Array 1 381348-381672 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134406.1 Arachnia propionica strain NCTC12967 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 381348 37 100.0 35 ..................................... AGAAACTCTTGATGCCACTGATACCTCATTCCCAC 381420 37 100.0 37 ..................................... TCCACCAGCACCGGGTAGCTGGCCAACAGTGCGGTGA 381494 37 97.3 33 .......G............................. CCCCAATTAGGCCCAGCCCTACTACCAGGGCAA 381564 37 100.0 35 ..................................... GTCCTGTGTCTACCAGGTAAGCCGCATACACAGGC 381636 37 83.8 0 ....................C.......A....GGTA | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 96.2 35 GTCTGAAACCACCGCGAACCTCAAAGCGGATTGAAAC # Left flank : GCCTACGGGGACCGCATCCAGTACTCCGTGTTCCTGCTCGGCATCACCCCGGAGGAACTGGTGGAGATCCAGAGCCGGGCAGCCGGCATCATCGACGAAAACACGGACTCGCTGTGGATCGTGAGGCAGTGCGCGGCCTGCTGGGAGGAGGCCCGGACCCTGGGTCAGGCCCATCCACCGGCCCGGGTGCTGCACTACACGGTGATGTGAAGAATCCTGCCGGATCCGCCGACGCCTGGCAGGGCGGGCCGGGAGGCGGCATGAGGGTAGGGTTGAAGGAAGCCGGCAATCCCGGCTGCCCGCAGCCGGGGGTTTTGGAGACACCCTCGGACAGGGGTGGTTGGAGAACGACCAAAAACAGCCTCAGGTGTGTATGCCACTTGACTAGGGGTTTTACCCAATTTAGGACAGGTTCTGTCCGCTTGCTGGAGGGGGTGAGGAGGGGTGGTGTGTAAAACCGCCGCAACAGGGCTTGTCAGGACAGCGTGTCAAGGGGTAGG # Right flank : AAGATTTGGCACCAGTGGCGGCATTTTTGCTGTCATTGATGTCTTCCGCAACTGAGGGTTATTGAACCGATTTGTGGGTTTGGGTGAGTGGGGTGCGTCAAGGTCAGCTTGTGGAATGCTGAGTGGGTAGCCGGTCCGTCAGCCGGGTGTAATCGGGTGCCTTTATCTTGAATCGTGTCCGGATGTTTTGAGTGCCATTCCGTAATTCGTCCACTGAGTCGTCGGCGATGGGTGATGAACTCGGGGCGGCCGTGACATCGCGACAAGGCGGGGTGCGCAGGGCCCTGGCTGTGCATCTCCGGGCGAACGTTCGTGGGGTGGGGGTCCCCGTCGCCCGGCGGTGGTGGTTCGTCGCGACGAGGACGTTTCCCCGGTTTGTGTAAGTGGTTAGATAACGAAAGTTAAGGTGGGCGGGTCGGGGCTTGTCATCCGAATGGCTGGCATTTCGCGGAAACTGACGGCGTCCAGTGTCCGTAGGGCGCGGAAAATCGTGGTTTTGG # Questionable array : NO Score: 5.87 # Score Detail : 1:0, 2:0, 3:3, 4:0.81, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAAACCACCGCGAACCTCAAAGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [13,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-6.00,-6.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 658631-660770 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134406.1 Arachnia propionica strain NCTC12967 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 658631 36 97.2 37 ...................................C CCTTCCAACCCGGCGCCGTCCTCGAGGCCGCCCACCT 658704 36 97.2 37 ...............................G.... ATTGACGCGATTCGGTACGGTCAATCGGGGTAGCGTG 658777 36 100.0 36 .................................... TGATTTCGCATCGCGTTGAGTGAGGGCCTCCAGCAG 658849 36 100.0 37 .................................... GTCCGACCATTCAATCCGTATCCACCGCCTAGAAACC 658922 36 100.0 37 .................................... CGCCCTCCGTCACCCCGGAGGGTCGCTACTGGTGGCT 658995 36 100.0 36 .................................... CATCATCGGGGAACTCGACCTGGTCAAAGTCGACGG 659067 36 100.0 33 .................................... TACTCGGCTACCCCCGAGCGCCGAAAGGCCCGC 659136 36 100.0 37 .................................... TTGAGCTGTTGCGGGAATGGACTCGTGGCTGTTACGC 659209 36 100.0 35 .................................... GCCTACTCCCGCCCCCTGCGGTACCTGCTCAACTA 659280 36 100.0 35 .................................... AAGGCGGGGGCCGCGAGGGAGCGGTGGTCGAGCCC 659351 36 100.0 39 .................................... AGGTAATGACAATGTGGAAACAGGCCTGAACTGGATTCT 659426 36 100.0 37 .................................... CACATCGCCTGTCCAAACTTCCGCCGGAAGGGGCTCC 659499 36 100.0 36 .................................... GGCCTTGATGCTGCGCACGTCGGACAGCAGGTCCCG 659571 36 100.0 37 .................................... GGTCGGCGGACATACCCATTCCCTGGGCAGTCTTGAT 659644 36 100.0 38 .................................... GCTCACTGGTCCCCCTTGGGGGCGTCGAGGTAGTCGGG 659718 36 100.0 36 .................................... GGGAGTAGTAGGCGAGCAGGGCGTCGGTGACCTCCG 659790 36 100.0 37 .................................... GGGTCGGGACGTCGCGGAGTTGCTTGATCCTGAGCAG 659863 36 100.0 37 .................................... GGACGACGGCACCAAAGCGCATCTGATCCTCGACATG 659936 36 100.0 39 .................................... GGCGGGCCATCACCGCACTCCAAGAAAGGAACACCGCAT 660011 36 100.0 36 .................................... CCGACGGGTCGCTGGAAGGTAGGGCGGGTCGAGGTA 660083 36 97.2 37 ................G................... GGAAGGAAATGGGCACCACCCTGCCCGGGCAGCTCGA 660156 36 100.0 36 .................................... GGTGTTGTCGGTCGGCAACTGGTACTTGCCGACGAT 660228 36 100.0 39 .................................... GCAGCACCATGGTTCACCGCCGGGCGGAGGGGCCCACTG 660303 36 100.0 38 .................................... GTTCCTCGGTGCTGCCATGACTCTCATCATCCTTCCCA 660377 36 100.0 35 .................................... GTGGAGGCTGAAACGATGAAGGAGGTGGGTCTGAA 660448 36 100.0 37 .................................... CCACGCCCCATTGTATCTCACCCCAAGGAGTCCCCAT 660521 36 100.0 36 .................................... GGCGCACGTCAGGATCTCGCCGGGAACCAGTAGCAG 660593 36 100.0 36 .................................... CTCCGGCCTGTGGTCCCGCTGGGCCAGCGTGGACTT 660665 36 97.2 34 ...................................C ATCAGCAGCGATGTGACATACACGGCACCAGCAG 660735 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 30 36 99.6 37 GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Left flank : TGCCGGCCATCTTCCTTCCCTCGTCGTCCCGGGGAACGGCAGCGGAAGAGGTCGTGCAGCCCCAACACAGCCTGCAACCAGGGTTGCGATGCGTCGGCCAGCCCAGCCCGATCGCTTTCGGCATACGATCCGGTGCCGTGGTGGGGCGAGAGACACGGAGGTGTGGCCCCGCCACCGCCGTCATCGTGCCACGCGGGCTCAGCTGTGTATTTTGCTCCGCCGTGACCCGGCGAGATCACCCTGACCGGCGGGTCTTGGTGCTTCCAGGAGCGTTGCGCAGTGCCCCGTCTGTTCATCGAAGTCAGGATGCGATTCTGACGAACCAAGACCGCTTATCAAACAAACATAGCGGCAATTGAGAACGATCAAGATCGACAGGATGGATTCATGATGGAACCTTCAAGAATCTGTGTATGGATGACGTGGGGAAGTATGTAGAACCTGATCTTTGAGATCAGGAAAATCGCGACCCATAGTTTCGTGCCGTACCCCGCTTATTT # Right flank : GGCTCGCGATTTCTTTGGTCTCTGACTACTAGTATTACACGGGTCTGCGAGCGCCGACCAGCTGGGGCGTGCGTGAAGGGTTGTTCGTTCTCCGTAAGTGGAGTGAAACCTGCTCTGACTAGGGTGCGAGCACTCCCCAGGGGTTTGGTGGGTACCGGAGCGCTCGCGTGGTAGCTAGACAATCTGCGGCCCTCTGGTGGGTAGGTCCTCGTGGTGCCCGACGAAGATGAACCGATCCTCGCCGATCTCGCCCAGGTCCACGATGACCACCGAGTCGACGGCCAAGTTCATGATCTTCTCTCCAGCTGCTCTCAGGTGAATCAGCTCAGACCTGTTGAGGTCACAGATGAAAACGGAGTACTGGAGGCGTTCTCCATGGGCCTCCATCAGCTTGCAGATTCGCCGCAGTCTTCCGGGTTCACGGATGTCATATGCCACCAGATAGCGCCGCCTCCGTGTCTTCATCTGGTCACCATCGCAGTGTACTGGTCCAGTTCGCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCAATGGAGCCTGACCTTTGAGGTCAGGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 3 2897234-2898080 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134406.1 Arachnia propionica strain NCTC12967 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2897234 36 88.9 37 .C.......G......A..C................ GCTGTGTCTGCTGAGCAGGCGCAAGCCAAAACCGTCC 2897307 36 97.2 37 ................A................... TCTACGGCGACAAGTACCTTGACGGCTACATTGCTGC 2897380 36 100.0 40 .................................... TTGCCCCGGTTGGGTTCAGGTTGTGATCCAGTACTTTGGC 2897456 36 97.2 38 ..................T................. GCAGTCGGCAATCCACCATACTTCCGGAACCGTTGATA 2897530 36 100.0 38 .................................... GCCGGCGTACATGCCCCCCAGCCCTCAGGACATTGTCC 2897604 36 100.0 39 .................................... CTGCCGTGGAAGCACTTCGTGGCCTGTCGCTCCCCTGTG 2897679 36 100.0 38 .................................... GCCGTCGCTCGGGACGTCGAGAAGGGCTTCATCGTAGG 2897753 36 100.0 39 .................................... CCAGTAAGTACGCTGACTATGAGGAGGTGCGGGGGTGAC 2897828 36 100.0 37 .................................... CAAGCAAGCCTATGACTGGTACAAAGAGTACGTGGAC 2897901 36 100.0 36 .................................... ACGCATATGTGGCGGCACAGGGATGCTGCGCTGGTT 2897973 36 100.0 36 .................................... CGGCTGGGAGGCCCTCAACATCCCAGCCCAGTGCGA 2898045 35 75.0 0 ......................-T...T..CGTTTA | G [2898072] ========== ====== ====== ====== ==================================== ======================================== ================== 12 36 96.5 38 GTCTCAATGAAGTCCGGCCTAGAAGGCCGGAACAAT # Left flank : TCCAGGAGTGCCTGATCAAGCATCACGAGATCCGCATCGAGCACTGCACCCTGCAACTGGAGTCGGAAAAGGTGGCAGAAAAGCACAAGGAGCACCTGCACGCGTAAGACGAACAGGGCCAGCAGGTCGCGATCCCATCGCGAGAGATTTCACGAAATTTGTTCATGCCCATCCTCAAGCCCGCCTAACCAAGGGCGTCAACCGTCGATGAGCAACCTGTAGAAAAACATCAGGGGGATCACTTTCACCCACACCTGCGAACAAGATTTCATATTTCGCATAAGAATCGCCGGGGAAACCGCCGACGGAGCAAGACCGCCGTTCTGGTTTCCCCGGCGATTAGTGCACAAAGGGGTAGGCGACACCGCTCTCCCAAAGAATGCCCACCTTGACAGTAATCAAGAAGCCACGACAGCTTCGCTTCAGCTTATCGACGGAATCCACCCTAGAAAGCCGAAACAGCCCGCGGCGCGGAAACAAGCACTGAACCTGACCTGATG # Right flank : AAATAGCTTTACGGTTTGGTGGGATAATGAAGCATGGCGAACAAACCAGCCCCGGCCCTGCCGCTTCGTGATGGTGACCAAGCGATACTTGAGAAGGTGGTGCGTTCAAGCGCCACAACCGCAGGGGCAGCGCAGCGGGCGAGGATCGTGTTGCTGGCCTCCCAGGGAGTCGCGAATGCGTTGATCTCTGAGTTGGTGGGGGTGTCTCGACCGACGGTGAATCTGTGGCGGGGCCGCTACCTGGAACACGGTCTGGAGGGGCTGGTTGACATCCCACGTCCAGGCCGCCCGAAGGTGGTTGATGATGCAGCGATCATCACCGCAACGTTGAGGCCTCCCCCGAAGCGTCTGGGGGTGACTCACTGGTCGAGTCGGCTGCTGGCTCCCCGCCTGGGGGTGCACAAGTCCACGGTCACCAAGGCCTGGAAGAAGTACGGGATCCGGCCATGGAAGGCCGACACGTTCAAGTTCTCCACCGACCCGGAACTGGAGGCCAAGGT # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATGAAGTCCGGCCTAGAAGGCCGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-14.40,-14.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [6-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 4 2899244-2904609 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134406.1 Arachnia propionica strain NCTC12967 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 2899244 36 94.4 35 .........A.............A............ CTGCTGGTTGGCGGTGTTGTACGACTTCCACAGGG 2899315 36 94.4 37 .........A.............A............ TGTTTCAGATCCTGTCTTGACAACTTCTCAAGGGACT 2899388 36 88.9 36 .........A.A...........A.T.......... GTGGTGCATGATGCGGATGCGGCTGGTGATCCAGTC 2899460 36 94.4 39 .........A.............A............ GTGGGTTGACGCGGAAATTATGGTCCGCGATTACGTTTT 2899535 36 91.7 36 .........A.............A........T... CCACGCGGATTCGTACCCGGAGCCATTGCCGGCGCA 2899607 36 94.4 37 .........A.............A............ CATGATGTCCGCCATCATCGACGCCTACAGGCGCGGT 2899680 36 91.7 39 ........AA.............A............ CGGCGCTAACTGCAACCCCGCATTGAAAGAAAGGATTGG 2899755 36 94.4 37 .........A.............A............ CCAATGCAACCAAACCAAAGGCACCCGCACCCTCAAC 2899828 36 100.0 36 .................................... AGCAACCAACCGGAGCTGGACCTGTGGGGACTCCCT 2899900 36 100.0 37 .................................... AAGCCGAGCACTGGTACAACAACCGCGAGTACGGTAC 2899973 36 100.0 37 .................................... GAACCTCCACGTTTTGGGTCCTGATAGGAATTACTAT 2900046 36 100.0 38 .................................... GAGGGGTGCATCAATCGGATTCAGGATGCACACGAGCG 2900120 36 100.0 37 .................................... TCAAGTTCGCCACCCACCCCTATTCTGCGTTCGAACT 2900193 36 100.0 37 .................................... ATCAGCCCTCAACGGCCTTGCGCAACTTGGCTTCACT 2900266 36 100.0 35 .................................... CGCGAAGCCCACGCCAACGGCCACACTTGGCGTTC 2900337 36 100.0 37 .................................... GGGCGCGGCAGATCTATCTGGTGTCGCGTAACACCAA 2900410 36 100.0 40 .................................... GTCTTCGGTAAAGCCTATCAGACCGAGGAAGGTATCTGGA 2900486 36 100.0 36 .................................... GGCCTTCATAATGTCAATCACCTTCACCGCGGAATT 2900558 36 100.0 34 .................................... GCGGCCCGGCATGATGACTGTCAATGATGCCAAC 2900628 36 100.0 36 .................................... CGAGGCCAAAGTCATCGTAGCCTTCCCTGTATGCGT 2900700 36 100.0 36 .................................... CCCCCATGTTGCCGACCTTCTCGCCGCCGGCGCGGG 2900772 36 100.0 37 .................................... ATGTTCATCATATGAACCCAATGGACGTCCAGATGCT 2900845 36 100.0 36 .................................... GTACGCGAGTTTCTGGCACGTCCCTGAATGGGCGGT 2900917 36 100.0 37 .................................... TAGCCCCAACAGCCTGGGCGACCAGACCGAAGACTGA 2900990 36 100.0 37 .................................... ATGAGGGTCGGTGGCACGCTACAGGCGCTCAATTTGC 2901063 36 100.0 37 .................................... TGAAAGACATGCCCATCGCGTATATTCGTCGCCCGCC 2901136 36 100.0 36 .................................... TCGTAAGGACTTTGACCTCCGCCTCGACGAAATCGA 2901208 36 100.0 38 .................................... GACGCCGAACTGCTGTACGTCCGCGCCCTGCAATACGC 2901282 36 100.0 38 .................................... CCCTCGCGGAGGCAATTCGTTTCTCCTTGTGCTCACGT 2901356 36 100.0 37 .................................... CCACGAACGTCGTGAGGAAACCCGAACGGAGACTCCA 2901429 36 100.0 37 .................................... GGGGTCCTTGCTCATGGGGCCGGTCCCGAAGGTCACA 2901502 36 100.0 37 .................................... GCCTATCGAGAAGTGTTTGGGAGGCCCATGTCAAAGT 2901575 36 100.0 40 .................................... GGTCACAGTCAAGGGCCTTGAGGCTTTGGGTGCCTGAAGC 2901651 36 100.0 36 .................................... AGGATTGTAGCCGGTATATGTACCAATGATGTCACT 2901723 36 100.0 35 .................................... GAAGCACTGAAGGCCCATATCAAGGGCCTGAATGA 2901794 36 100.0 40 .................................... CCCTGTTCGCCGAGGGTATTTTGGTTGACCCTTATTGGGT 2901870 36 100.0 37 .................................... ATTCAATCAATAAATTGCAGGGCGGTGCAAGGGATTA 2901943 36 100.0 37 .................................... CCTCTCGTACAGCGATATTTACGACTTCTCAAGTGTC 2902016 36 100.0 37 .................................... GTTGGGCAACAAAATCAGAAAGCCCGGTGTCCGAAAG 2902089 36 100.0 36 .................................... GGTCTTTGTGACGTTGATAAGGACGTCACGCCTGAA 2902161 36 100.0 36 .................................... TGATTCTTGATTCGTAGTGCTCACTGACTACTTCCT 2902233 36 100.0 37 .................................... AGAATATCGATTGGCCCGTGCCGTGAGCCAGCTTAGC 2902306 36 100.0 36 .................................... TATCCCTCCAACTCCGCGCACCGTTATTTTTCCCGT 2902378 36 100.0 37 .................................... TCGACATGTCATCAAACCCACAAACCCACAAATCAAC 2902451 36 100.0 36 .................................... AAGCAACCTCGGACGGCCAAAGACGTTCCGACATGT 2902523 36 100.0 39 .................................... ACGAACCACGCGACAACCGAACGCGAACCCCCTCACGGT 2902598 36 100.0 37 .................................... TGAGGTATTCGGTGGCGGCGAAACGAGAATTGTTCTT 2902671 36 100.0 37 .................................... GGACATTGAAGCCGCATTCGACGCCCTGTCGACAGCA 2902744 36 100.0 38 .................................... GGGACTACCGTGGCAAGCTCCTTCCCGATCACCGAAGG 2902818 36 100.0 36 .................................... ATCGTCAAAAACCCATACCTGTGCCTTGTTGTGATT 2902890 36 100.0 37 .................................... ATGATCTTCACAAGGAGTTGAATGAAAATCCCGTGTT 2902963 36 100.0 37 .................................... ATTCCTGGCGGAACTGGCTTGTTGAACAAGGTTACGT 2903036 36 100.0 37 .................................... GAACGTGCGGGTGAAGACCGTTGACCAGGTTGCCGTC 2903109 36 100.0 40 .................................... TCGTGTCCACCATCTACATTGATGGGGCCCGCCCCTGGGC 2903185 36 100.0 36 .................................... GGGTCCGATTTGGTTGAGTATTTTTATGACATCAAT 2903257 36 100.0 37 .................................... ATATCAGCCTGCCGGCCCGTACCCCGTACCATTGCAT 2903330 36 100.0 37 .................................... CGTACATGTACTGCCACGCCCAGAAAGTCCTCGTGTC 2903403 36 100.0 39 .................................... CCGCCACTGGATAAGAAGAAAATGGCCGGTTACACGAAC 2903478 36 100.0 39 .................................... CTGGCAAACGGACCAAGCAGACATCCCTCAGGCCATCAG 2903553 36 100.0 40 .................................... CTGTAGAGGCCGTTGCTCGCCTGTATGGTTTCTCCGAATC 2903629 36 100.0 37 .................................... ACGCGCAGTTGCTGAATGAGTATTTTGAGTCTTTCGT 2903702 36 100.0 36 .................................... GATTCCCTTGTCGTCCTCCGTCACGGTGTGATGAAC 2903774 36 100.0 35 .................................... GAACCAGGACATGGGCGACTATTTGGTTCGTGCAA 2903845 36 100.0 37 .................................... AGTGTCCCACTTGTCTATTGCAGCCTTTGCTTTCGTA 2903918 36 100.0 38 .................................... CCTCACCAGCGACGCCATCGGCTTCGGCGACCTTGACC 2903992 36 100.0 35 .................................... GAGGTATCAGTGGTTTCCTTGTGAGTGGGAGTCTT 2904063 36 100.0 38 .................................... AAGTTGATCATATTGATGGAATTAAAGCAATTGAGAAA 2904137 36 100.0 36 .................................... CTGTGGGCCTCCCTACAGGAGGCCACAGAGTTCCGT 2904209 36 100.0 37 .................................... CCGAGGCAGACCTCGTCCTTGAACGGCTGATAGACCT 2904282 36 100.0 38 .................................... TCGTTCGGCACCGCCGACGCTATTTCTTTCAGAGACGG 2904356 36 100.0 37 .................................... GAACCGCACATCATGGCCGACCGTGGCGACAAGAACG 2904429 36 100.0 37 .................................... CGAAGTATCAAGGCGCAACCAACGCCCAGATCATCAA 2904502 36 100.0 36 .................................... CTTTCTCGACGAGAAGGGGCTTCTTGCAGCAGTTGC 2904574 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 74 36 99.2 37 GTCTCAATGGAGTCCGGCCTAGATGGCCGGAACAAT # Left flank : CCACCTTGTTCGCCGCCCTGGAAATCGCCACCGGGAAGGTGACCGGGCTCTGCAAGGACCGGCACCGCCACCAAGAGTTCCTCGGTTTCCTCAAGCATGTGGCCCGTGCCTACCCGGAACAGGAACTACACCTGGTGATGGACAACTACGCCGCGCACAAGCGAGTCGAGGTCCGCAACTGGCTTACAGCAAACCCACGCATCAAGGTCCACTTCACCCCGACGTCGGGGTCATGGTTGAACCTGGTCGAGGTCTGGTTCGGCATCATCGAACGCCAAGCCATCCGACGCGGTACCTTCGTCTCAGTCCGCGAGTTGATCGGCAAGATCCGCGAATTCATCAACAGCTGGAACAACCGGAAACACCCGTTCATCTGGACCAAAACCCCAGACGAAATCCTCGCCAAAATCAACCGCAAACGTAAACTCACCTCAACGCCACGCCACTAGAAGGCCGGATCAATCCTCGGAGGCAGCCAGGCTCCGGCGTCGAATCGGAAA # Right flank : TAGCTCGCCTCGGAAGGCCGCCTTGACTAGGAACTTTACCAGCACCTGCGAGCTCTCCGCACCGCCGGGTCCTATAAAACCACTCTGTTGAGTTGTCATGGGGTAAAACACCTAGTCAAACCCCTTCGAGCGCTCCCTAGGGGAGGCGACATGACCGGAGGTCTCGCAGCGGCTCACACCACCACGGGTCCCTCGTCGGGCAACCTACGCGGTACCCCAAGCATACGGATGTCTGCGTCTTGCGGGGCGCCGAGGTCGATCACCACCACCGAGTCGTAGGCGAGTGCGATCACATCACGAATGTCCCGTTCCCACATTGCGAGTTCAGCCTTGCTCAGGTCACACACGAACACCGAGTACTGGAGCCACTTCCCGTAGCCCTTCATGAGGTTGAAGGTGGCTCGCAGCCGCTTGGGATCCGATATGTCATAGGAAATGAGATATCTTCGTCGGGCCATGGGTCACCTCGTCATCAATGGGGTGTAGGAATCCAGTTCTCC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATGGAGTCCGGCCTAGATGGCCGGAACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-14.60,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA //