Array 1 17327-16961 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWZ01000021.1 Streptococcus canis strain TA4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 17326 32 100.0 35 ................................ AACACGATAAAGAATATCTTAAAAAAATAAAAAAA 17259 32 100.0 34 ................................ TCTTACAACTACTACGACCACGCAGCTTCCGCTG 17193 32 96.9 35 ......T......................... TTTTTGTTTTGATTACATTCTCGGTATGTCTATCC 17126 32 96.9 35 ......T......................... ACCCTTTAAGTCTTTTATGGTAACAGTTACCTTAC 17059 32 100.0 35 ................................ ATCAGTTGTTGTGCTACCTTTTGGTGCAGAAGCCT 16992 32 75.0 0 ......T..G...........AC...A..CTC | ========== ====== ====== ====== ================================ =================================== ================== 6 32 94.8 35 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGGGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGTC # Questionable array : NO Score: 9.00 # Score Detail : 1:0, 2:3, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : GTCTCATCCTTCATGGGTGAGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 21375-21872 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWZ01000027.1 Streptococcus canis strain TA4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 21375 36 100.0 30 .................................... TTTGCGCTTTGATTTTTATTTTGAGAACTT 21441 36 100.0 30 .................................... ACCCTCTTGAAGAGTCAAGAACAATTAGCT 21507 36 100.0 30 .................................... TTAGTTCTAGTTCGTTCATAGTGTCCTTTC 21573 36 100.0 30 .................................... AATTGTCTGTGTAAACATCCTCATGCACAC 21639 36 100.0 30 .................................... TGGAAAAATGATGAGTGTGGTAGGTTGATT 21705 36 100.0 30 .................................... AGTTTAACAAAATATAAGATATGTGAAACT 21771 36 100.0 30 .................................... GGAAAGATTTAGCGAATTAACATATTACTC 21837 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : TTAGCAGCCACAATAACGGAATTGATTGCTTATGAATGCTTAGAAAATGAGTTGGATTTAGAATACGATGAGATCACCATTTTGGAACTGATAAAAGCTCTGGGAGTCAAGGTTGAAACACAAAGTGATACTATCTTTGAAAAGTGTCTTGAAATTTTACAAGTTTTCAAATACCTTTCAAAAAAGAAACTTTTAATTTTTATTAATTGTGGTTCTTACCTTACAAAAGAAGAATTATTGAAGATAAGAGAATATATTGACTTGTCTCAGCAAACAGTTCTTTTTATAGAACCAAGAAAGTTATACAATATTCCCCAATATATTTTAGATGAAGATTATTTTTTGATAAAAGAACATACAACTTAGACTACATTCGTAAATGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : ATCAACCTGTCTTAAATTTCTTTCTGACATGTTTTAGTGAAAAGGCAACACTTTTCTGTACAGATTTTATAAAGTGCTTTTTCTAAACGACTAAACGTTTGGTCATCGGTGTTTGGTAGTTGAGGCAGCTGTGAATGCGGTGGTGATTCCACCAGTGGACATAGTCCTTAGTTTTGAGGGCCAATTCTTCTAGCGTCTGGAAAGTTTCCTGGTGGACAAATTCCATTTTGAAAGCACGATAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 98887-98587 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWZ01000006.1 Streptococcus canis strain TA4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 98886 36 100.0 30 .................................... TCAATATTTTTTTCAATGGTAAGATCATTC 98820 36 100.0 29 .................................... GAGCGGGGCCACCGACCTGAAGGCTATCC 98755 36 100.0 30 .................................... CAGTTCTTTTTGATCTTTAGTTAAACTTAT 98689 36 100.0 31 .................................... TCACACTCAAAGTTTACGCTCATCAGATAGA 98622 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : GTCGGTAATGGTTGGGCTTATGTTTGCTTGATTATTGACCTCTTCAATCGTGAAATCATCGGTCTGTCAGTTGGTTGGCACAAGACCCCCGAATTGGTCAAACAAGCGATTCAGAGCATCCCTTACGCTCTGACCAAAGTCAAGATATTCCAGTCAGATCGTGGGAAGGAGTTTGATAATACTTTGATTGATGACATGTTGGAGGCCTTCGGAATCACCCGCTCTCTTAGTCAAGCAGGTTGTCCTTACGACAATGCCGTTGCTGAAAGTACCTATCGTGCTTTCAAAATGGAATTTGTCCACCAGGAAACTTTCCAGACGCTAGAAGAATTGGCCCTCAAAACTAAGGACTATGTCCACTGGTGGAATCACCACCGCATTCACAGCTGCCTCAACTACCAAACACCGATGACCAAACGTTTAGTCGTTTAGAAAAAGCACTTTATAAAATCTGTACAGAAAAGTGTTGCCTTTTCACAATTTACCTTTGTACTTCCGAA # Right flank : AGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAACC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 218017-218316 **** Predicted by CRISPRDetect 2.4 *** >NZ_BEWZ01000010.1 Streptococcus canis strain TA4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 218017 36 100.0 30 .................................... TTTTCATTATCAATAAATGCCACCTTTTTT 218083 36 100.0 30 .................................... AATTCTAAAAATTTGATTGCCATAAGGTGT 218149 36 100.0 30 .................................... GATAGCAGTACCGCTGACAACATTGTTGGC 218215 36 100.0 30 .................................... GACTACAGGTTTTGTAGCGCTAGGGCTAGA 218281 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : TTGACAATCAATGAATAGGTTACACTAAACTAGACAGTCTTATAAAGTGTTCTACACTAAAGAAAATAGGAGAATATTATGTCTAGAAAAATACGTCGCCACTTCGCCGACGACTTTAAGCAACAAATCGTTGACCTTCACAATGCAGGGATGAAACGAAGTACGC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //