Array 1 48-3844 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHONW010000049.1 Odoribacter splanchnicus strain DFI.3.53 AMIHOMIN_49, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 48 30 100.0 37 .............................. ACGGATGAAATTCTTACTAATGGTACTTACAAGCCGG 115 30 100.0 36 .............................. TTGCAATGATAACAATAGCAAGAATAAAACAAATCG 181 30 100.0 35 .............................. TCTGTTCTTACCGAAATATAACTTTCGGAATTCCA 246 30 100.0 36 .............................. TTTGTCATGTTCGGCGCAATAATCAACAATCCTCTT 312 30 100.0 37 .............................. TGTTCTGAATGATGCTTTGGTTGAAGATGCGGCACAA 379 30 100.0 36 .............................. ACCTTAACAGAAATTTTTATTAATTGCTTTTCAGGT 445 30 100.0 37 .............................. TACACTATTTCCTACACGAAGAATGCAAATATTGCTT 512 30 100.0 36 .............................. ATTGGGTCTCATAACACTCAAACGGAATAATATGGA 578 30 100.0 36 .............................. TTTACTTGGTATTTGTATTGGATATGCGAGCGAATG 644 30 100.0 36 .............................. TCTTTCTTCGTAATTATTGTTTGGACTCTACATTTT 710 30 100.0 37 .............................. TACGCTCGAGCCACCGTTACTCCGTCCTTTGTCACGT 777 30 100.0 36 .............................. ATCCATTTGCCTGAATAAACTAAGAATTCAGTATTC 843 30 100.0 36 .............................. TTCTGTTTTTCTGCCCTGAATATCTTTAAGAAATCG 909 30 100.0 36 .............................. TCTGATGAAATGATGGATACAACTATTTCTGATTTG 975 30 100.0 36 .............................. GAGTTTTAACAGTGCTTGGGTGTGTGCCGTACACGG 1041 30 100.0 36 .............................. TTATGTTATTTGTATATTTGCCAACAGTGTCGTAAC 1107 30 100.0 37 .............................. TTTTCTCCTAATACCGTTTAATTTTCATTAACATTAA 1174 30 100.0 36 .............................. TAATCTGGAACATTAAAGTTACTTTTAAAAGTGCTT 1240 30 100.0 36 .............................. TTTTTTAATGGTGAGGTAGTAGGTAGTTTAGGGTTA 1306 30 100.0 36 .............................. ATTTGAGGTAAAGGATTGTGATTGTTGAAAGTATGT 1372 30 100.0 36 .............................. AATGTAGGGTGGACATAACTAAATTTGTCAAGACCC 1438 30 100.0 35 .............................. TCGGTGACTACTCCCATCTTTGTCACTTCTTTCCT 1503 30 100.0 37 .............................. AATTATGACAGCAAGTTAAGTACAAAGGAAATAGCCG 1570 30 100.0 35 .............................. TGAAAATATGGAATCTGAAAGTTTTGCTTTTCAGA 1635 30 100.0 36 .............................. ATTGAAGTATTGCTTCCCTTAACTCCTGCTCGTTGT 1701 30 100.0 36 .............................. CAGGCTGCTGGAATGATAAATCGAAACCATGTTCTC 1767 30 100.0 36 .............................. ATAGTATCAGCAATTCTCAAAACCTGCGCATAAATA 1833 30 100.0 36 .............................. GAAGTTCATCTGAGGACATACTTTCGAACGGGCTAG 1899 30 100.0 36 .............................. ACGACTAACAGCCGAGTCCAAACGAGTAAGGTTGAG 1965 30 100.0 36 .............................. TTTTTAGAGAATGCGGGTGATATTAGTGACCACCCC 2031 30 100.0 36 .............................. TCCGTTGATGTAAAACAGTACGAAGGGAACTGTTTG 2097 30 100.0 35 .............................. GATGTTACTGTTCCATTATAAGCAACTCGCTCAGA 2162 30 100.0 37 .............................. ACTACTGTCGAACAAATTCTTGATATGTCGGCTTTAG 2229 30 100.0 37 .............................. TCTTTAAAATGAAGGTTGATGGAGTTTGTGTAGCGTG 2296 30 100.0 36 .............................. GATTTTCGAAGTAAGCCGTACAGAAATGGCTGCTGG 2362 30 100.0 36 .............................. GAAGCTGTTACTGTATTTGTATAATTCGGATAAGGA 2428 30 100.0 36 .............................. AATGATAATTGGTGGTGGACACTTTTACAAAAGAAA 2494 30 100.0 36 .............................. AGATTTAGATTTAGTTGGGTATAGTTGGTTTTACCA 2560 30 100.0 36 .............................. CTCAATTACGAGGCTGTGAAAAAATCTGACTACCGG 2626 30 100.0 36 .............................. TAAAGAGGCTTACAACAACGCCTGCGGGGGTACAAT 2692 30 100.0 36 .............................. GCTTAATCGCTTAGAGGCTCCCGTAGAAAAGTTACG 2758 30 100.0 37 .............................. TATTTATCTCCATGCACTTTTTTTGCTCGCTCAATAA 2825 30 100.0 36 .............................. AGGAGTGCGGGACGTGGTTATATGTCCACGATGAAC 2891 30 100.0 36 .............................. ATATGATTGCGTTACATTTAGGAATATCTGCGGTTA 2957 30 100.0 36 .............................. ATGATCAGAGGCAGATTGCAATAGATGAAGCGGGAA 3023 30 100.0 36 .............................. TTGTTTTCCCACACCCAGGTTCACCTACGAGGAGAA 3089 30 100.0 36 .............................. ATTTTTCTGTCCACGCAGTTTTCATGCGGCACCACC 3155 30 100.0 36 .............................. TTTTTAGTCGGAAAATCTCCTGCAAAAGTTGTCAGC 3221 30 100.0 36 .............................. TTGATTTTGATTGATGCTTCTGCGAGAAGTTCTTTC 3287 30 100.0 35 .............................. CCGAATGTCCTTGATACTTCACTTACCTCGATTAA 3352 30 100.0 36 .............................. CCGGAGGAGCCGATCTTAGCGCCATTGCCGGAGGAG 3418 30 100.0 35 .............................. TCTTCCAGTTCGGCCAGCATGCCGGGAGCGGCAAA 3483 30 100.0 37 .............................. TCAGGGAATCGAAATCAGGTATCCCGGCTTTCGGTAG 3550 30 100.0 36 .............................. AAGTAGACATCGGCCCATTCTTTAAAGTTCGATCCT 3616 30 100.0 37 .............................. TTTTTCCCCATGGAATGAAAACCGGTGGATTCACCCC 3683 30 100.0 35 .............................. TAAACTGTACGATTACGTCCCATTGTTTTCCCTAG 3748 30 100.0 37 .............................. CGTATATGGCTACGTGGTTGGGTACGGTTTATTCCTA 3815 30 96.7 0 ...............G.............. | ========== ====== ====== ====== ============================== ===================================== ================== 58 30 99.9 36 CTTTTAATTGAACTAAGGTAGAATTGAAAC # Left flank : TAGAATTGAAACCCTTTATTCCACGCTTGTATTCCTTTTCTACCTTCC # Right flank : CTGGACTCAACCTGGCATGTTTTTATTAACCGTCCCGGATAAGGGTGAGATTCCGAAATGTCAGTTTGTCGCCGGGGTATTGATCTTCTCGGAACGATGAATATTGGATTGAATATATTGCAGGATATTCAAAGCTCTTTCTTCCGGACATTTATTCATTTGCCGGGGAAGAAACAGGGCGATATTGCGGGCGACAACAATGATGGTGGTATTGATTACCTGGGCGATAATCTTTTTACTGTAGAGATTCCGGTTTACGTACTTCCGGATGATCGTTTCTACCAGCGATTTATCCGTTTTATGGCGTAAAATACAGCCGGGTTGATGATTGGCATGTTATAAAAGTGAAGCACGAAAACAGCAAGTACGGCAATGCTACGATCGGTAATGGTTTGCCGGCGCTCCGGTGTATATTGTCATTTTGTATCGATAAAGTGGTTGGCTGGGTACGGAACCCGGATAAGAAGAACCATGCAGATATCGGTGCGGCGATAGCGGCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGAACTAAGGTAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA // Array 1 53750-55294 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHONW010000031.1 Odoribacter splanchnicus strain DFI.3.53 AMIHOMIN_31, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 53750 30 100.0 37 .............................. TCTTTTCCAATTCAGCCTTCAAATCTGAATCTTCCTG 53817 30 100.0 35 .............................. CCATTAAAAAATGATGGCTCTAATGGTCTAGAAGA 53882 30 100.0 36 .............................. AAAGTTACTTCCGTTCGAGGTAACCAACCATCACCC 53948 30 100.0 36 .............................. TATCTCCAACTCCAAAATAAGGGGTTGCTCCTTCTA 54014 30 100.0 36 .............................. CTGTAAAGAAATACACAAAACAAACTAAATGAAACA 54080 30 100.0 36 .............................. CAAATTATAAAGGAGCGGGAAGAAAATGGCCAGTAC 54146 30 100.0 36 .............................. TGATTACCCGGTATACATAAAATTTGTATTCCTTCT 54212 30 100.0 34 .............................. CGTTGTTCCAACGAATAGATACTACTTTCGTCAG 54276 30 100.0 36 .............................. GATGATTCAGTATGTATTAGAACCCGAAAAGTGGGA 54342 30 100.0 36 .............................. TCTGTTACAGAACTGAATCCATTACTTAATGTTACG 54408 30 100.0 37 .............................. ATGTCTTTTCCTAAAATCTTTTGAGAAGAAAGATTAT 54475 30 100.0 36 .............................. TTTTCAAGCTGAACGGGTTCGAATGAAAATAGCCCG 54541 30 100.0 36 .............................. GAAAGTAAAAACTTTAATCAGTTTTATAATAAACCA 54607 30 100.0 36 .............................. AGAAGTAGGGAATATATCAAACCTGAGAAGGAATCA 54673 30 100.0 35 .............................. TTCATATTTCACCTCTCGAGATGTTAACGTTTAAA 54738 30 100.0 36 .............................. TCTGATAGATGTTCAGCGTCCTAACTATGATGGAAG 54804 30 100.0 36 .............................. TTGTTTATACAAAATACGTTTTATATTTGTAGTGTC 54870 30 100.0 36 .............................. GCGGTCATAACCAAGTGAAGGTTGTTGATGATTTTA 54936 30 100.0 35 .............................. AGTTCCTCATACCCCTCACCATACTGTTCAATAAA 55001 30 100.0 36 .............................. GTAAAATTATGGAAGCCTAAGCATCGGGAAGCGATA 55067 30 100.0 36 .............................. ATCAAACGTCCTCGGGCATAGCCCCCTCCCAACGCC 55133 30 100.0 37 .............................. ATTTGTGGTAAACGCATTTAAATGCGGATGGTTACAA 55200 30 100.0 35 .............................. CCTTTATTCCACGCTTGTATTCCTTTTCTACCTTC 55265 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 24 30 100.0 36 CTTTTAATTGAACTAAGGTAGAATTGAAAC # Left flank : ACCTTTGAAAATGTGGTGGTAATGTATGTCATTTTAGTATATGATGTCGATCAGAAGCGGACGGCTAAAATGTTGAAATTGTGCCGGCGTTACCTTTCATGGATACAAAACAGTGTATTTGAAGGGGAGATTTCAGAAGTACAGTTGAAGCAATTAACATCGGAAGCCCGGAATCTTATGGATGAAAAGGATAGTTTGATTTTCTTTAAAAGCCGGGACGAAAAATGGCTGGAAAAAGAGATTATAGGAGATGAAAAAGCCAGCGTTTCTAATTTTTTATAGCGTCGACCTTAAAAAAATGATTGGGGGTTGAGAGAGTAATTACAATAGAAATGGAATAATAGTTCTTTGACATGTTGAAAATGAATAATTTAAAAGTTGTTGTCGAAGGTCAGGGTAAATTTAAGAATTGAAGGTCGACTGCAAATGTTTGTAAAAAATGAGAATAAATGGATGATAAATCATTGATTTTGAAGTATATTTGTTGGCGTTTTTAACGG # Right flank : CCTTTATTCCACGCTTGTATTCCTTTTCTACCTTCCTTTTAATTGAA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAATTGAACTAAGGTAGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.30,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0 Confidence: HIGH] # Array family : NA //