGCTTGACGACCTTGTCCGTCACGTCGACCGTGTCCCCGGCGGGAGGCGCGTCGACATCGACGTCGGTTCCGAAGTCGCTGAAGTCCATGACGACCTTCGCCTTGCCCCGGTTCGCCGAACCGGAGTCCTTCGCGCCCCCGGCCGGCTGCGCGGCGATTTCGATCTGCTGGCGGCGCATCAGTCCCTTGCCATCGACCCACAGGTCCACCGGCACCGTCTCGCCGAGCTGTTCGCGCAGCTTCCGGGCCTGCGCGGCGTCGCCCTTGGCGAGCTTGTCGATGTCCAGGTCGACCTTGTAGTGGGTCGTCGCGACACCGCCCAGGTTCTCCGTACCGACCTTCTTCACGTCCTTCTCGGACAGCGACTTGGAGTAGGCGAAGGAATCGGTCGGATCGCTCACCT # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:-0.02, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCGCGTGCGGGGATGGTCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCGTGCGGGGATGGACCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 105398-104944 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB891769.1 Streptomyces sp. LaPpAH-165 B070DRAFT_scaffold_15.16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 105397 29 100.0 32 ............................. CACGGCCACGCCGCGAGTACGTACGAGGTCTT 105336 29 100.0 32 ............................. ACGTACAAAGAAGGCCATTACGGCCTTATGCA 105275 29 100.0 32 ............................. GTCTCGATGACGCCGCGCTGGAGCTGGGTGGT 105214 29 100.0 32 ............................. AAGAACCCGTCGAGCTTCGCCCAGTCGATCGG 105153 29 100.0 32 ............................. TCGGGGAGCTTGGGGGCGCCGAACGCGCCGGC 105092 29 86.2 31 ...C.............A....C..C... CGAATGGGCGACGACGCGTTCCTCGTCCGAG 105032 29 89.7 32 ..C.....T........A........... TTGAGCTACAACCCGCCGTACCAGGCCGGTAC 104971 28 93.1 0 ...C.....................-... | ========== ====== ====== ====== ============================= ================================ ================== 8 29 96.1 32 GTGTTCCCCGCACGCGCGGGGATGGTCCC # Left flank : CTCGTAGAGGCTTACGGCCCCGCGCCCACCCCAGGCGACGAAGGCGTCGGGCTCGTGATCGTTGCCGGGGTGCGGGAAGGAGACCTTGAGCACGGCGGGGGGCGTGTGGTCGCGGCGCACGGGGAGGATGAGGCCGACGCCGCCGTGGGTGAGGGGGCCGTCGGGTGTGCAGGCCCACTCGTCGACCAAGGCGCCGACGAGCGCGGGGAGTTCGCTGAGCCAGGCTGCTCCGGCGTCGCCTTCGCGCTCGACGGTGGTCCGCGCGAACTCCTCGGGAATCACGATCATCCGGGCACTGTACGTGGGGCGGGGCGGGGGTGGGCTGGGGTTTACGGGGCGGCGGGTGGCTGTTGCTGCTGAACGGGGGGGGGTGTGGGTGGGGGTGTTGGCCTAGGGTGGGGGTGGGTGGGTGTTGTGGGGGCGTTGAGGGGGATGTGCCGGAGTGTGCGGAAGTGGTCAGAAGCAGCCCTGACCCGTGGCCAAGCCGCAGGTCAGGAAGA # Right flank : GCCGTTCGCCAGCCTGCTGCGCCTGACGCTTGGCCCCGCTCTCCGCGCGGCCCCAAGGCCGCCCACGTACCCTGGCCGCCATGTCCGCCCACCCCGAACCCCTCAGCCTCCGCCCCCTCGCCTTCACACGCGACGAGATCCGCGAAGTCGTCGCCCTCTACGCCGGCAACCCCGCCTACTGGCGCGCGGCAGGTGAGTACGACCCCGGGGACATTCAGGCGGAGGCGGTTGAGGCCGATCTCAGGGCGGAAGTCGCTGTGGAGGGCGGCGAGGTGTTGGTTGGCCGGGATGGGGAAGGACGGCTCGTCGGGGTCGTTTGTCTGCTCGGCCGGCATCCGAAGGACGGGCTGCCCTGGATCGGGCTGCTCATCGTGGACGGTCACTCCCGCCGTACGGGAATCGGGCGGCGGCTCGCCGGGCTGGTCGAGGAGCGGTTCCGGGGCGAGGGGCGGAGCGGCATCCGGCTCGCCGTGCTGGAGAACAACCCCGACGCCCTCGCC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACGCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCATGCGCGGGGATGATCCC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [21.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //